RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 IL27Q8NEV9 243 aa10.95□□□□□ -0.66
SSR3-201ENST00000265044 LRP6O75581 1613 aa10.94□□□□□ -0.66
SSR3-201ENST00000265044 ALDH1B1P30837 517 aa10.94□□□□□ -0.66
SSR3-201ENST00000265044 L1TD1Q5T7N2 865 aaKnown RBP10.94□□□□□ -0.66
SSR3-201ENST00000265044 ZSCAN29Q8IWY8 852 aaPredicted RBP10.94□□□□□ -0.66
SSR3-201ENST00000265044 MPNDQ8N594 471 aa10.94□□□□□ -0.66
SSR3-201ENST00000265044 WDR66Q8TBY9 1149 aa10.94□□□□□ -0.66
SSR3-201ENST00000265044 BICD2Q8TD16 824 aa10.94□□□□□ -0.66
SSR3-201ENST00000265044 MCM9Q9NXL9 1143 aa10.94□□□□□ -0.66
SSR3-201ENST00000265044 TPCN1Q9ULQ1 816 aa10.94□□□□□ -0.66
SSR3-201ENST00000265044 PRDM1O75626 825 aa10.94□□□□□ -0.66
SSR3-201ENST00000265044 BBOX1O75936 387 aa10.94□□□□□ -0.66
SSR3-201ENST00000265044 PIBF1Q8WXW3 757 aa10.94□□□□□ -0.66
SSR3-201ENST00000265044 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.94□□□□□ -0.66
SSR3-201ENST00000265044 PATL2C9JE40 543 aaKnown RBP10.94□□□□□ -0.66
SSR3-201ENST00000265044 PRKAB2O43741 272 aa10.94□□□□□ -0.66
SSR3-201ENST00000265044 SYT1P21579 422 aa10.94□□□□□ -0.66
SSR3-201ENST00000265044 IFNL3Q8IZI9 196 aa10.94□□□□□ -0.66
SSR3-201ENST00000265044 FAM84BQ96KN1 310 aaPredicted RBP10.94□□□□□ -0.66
SSR3-201ENST00000265044 NCOA5Q9HCD5 579 aaKnown RBP10.94□□□□□ -0.66
SSR3-201ENST00000265044 LEMD3Q9Y2U8 911 aa10.94□□□□□ -0.66
SSR3-201ENST00000265044 ATP2B1P20020 1258 aa10.93□□□□□ -0.66
SSR3-201ENST00000265044 GTF2IP78347 998 aa10.93□□□□□ -0.66
SSR3-201ENST00000265044 C2CD5Q86YS7 1000 aa10.93□□□□□ -0.66
SSR3-201ENST00000265044 ABCC12Q96J65 1359 aa10.93□□□□□ -0.66
SSR3-201ENST00000265044 WTIPA6NIX2 430 aaPredicted RBP10.93□□□□□ -0.66
SSR3-201ENST00000265044 TSPY2A6NKD2 308 aa10.93□□□□□ -0.66
SSR3-201ENST00000265044 KRT85P78386 507 aa10.93□□□□□ -0.66
SSR3-201ENST00000265044 GSTO1P78417 241 aa10.93□□□□□ -0.66
SSR3-201ENST00000265044 ATP2B2Q01814 1243 aa10.93□□□□□ -0.66
SSR3-201ENST00000265044 SLF2Q8IX21 1173 aa10.93□□□□□ -0.66
SSR3-201ENST00000265044 TRIM22Q8IYM9 498 aa10.93□□□□□ -0.66
SSR3-201ENST00000265044 KRT23Q9C075 422 aa10.93□□□□□ -0.66
SSR3-201ENST00000265044 AFDNP55196 1824 aaKnown RBP10.93□□□□□ -0.66
SSR3-201ENST00000265044 GOLGA8AA7E2F4 631 aa10.93□□□□□ -0.66
SSR3-201ENST00000265044 ATP2B4P23634 1241 aa10.93□□□□□ -0.66
SSR3-201ENST00000265044 ARID4AP29374 1257 aaPredicted RBP10.93□□□□□ -0.66
SSR3-201ENST00000265044 METAP2P50579 478 aaKnown RBP eCLIP10.93□□□□□ -0.66
SSR3-201ENST00000265044 SAFBQ15424 915 aaKnown RBP eCLIP10.93□□□□□ -0.66
SSR3-201ENST00000265044 SLC10A5Q5PT55 438 aa10.93□□□□□ -0.66
SSR3-201ENST00000265044 MFSD14BQ5SR56 506 aa10.93□□□□□ -0.66
SSR3-201ENST00000265044 ESR2Q92731 530 aa10.93□□□□□ -0.66
SSR3-201ENST00000265044 TFIP11Q9UBB9 837 aaKnown RBP10.93□□□□□ -0.66
SSR3-201ENST00000265044 TAF6LQ9Y6J9 622 aa10.93□□□□□ -0.66
SSR3-201ENST00000265044 ZSCAN22P10073 491 aaPredicted RBP10.92□□□□□ -0.66
SSR3-201ENST00000265044 HMGN5P82970 282 aaKnown RBP10.92□□□□□ -0.66
SSR3-201ENST00000265044 DOK7Q18PE1 504 aa10.92□□□□□ -0.66
SSR3-201ENST00000265044 ZNF444Q8N0Y2 327 aaPredicted RBP10.92□□□□□ -0.66
SSR3-201ENST00000265044 LCORLQ8N3X6 602 aa10.92□□□□□ -0.66
SSR3-201ENST00000265044 TRIM44Q96DX7 344 aaPredicted RBP10.92□□□□□ -0.66
SSR3-201ENST00000265044 CNNM2Q9H8M5 875 aa10.92□□□□□ -0.66
SSR3-201ENST00000265044 ORC3Q9UBD5 711 aaPredicted RBP10.92□□□□□ -0.66
SSR3-201ENST00000265044 PPEF1O14829 653 aaPredicted RBP10.92□□□□□ -0.66
SSR3-201ENST00000265044 ONECUT3O60422 494 aaPredicted RBP10.92□□□□□ -0.66
SSR3-201ENST00000265044 CDKL5O76039 1030 aa10.92□□□□□ -0.66
SSR3-201ENST00000265044 LARGE1O95461 756 aa10.92□□□□□ -0.66
SSR3-201ENST00000265044 PRDX5P30044 214 aa10.92□□□□□ -0.66
SSR3-201ENST00000265044 DYNLL1P63167 89 aaKnown RBP10.92□□□□□ -0.66
SSR3-201ENST00000265044 PICALMQ13492 652 aa10.92□□□□□ -0.66
SSR3-201ENST00000265044 WTAPQ15007 396 aa10.92□□□□□ -0.66
SSR3-201ENST00000265044 AMIGO3Q86WK7 504 aa10.92□□□□□ -0.66
SSR3-201ENST00000265044 COL23A1Q86Y22 540 aaPredicted RBP10.92□□□□□ -0.66
SSR3-201ENST00000265044 PDE4BQ07343 736 aa10.92□□□□□ -0.66
SSR3-201ENST00000265044 EZH2Q15910 746 aaKnown RBP10.92□□□□□ -0.66
SSR3-201ENST00000265044 CHAMP1Q96JM3 812 aa10.92□□□□□ -0.66
SSR3-201ENST00000265044 ZBTB43O43298 467 aa10.91□□□□□ -0.66
SSR3-201ENST00000265044 DEFB132Q7Z7B7 95 aa10.91□□□□□ -0.66
SSR3-201ENST00000265044 C8orf76Q96K31 380 aa10.91□□□□□ -0.66
SSR3-201ENST00000265044 EYA3Q99504 573 aa10.91□□□□□ -0.66
SSR3-201ENST00000265044 USP17L12C9JPN9 530 aa10.91□□□□□ -0.66
SSR3-201ENST00000265044 USP17L21D6R901 530 aa10.91□□□□□ -0.66
SSR3-201ENST00000265044 JAK2O60674 1132 aa10.91□□□□□ -0.66
SSR3-201ENST00000265044 KLRK1P26718 216 aa10.91□□□□□ -0.66
SSR3-201ENST00000265044 STRBPQ96SI9 672 aaKnown RBP10.91□□□□□ -0.66
SSR3-201ENST00000265044 ABCA3Q99758 1704 aa10.91□□□□□ -0.66
SSR3-201ENST00000265044 MBD3O95983 291 aa10.91□□□□□ -0.66
SSR3-201ENST00000265044 FGFR2P21802 821 aa10.91□□□□□ -0.66
SSR3-201ENST00000265044 PLCH1Q4KWH8 1693 aa10.9□□□□□ -0.66
SSR3-201ENST00000265044 VGLL2Q8N8G2 317 aa10.9□□□□□ -0.66
SSR3-201ENST00000265044 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.9□□□□□ -0.66
SSR3-201ENST00000265044 STX8Q9UNK0 236 aa10.9□□□□□ -0.66
SSR3-201ENST00000265044 VIRMAQ69YN4 1812 aaKnown RBP10.9□□□□□ -0.66
SSR3-201ENST00000265044 MED23Q9ULK4 1368 aa10.9□□□□□ -0.66
SSR3-201ENST00000265044 DOT1LQ8TEK3 1739 aa10.9□□□□□ -0.66
SSR3-201ENST00000265044 PTPDC1A2A3K4 754 aa10.9□□□□□ -0.66
SSR3-201ENST00000265044 IARSP41252 1262 aaKnown RBP10.9□□□□□ -0.66
SSR3-201ENST00000265044 AKNAD1Q5T1N1 836 aa10.9□□□□□ -0.66
SSR3-201ENST00000265044 SPATA32Q96LK8 384 aa10.9□□□□□ -0.66
SSR3-201ENST00000265044 MYL10Q9BUA6 226 aa10.9□□□□□ -0.66
SSR3-201ENST00000265044 SAP30BPQ9UHR5 308 aaKnown RBP10.9□□□□□ -0.66
SSR3-201ENST00000265044 ANGEL1Q9UNK9 670 aaKnown RBP10.9□□□□□ -0.66
SSR3-201ENST00000265044 A0A0G2JLW4 131 aa10.89□□□□□ -0.67
SSR3-201ENST00000265044 SEMA3EO15041 775 aa10.89□□□□□ -0.67
SSR3-201ENST00000265044 XBP1P17861 261 aa10.89□□□□□ -0.67
SSR3-201ENST00000265044 GPSM2P81274 684 aa10.89□□□□□ -0.67
SSR3-201ENST00000265044 MECOMQ03112 1051 aa10.89□□□□□ -0.67
SSR3-201ENST00000265044 DIXDC1Q155Q3 683 aa10.89□□□□□ -0.67
SSR3-201ENST00000265044 CRYBG1Q9Y4K1 1723 aa10.89□□□□□ -0.67
SSR3-201ENST00000265044 F13A1P00488 732 aa10.89□□□□□ -0.67
SSR3-201ENST00000265044 DNM1Q05193 864 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms