RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 COL1A1P02452 1464 aaPredicted RBP19.99■□□□□ 0.79
USE1-201ENST00000263897 PRKG1Q13976 671 aa19.98■□□□□ 0.79
USE1-201ENST00000263897 SPDYE2Q495Y8 402 aa19.98■□□□□ 0.79
USE1-201ENST00000263897 ARMC9Q7Z3E5 817 aa19.98■□□□□ 0.79
USE1-201ENST00000263897 CSRNP1Q96S65 589 aa19.98■□□□□ 0.79
USE1-201ENST00000263897 TDRD3Q9H7E2 651 aaKnown RBP19.98■□□□□ 0.79
USE1-201ENST00000263897 SUGT1Q9Y2Z0 365 aa19.98■□□□□ 0.79
USE1-201ENST00000263897 SUPT20HL1Q3ZLR7 823 aa19.97■□□□□ 0.79
USE1-201ENST00000263897 LDLRAD1Q5T700 205 aa19.97■□□□□ 0.79
USE1-201ENST00000263897 REM2Q8IYK8 340 aaPredicted RBP19.97■□□□□ 0.79
USE1-201ENST00000263897 WDR66Q8TBY9 1149 aa19.97■□□□□ 0.79
USE1-201ENST00000263897 RASA3Q14644 834 aa19.96■□□□□ 0.79
USE1-201ENST00000263897 TEKT1Q969V4 418 aa19.96■□□□□ 0.79
USE1-201ENST00000263897 GNL3LQ9NVN8 582 aaKnown RBP19.96■□□□□ 0.79
USE1-201ENST00000263897 ANGEL1Q9UNK9 670 aaKnown RBP19.96■□□□□ 0.79
USE1-201ENST00000263897 ARAP2Q8WZ64 1704 aa19.96■□□□□ 0.79
USE1-201ENST00000263897 TIMM10P62072 90 aa19.95■□□□□ 0.78
USE1-201ENST00000263897 TNFAIP1Q13829 316 aa19.95■□□□□ 0.78
USE1-201ENST00000263897 MAP3K11Q16584 847 aa19.95■□□□□ 0.78
USE1-201ENST00000263897 NBPF12Q5TAG4 269 aaPredicted RBP19.95■□□□□ 0.78
USE1-201ENST00000263897 PPP1R12BO60237 982 aaPredicted RBP19.94■□□□□ 0.78
USE1-201ENST00000263897 TFCP2Q12800 502 aa19.94■□□□□ 0.78
USE1-201ENST00000263897 ZDHHC15Q96MV8 337 aa19.94■□□□□ 0.78
USE1-201ENST00000263897 RNF186Q9NXI6 227 aa19.94■□□□□ 0.78
USE1-201ENST00000263897 FZD1Q9UP38 647 aa19.94■□□□□ 0.78
USE1-201ENST00000263897 AKAP2Q9Y2D5 859 aa19.94■□□□□ 0.78
USE1-201ENST00000263897 MAST3O60307 1309 aa19.94■□□□□ 0.78
USE1-201ENST00000263897 PNMA6EA0A0J9YXQ4 647 aa19.93■□□□□ 0.78
USE1-201ENST00000263897 SEMA3EO15041 775 aa19.93■□□□□ 0.78
USE1-201ENST00000263897 ZBTB22O15209 634 aa19.93■□□□□ 0.78
USE1-201ENST00000263897 ADORA1P30542 326 aa19.93■□□□□ 0.78
USE1-201ENST00000263897 PHKA1P46020 1223 aa19.93■□□□□ 0.78
USE1-201ENST00000263897 HHIPL2Q6UWX4 724 aa19.93■□□□□ 0.78
USE1-201ENST00000263897 FTSJ3Q8IY81 847 aaKnown RBP19.93■□□□□ 0.78
USE1-201ENST00000263897 SAGE1Q9NXZ1 904 aa19.93■□□□□ 0.78
USE1-201ENST00000263897 AKAP11Q9UKA4 1901 aa19.93■□□□□ 0.78
USE1-201ENST00000263897 CASP8AP2Q9UKL3 1982 aa19.93■□□□□ 0.78
USE1-201ENST00000263897 MYH13Q9UKX3 1938 aa19.92■□□□□ 0.78
USE1-201ENST00000263897 TCP10L2B9ZVM9 353 aa19.92■□□□□ 0.78
USE1-201ENST00000263897 TRPA1O75762 1119 aa19.92■□□□□ 0.78
USE1-201ENST00000263897 RLBP1P12271 317 aa19.92■□□□□ 0.78
USE1-201ENST00000263897 CCDC102BQ68D86 513 aa19.92■□□□□ 0.78
USE1-201ENST00000263897 APOBEC3HQ6NTF7 200 aaKnown RBP19.92■□□□□ 0.78
USE1-201ENST00000263897 DENND2AQ9ULE3 1009 aa19.92■□□□□ 0.78
USE1-201ENST00000263897 A0A1B0GUL7 405 aa19.91■□□□□ 0.78
USE1-201ENST00000263897 UNCXA6NJT0 531 aa19.91■□□□□ 0.78
USE1-201ENST00000263897 ZBTB7BO15156 539 aaPredicted RBP19.91■□□□□ 0.78
USE1-201ENST00000263897 USP2O75604 605 aaPredicted RBP19.91■□□□□ 0.78
USE1-201ENST00000263897 TNNI2P48788 182 aa19.91■□□□□ 0.78
USE1-201ENST00000263897 ATP8B2P98198 1209 aa19.91■□□□□ 0.78
USE1-201ENST00000263897 G3BP1Q13283 466 aaKnown RBP eCLIP19.91■□□□□ 0.78
USE1-201ENST00000263897 SLC10A4Q96EP9 437 aa19.91■□□□□ 0.78
USE1-201ENST00000263897 TEPSINQ96N21 525 aa19.91■□□□□ 0.78
USE1-201ENST00000263897 SSC5DA1L4H1 1573 aa19.91■□□□□ 0.78
USE1-201ENST00000263897 CAPN15O75808 1086 aa19.9■□□□□ 0.78
USE1-201ENST00000263897 TM4SF4P48230 202 aa19.9■□□□□ 0.78
USE1-201ENST00000263897 ITPRIPQ8IWB1 547 aa19.9■□□□□ 0.78
USE1-201ENST00000263897 XAGE2Q96GT9 111 aa19.9■□□□□ 0.78
USE1-201ENST00000263897 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.9■□□□□ 0.78
USE1-201ENST00000263897 SALL1Q9NSC2 1324 aa19.9■□□□□ 0.78
USE1-201ENST00000263897 LDHBP07195 334 aaKnown RBP19.89■□□□□ 0.77
USE1-201ENST00000263897 IREB2P48200 963 aaKnown RBP19.89■□□□□ 0.77
USE1-201ENST00000263897 POLA2Q14181 598 aa19.89■□□□□ 0.77
USE1-201ENST00000263897 FKBP1CQ5VVH2 108 aa19.89■□□□□ 0.77
USE1-201ENST00000263897 SPRYD7Q5W111 196 aa19.89■□□□□ 0.77
USE1-201ENST00000263897 SSH3Q8TE77 659 aa19.89■□□□□ 0.77
USE1-201ENST00000263897 NEUROD6Q96NK8 337 aa19.89■□□□□ 0.77
USE1-201ENST00000263897 TMEM39BQ9GZU3 492 aa19.89■□□□□ 0.77
USE1-201ENST00000263897 PRDX5P30044 214 aa19.88■□□□□ 0.77
USE1-201ENST00000263897 CACNB3P54284 484 aa19.88■□□□□ 0.77
USE1-201ENST00000263897 MKRN3Q13064 507 aaKnown RBP19.88■□□□□ 0.77
USE1-201ENST00000263897 CDAN1Q8IWY9 1227 aa19.88■□□□□ 0.77
USE1-201ENST00000263897 CLMNQ96JQ2 1002 aa19.88■□□□□ 0.77
USE1-201ENST00000263897 TMOD2Q9NZR1 351 aa19.88■□□□□ 0.77
USE1-201ENST00000263897 RASGRF1Q13972 1273 aa19.87■□□□□ 0.77
USE1-201ENST00000263897 MVPQ14764 893 aaKnown RBP19.87■□□□□ 0.77
USE1-201ENST00000263897 FAM83AQ86UY5 434 aa19.87■□□□□ 0.77
USE1-201ENST00000263897 PDS5AQ29RF7 1337 aaKnown RBP19.86■□□□□ 0.77
USE1-201ENST00000263897 DIXDC1Q155Q3 683 aa19.86■□□□□ 0.77
USE1-201ENST00000263897 ANKRD13AQ8IZ07 590 aa19.86■□□□□ 0.77
USE1-201ENST00000263897 ZGPATQ8N5A5 531 aaKnown RBP19.86■□□□□ 0.77
USE1-201ENST00000263897 C1orf115Q9H7X2 142 aa19.86■□□□□ 0.77
USE1-201ENST00000263897 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.86■□□□□ 0.77
USE1-201ENST00000263897 DAGLAQ9Y4D2 1042 aa19.86■□□□□ 0.77
USE1-201ENST00000263897 SREBF2Q12772 1141 aa19.85■□□□□ 0.77
USE1-201ENST00000263897 PANK1Q8TE04 598 aa19.85■□□□□ 0.77
USE1-201ENST00000263897 WNK4Q96J92 1243 aa19.85■□□□□ 0.77
USE1-201ENST00000263897 ZBTB48P10074 688 aaPredicted RBP19.84■□□□□ 0.77
USE1-201ENST00000263897 MS4A1P11836 297 aa19.84■□□□□ 0.77
USE1-201ENST00000263897 INHBEP58166 350 aa19.84■□□□□ 0.77
USE1-201ENST00000263897 GORABQ5T7V8 394 aa19.84■□□□□ 0.77
USE1-201ENST00000263897 CDC42EP5Q6NZY7 148 aa19.84■□□□□ 0.77
USE1-201ENST00000263897 ABHD8Q96I13 439 aa19.84■□□□□ 0.77
USE1-201ENST00000263897 MANSC4A6NHS7 340 aaPredicted RBP19.83■□□□□ 0.77
USE1-201ENST00000263897 SURF6O75683 361 aaKnown RBP19.83■□□□□ 0.77
USE1-201ENST00000263897 SPTY2D1Q68D10 685 aaPredicted RBP19.83■□□□□ 0.77
USE1-201ENST00000263897 GPR108Q9NPR9 543 aa19.83■□□□□ 0.77
USE1-201ENST00000263897 ABCF2Q9UG63 623 aa19.83■□□□□ 0.77
USE1-201ENST00000263897 NOP58Q9Y2X3 529 aaKnown RBP19.83■□□□□ 0.77
USE1-201ENST00000263897 TBC1D8O95759 1140 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms