RNA–Protein interactions for RNA: ENST00000268638.9

IRF8-201, Transcript of interferon regulatory factor 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF8, Length 3,030 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF8-201ENST00000268638 SPC24Q8NBT2 197 aa17.76■□□□□ 0.43
IRF8-201ENST00000268638 ERCC4Q92889 916 aaPredicted RBP17.76■□□□□ 0.43
IRF8-201ENST00000268638 ARMT1Q9H993 441 aa17.76■□□□□ 0.43
IRF8-201ENST00000268638 ORC3Q9UBD5 711 aaPredicted RBP17.76■□□□□ 0.43
IRF8-201ENST00000268638 KIF3AQ9Y496 699 aa17.76■□□□□ 0.43
IRF8-201ENST00000268638 PRKAB2O43741 272 aa17.75■□□□□ 0.43
IRF8-201ENST00000268638 ZNF500O60304 480 aaPredicted RBP17.75■□□□□ 0.43
IRF8-201ENST00000268638 TRDNQ13061 729 aa17.75■□□□□ 0.43
IRF8-201ENST00000268638 BICDL1Q6ZP65 573 aa17.75■□□□□ 0.43
IRF8-201ENST00000268638 C17orf53Q8N3J3 647 aaPredicted RBP17.75■□□□□ 0.43
IRF8-201ENST00000268638 STRBPQ96SI9 672 aaKnown RBP17.75■□□□□ 0.43
IRF8-201ENST00000268638 MYL10Q9BUA6 226 aa17.75■□□□□ 0.43
IRF8-201ENST00000268638 DDX19AQ9NUU7 478 aaKnown RBP17.75■□□□□ 0.43
IRF8-201ENST00000268638 MBD4O95243 580 aa17.75■□□□□ 0.43
IRF8-201ENST00000268638 UQCRFS1P1P0C7P4 283 aa17.75■□□□□ 0.43
IRF8-201ENST00000268638 CTDSPL2Q05D32 466 aa17.75■□□□□ 0.43
IRF8-201ENST00000268638 PTF1AQ7RTS3 328 aa17.75■□□□□ 0.43
IRF8-201ENST00000268638 CCAR1Q8IX12 1150 aaKnown RBP17.75■□□□□ 0.43
IRF8-201ENST00000268638 MYH3P11055 1940 aa17.75■□□□□ 0.43
IRF8-201ENST00000268638 OFD1O75665 1012 aa17.74■□□□□ 0.43
IRF8-201ENST00000268638 C8orf76Q96K31 380 aa17.74■□□□□ 0.43
IRF8-201ENST00000268638 EPB41L4AQ9HCS5 686 aaPredicted RBP17.74■□□□□ 0.43
IRF8-201ENST00000268638 PODXL2Q9NZ53 605 aa17.74■□□□□ 0.43
IRF8-201ENST00000268638 RCOR1Q9UKL0 485 aa17.74■□□□□ 0.43
IRF8-201ENST00000268638 NEDD4P46934 1319 aa17.74■□□□□ 0.43
IRF8-201ENST00000268638 NTSR2O95665 410 aa17.74■□□□□ 0.43
IRF8-201ENST00000268638 ME1P48163 572 aa17.74■□□□□ 0.43
IRF8-201ENST00000268638 C3orf67Q6ZVT6 689 aa17.74■□□□□ 0.43
IRF8-201ENST00000268638 FAM200AQ8TCP9 573 aa17.74■□□□□ 0.43
IRF8-201ENST00000268638 FAM98CQ17RN3 349 aaKnown RBP17.74■□□□□ 0.43
IRF8-201ENST00000268638 FBXL16Q8N461 479 aa17.74■□□□□ 0.43
IRF8-201ENST00000268638 MIGA1Q8NAN2 632 aa17.74■□□□□ 0.43
IRF8-201ENST00000268638 DNAJC25Q9H1X3 360 aa17.74■□□□□ 0.43
IRF8-201ENST00000268638 ANKRD36CQ5JPF3 1778 aa17.74■□□□□ 0.43
IRF8-201ENST00000268638 CCDC152Q4G0S7 254 aa17.73■□□□□ 0.43
IRF8-201ENST00000268638 MICU3Q86XE3 530 aa17.73■□□□□ 0.43
IRF8-201ENST00000268638 CDCA7Q9BWT1 371 aaPredicted RBP17.73■□□□□ 0.43
IRF8-201ENST00000268638 CBX8Q9HC52 389 aa17.73■□□□□ 0.43
IRF8-201ENST00000268638 R3HCC1Q9Y3T6 440 aaKnown RBP17.73■□□□□ 0.43
IRF8-201ENST00000268638 TACC3Q9Y6A5 838 aa17.73■□□□□ 0.43
IRF8-201ENST00000268638 UBE2Q2LH0YL09 131 aa17.73■□□□□ 0.43
IRF8-201ENST00000268638 MYH14Q7Z406 1995 aaKnown RBP17.73■□□□□ 0.43
IRF8-201ENST00000268638 SPATA31A5Q5VU36 1347 aa17.72■□□□□ 0.43
IRF8-201ENST00000268638 SPATA31A7Q8IWB4 1347 aa17.72■□□□□ 0.43
IRF8-201ENST00000268638 IGHMBP2P38935 993 aaKnown RBP17.72■□□□□ 0.43
IRF8-201ENST00000268638 CHRNDQ07001 517 aa17.72■□□□□ 0.43
IRF8-201ENST00000268638 PHKBQ93100 1093 aa17.72■□□□□ 0.43
IRF8-201ENST00000268638 ARID3AQ99856 593 aa17.72■□□□□ 0.43
IRF8-201ENST00000268638 CLIC4Q9Y696 253 aa17.72■□□□□ 0.43
IRF8-201ENST00000268638 FBXW7Q969H0 707 aa17.72■□□□□ 0.43
IRF8-201ENST00000268638 ANGEL1Q9UNK9 670 aaKnown RBP17.72■□□□□ 0.43
IRF8-201ENST00000268638 KIF28PB7ZC32 967 aa17.72■□□□□ 0.43
IRF8-201ENST00000268638 MAP3K12Q12852 859 aa17.72■□□□□ 0.43
IRF8-201ENST00000268638 SASS6Q6UVJ0 657 aa17.72■□□□□ 0.43
IRF8-201ENST00000268638 IFNL3Q8IZI9 196 aa17.72■□□□□ 0.43
IRF8-201ENST00000268638 THRAP3Q9Y2W1 955 aaKnown RBP17.72■□□□□ 0.43
IRF8-201ENST00000268638 CDC27P30260 824 aa17.71■□□□□ 0.43
IRF8-201ENST00000268638 LCORLQ8N3X6 602 aa17.71■□□□□ 0.43
IRF8-201ENST00000268638 FBXO18Q8NFZ0 1043 aa17.71■□□□□ 0.43
IRF8-201ENST00000268638 ZNF396Q96N95 335 aaPredicted RBP17.71■□□□□ 0.43
IRF8-201ENST00000268638 NAPBQ9H115 298 aa17.71■□□□□ 0.43
IRF8-201ENST00000268638 SNW1Q13573 536 aaKnown RBP17.71■□□□□ 0.43
IRF8-201ENST00000268638 ERFEQ4G0M1 354 aa17.71■□□□□ 0.43
IRF8-201ENST00000268638 PARP10Q53GL7 1025 aa17.71■□□□□ 0.43
IRF8-201ENST00000268638 RRP12Q5JTH9 1297 aaKnown RBP17.71■□□□□ 0.43
IRF8-201ENST00000268638 RBM43Q6ZSC3 357 aaKnown RBP17.71■□□□□ 0.43
IRF8-201ENST00000268638 CCDC24Q8N4L8 307 aa17.71■□□□□ 0.43
IRF8-201ENST00000268638 ZKSCAN3Q9BRR0 538 aa17.71■□□□□ 0.43
IRF8-201ENST00000268638 TOMM22Q9NS69 142 aa17.71■□□□□ 0.43
IRF8-201ENST00000268638 COL4A1P02462 1669 aa17.7■□□□□ 0.42
IRF8-201ENST00000268638 DHX16O60231 1041 aaKnown RBP17.7■□□□□ 0.42
IRF8-201ENST00000268638 FSIP1Q8NA03 581 aa17.7■□□□□ 0.42
IRF8-201ENST00000268638 ABCF2Q9UG63 623 aa17.7■□□□□ 0.42
IRF8-201ENST00000268638 PCDHA7Q9UN72 937 aa17.7■□□□□ 0.42
IRF8-201ENST00000268638 MYH7P12883 1935 aa17.7■□□□□ 0.42
IRF8-201ENST00000268638 AHDC1Q5TGY3 1603 aaPredicted RBP17.7■□□□□ 0.42
IRF8-201ENST00000268638 SMIM22K7EJ46 135 aa17.7■□□□□ 0.42
IRF8-201ENST00000268638 SH2B2O14492 632 aaPredicted RBP17.7■□□□□ 0.42
IRF8-201ENST00000268638 GYG1P46976 350 aa17.7■□□□□ 0.42
IRF8-201ENST00000268638 METAP2P50579 478 aaKnown RBP eCLIP17.7■□□□□ 0.42
IRF8-201ENST00000268638 FAM182BQ5T319 152 aa17.7■□□□□ 0.42
IRF8-201ENST00000268638 NFXL1Q6ZNB6 911 aa17.7■□□□□ 0.42
IRF8-201ENST00000268638 LINC00116Q8NCU8 138 aa17.7■□□□□ 0.42
IRF8-201ENST00000268638 PLCH1Q4KWH8 1693 aa17.7■□□□□ 0.42
IRF8-201ENST00000268638 A0A1B0GVL5 298 aa17.69■□□□□ 0.42
IRF8-201ENST00000268638 ZNF165P49910 485 aa17.69■□□□□ 0.42
IRF8-201ENST00000268638 APOA5Q6Q788 366 aa17.69■□□□□ 0.42
IRF8-201ENST00000268638 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.69■□□□□ 0.42
IRF8-201ENST00000268638 AK7Q96M32 723 aa17.69■□□□□ 0.42
IRF8-201ENST00000268638 ZSWIM5Q9P217 1185 aa17.69■□□□□ 0.42
IRF8-201ENST00000268638 LRP2BPQ9P2M1 347 aa17.69■□□□□ 0.42
IRF8-201ENST00000268638 GSG1L2A8MUP6 293 aa17.69■□□□□ 0.42
IRF8-201ENST00000268638 PATL2C9JE40 543 aaKnown RBP17.69■□□□□ 0.42
IRF8-201ENST00000268638 ATRNO75882 1429 aa17.69■□□□□ 0.42
IRF8-201ENST00000268638 RBM10P98175 930 aaKnown RBP17.69■□□□□ 0.42
IRF8-201ENST00000268638 CCDC73Q6ZRK6 1079 aa17.69■□□□□ 0.42
IRF8-201ENST00000268638 IGDCC4Q8TDY8 1250 aa17.69■□□□□ 0.42
IRF8-201ENST00000268638 TMEM67Q5HYA8 995 aa17.68■□□□□ 0.42
IRF8-201ENST00000268638 C11orf57Q6ZUT1 292 aaPredicted RBP17.68■□□□□ 0.42
IRF8-201ENST00000268638 ADGRA1Q86SQ6 560 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms