RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 FAM205AQ6ZU69 1335 aa29.92■■■□□ 2.38
SSBP4-201ENST00000270061 WNT10BO00744 389 aa29.92■■■□□ 2.38
SSBP4-201ENST00000270061 FGFR2P21802 821 aa29.92■■■□□ 2.38
SSBP4-201ENST00000270061 VEGFBP49765 207 aa29.92■■■□□ 2.38
SSBP4-201ENST00000270061 TLL2Q9Y6L7 1015 aa29.92■■■□□ 2.38
SSBP4-201ENST00000270061 PITPNM2Q9BZ72 1349 aa29.92■■■□□ 2.38
SSBP4-201ENST00000270061 ARAP2Q8WZ64 1704 aa29.91■■■□□ 2.38
SSBP4-201ENST00000270061 EIF5BO60841 1220 aaKnown RBP29.91■■■□□ 2.38
SSBP4-201ENST00000270061 CLASRPQ8N2M8 674 aaKnown RBP29.91■■■□□ 2.38
SSBP4-201ENST00000270061 CEP126Q9P2H0 1117 aa29.91■■■□□ 2.38
SSBP4-201ENST00000270061 SDSP20132 328 aa29.9■■■□□ 2.38
SSBP4-201ENST00000270061 IL15P40933 162 aaPredicted RBP29.9■■■□□ 2.38
SSBP4-201ENST00000270061 ECM29Q5VYK3 1845 aa29.9■■■□□ 2.38
SSBP4-201ENST00000270061 SLC5A1P13866 664 aa29.9■■■□□ 2.38
SSBP4-201ENST00000270061 TBC1D9Q6ZT07 1266 aa29.9■■■□□ 2.38
SSBP4-201ENST00000270061 LPIN2Q92539 896 aa29.9■■■□□ 2.38
SSBP4-201ENST00000270061 F8W031 263 aaPredicted RBP29.89■■■□□ 2.38
SSBP4-201ENST00000270061 FRAT2O75474 233 aaPredicted RBP29.89■■■□□ 2.38
SSBP4-201ENST00000270061 MFSD14BQ5SR56 506 aa29.89■■■□□ 2.38
SSBP4-201ENST00000270061 SAPCD2Q86UD0 394 aa29.89■■■□□ 2.38
SSBP4-201ENST00000270061 IQSEC3Q9UPP2 1182 aaPredicted RBP29.89■■■□□ 2.38
SSBP4-201ENST00000270061 BCAMP50895 628 aa29.88■■■□□ 2.37
SSBP4-201ENST00000270061 TBC1D32Q96NH3 1257 aa29.88■■■□□ 2.37
SSBP4-201ENST00000270061 PAXIP1Q6ZW49 1069 aaPredicted RBP29.87■■■□□ 2.37
SSBP4-201ENST00000270061 DLGAP5Q15398 846 aa29.86■■■□□ 2.37
SSBP4-201ENST00000270061 ATP2B3Q16720 1220 aa29.86■■■□□ 2.37
SSBP4-201ENST00000270061 DDRGK1Q96HY6 314 aa29.86■■■□□ 2.37
SSBP4-201ENST00000270061 TTC41PQ6P2S7 1318 aa29.86■■■□□ 2.37
SSBP4-201ENST00000270061 ZBED3Q96IU2 234 aaPredicted RBP29.85■■■□□ 2.37
SSBP4-201ENST00000270061 WDR33Q9C0J8 1336 aaKnown RBP29.85■■■□□ 2.37
SSBP4-201ENST00000270061 MTMR14Q8NCE2 650 aa29.85■■■□□ 2.37
SSBP4-201ENST00000270061 CDCA5Q96FF9 252 aa29.85■■■□□ 2.37
SSBP4-201ENST00000270061 ECE1P42892 770 aa29.84■■■□□ 2.37
SSBP4-201ENST00000270061 MFAP1P55081 439 aaKnown RBP29.84■■■□□ 2.37
SSBP4-201ENST00000270061 CHAF1AQ13111 956 aaPredicted RBP29.84■■■□□ 2.37
SSBP4-201ENST00000270061 GBA2Q9HCG7 927 aaPredicted RBP29.84■■■□□ 2.37
SSBP4-201ENST00000270061 SCAF8Q9UPN6 1271 aaKnown RBP29.84■■■□□ 2.37
SSBP4-201ENST00000270061 CYP4F22Q6NT55 531 aa29.83■■■□□ 2.37
SSBP4-201ENST00000270061 C2orf69Q8N8R5 385 aa29.83■■■□□ 2.37
SSBP4-201ENST00000270061 HHIPL1Q96JK4 782 aa29.83■■■□□ 2.37
SSBP4-201ENST00000270061 CAPNS2Q96L46 248 aa29.83■■■□□ 2.37
SSBP4-201ENST00000270061 CFAP100Q494V2 611 aa29.82■■■□□ 2.36
SSBP4-201ENST00000270061 PI4K2BQ8TCG2 481 aa29.82■■■□□ 2.36
SSBP4-201ENST00000270061 TBC1D22AQ8WUA7 517 aa29.82■■■□□ 2.36
SSBP4-201ENST00000270061 TTF2Q9UNY4 1162 aaKnown RBP29.82■■■□□ 2.36
SSBP4-201ENST00000270061 HSPA1AP0DMV8 641 aaKnown RBP29.82■■■□□ 2.36
SSBP4-201ENST00000270061 HSPA1BP0DMV9 641 aaKnown RBP29.82■■■□□ 2.36
SSBP4-201ENST00000270061 GRM1Q13255 1194 aa29.82■■■□□ 2.36
SSBP4-201ENST00000270061 TSHZ3Q63HK5 1081 aa29.82■■■□□ 2.36
SSBP4-201ENST00000270061 IFIT2P09913 472 aaKnown RBP29.81■■■□□ 2.36
SSBP4-201ENST00000270061 HUNKP57058 714 aa29.81■■■□□ 2.36
SSBP4-201ENST00000270061 APOBEC3FQ8IUX4 373 aaKnown RBP29.81■■■□□ 2.36
SSBP4-201ENST00000270061 RBM5P52756 815 aaKnown RBP eCLIP29.8■■■□□ 2.361e-11■■■□□ 16.2
SSBP4-201ENST00000270061 CASC1Q6TDU7 716 aa29.8■■■□□ 2.36
SSBP4-201ENST00000270061 C22orf23Q9BZE7 217 aa29.8■■■□□ 2.36
SSBP4-201ENST00000270061 SPDYE2BA6NHP3 402 aa29.8■■■□□ 2.36
SSBP4-201ENST00000270061 MYO1BO43795 1136 aa29.8■■■□□ 2.36
SSBP4-201ENST00000270061 SPDYE6P0CI01 402 aa29.8■■■□□ 2.36
SSBP4-201ENST00000270061 GPATCH3Q96I76 525 aa29.8■■■□□ 2.36
SSBP4-201ENST00000270061 PCDHAC2Q9Y5I4 1007 aa29.8■■■□□ 2.36
SSBP4-201ENST00000270061 AACSQ86V21 672 aa29.79■■■□□ 2.36
SSBP4-201ENST00000270061 EAF2Q96CJ1 260 aaPredicted RBP29.79■■■□□ 2.36
SSBP4-201ENST00000270061 SERPINA10Q9UK55 444 aa29.79■■■□□ 2.36
SSBP4-201ENST00000270061 ERC2O15083 957 aa29.78■■■□□ 2.36
SSBP4-201ENST00000270061 GLRX3O76003 335 aaKnown RBP29.78■■■□□ 2.36
SSBP4-201ENST00000270061 ECHDC1Q9NTX5 307 aa29.78■■■□□ 2.36
SSBP4-201ENST00000270061 THSD7BQ9C0I4 1608 aa29.77■■■□□ 2.36
SSBP4-201ENST00000270061 TFCP2Q12800 502 aa29.77■■■□□ 2.36
SSBP4-201ENST00000270061 PRMT6Q96LA8 375 aaPredicted RBP29.77■■■□□ 2.36
SSBP4-201ENST00000270061 GNL3LQ9NVN8 582 aaKnown RBP29.77■■■□□ 2.36
SSBP4-201ENST00000270061 AKAP2Q9Y2D5 859 aa29.77■■■□□ 2.36
SSBP4-201ENST00000270061 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.77■■■□□ 2.36
SSBP4-201ENST00000270061 PRAMEF18Q5VWM3 479 aa29.77■■■□□ 2.36
SSBP4-201ENST00000270061 RBM25P49756 843 aaKnown RBP29.76■■■□□ 2.35
SSBP4-201ENST00000270061 PAPPA2Q9BXP8 1791 aa29.76■■■□□ 2.35
SSBP4-201ENST00000270061 GRIK5Q16478 980 aa29.75■■■□□ 2.35
SSBP4-201ENST00000270061 TIMM10P62072 90 aa29.75■■■□□ 2.35
SSBP4-201ENST00000270061 WDR66Q8TBY9 1149 aa29.75■■■□□ 2.35
SSBP4-201ENST00000270061 GPR108Q9NPR9 543 aa29.75■■■□□ 2.35
SSBP4-201ENST00000270061 A0A1B0GUL7 405 aa29.74■■■□□ 2.35
SSBP4-201ENST00000270061 CLRN2A0PK11 232 aa29.74■■■□□ 2.35
SSBP4-201ENST00000270061 FKBP1BP68106 108 aa29.74■■■□□ 2.35
SSBP4-201ENST00000270061 SUGT1Q9Y2Z0 365 aa29.74■■■□□ 2.35
SSBP4-201ENST00000270061 COL1A1P02452 1464 aaPredicted RBP29.74■■■□□ 2.35
SSBP4-201ENST00000270061 TRIM6-TRIM34B2RNG4 842 aa29.73■■■□□ 2.35
SSBP4-201ENST00000270061 ADORA1P30542 326 aa29.73■■■□□ 2.35
SSBP4-201ENST00000270061 NF2P35240 595 aa29.73■■■□□ 2.35
SSBP4-201ENST00000270061 PHKA1P46020 1223 aa29.73■■■□□ 2.35
SSBP4-201ENST00000270061 CRKP46108 304 aa29.73■■■□□ 2.35
SSBP4-201ENST00000270061 MAP2K1Q02750 393 aaPredicted RBP29.73■■■□□ 2.35
SSBP4-201ENST00000270061 TNNI3KQ59H18 835 aa29.72■■■□□ 2.35
SSBP4-201ENST00000270061 RGMBQ6NW40 437 aa29.72■■■□□ 2.35
SSBP4-201ENST00000270061 DEFB129Q9H1M3 183 aa29.72■■■□□ 2.35
SSBP4-201ENST00000270061 VEZTQ9HBM0 779 aa29.72■■■□□ 2.35
SSBP4-201ENST00000270061 FPGT-TNNI3KV9GXZ4 949 aa29.72■■■□□ 2.35
SSBP4-201ENST00000270061 AOC2O75106 756 aa29.72■■■□□ 2.35
SSBP4-201ENST00000270061 MAP2K2P36507 400 aa29.72■■■□□ 2.35
SSBP4-201ENST00000270061 HDLBPQ00341 1268 aaKnown RBP29.72■■■□□ 2.35
SSBP4-201ENST00000270061 CCDC102BQ68D86 513 aa29.72■■■□□ 2.35
SSBP4-201ENST00000270061 AIDAQ96BJ3 306 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms