RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 GYG1P46976 350 aa11.32□□□□□ -0.6
LCN1-201ENST00000263598 MAP3K9P80192 1104 aa11.32□□□□□ -0.6
LCN1-201ENST00000263598 VGLL4Q14135 290 aa11.32□□□□□ -0.6
LCN1-201ENST00000263598 TAF1CQ15572 869 aaPredicted RBP11.32□□□□□ -0.6
LCN1-201ENST00000263598 CCL15Q16663 113 aa11.32□□□□□ -0.6
LCN1-201ENST00000263598 EPHA10Q5JZY3 1008 aa11.32□□□□□ -0.6
LCN1-201ENST00000263598 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.32□□□□□ -0.6
LCN1-201ENST00000263598 VPS37DQ86XT2 251 aa11.32□□□□□ -0.6
LCN1-201ENST00000263598 MKI67P46013 3256 aaKnown RBP11.31□□□□□ -0.6
LCN1-201ENST00000263598 CENPFP49454 3210 aa11.31□□□□□ -0.6
LCN1-201ENST00000263598 FRAT2O75474 233 aaPredicted RBP11.31□□□□□ -0.6
LCN1-201ENST00000263598 ALDH1L1O75891 902 aa11.31□□□□□ -0.6
LCN1-201ENST00000263598 SLC9C1Q4G0N8 1177 aa11.31□□□□□ -0.6
LCN1-201ENST00000263598 CAVIN4Q5BKX8 364 aa11.31□□□□□ -0.6
LCN1-201ENST00000263598 SLC4A10Q6U841 1118 aa11.31□□□□□ -0.6
LCN1-201ENST00000263598 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.31□□□□□ -0.6
LCN1-201ENST00000263598 BRI3BPQ8WY22 251 aa11.31□□□□□ -0.6
LCN1-201ENST00000263598 OTUD5Q96G74 571 aa11.31□□□□□ -0.6
LCN1-201ENST00000263598 ZNF333Q96JL9 665 aa11.31□□□□□ -0.6
LCN1-201ENST00000263598 FAM84BQ96KN1 310 aaPredicted RBP11.31□□□□□ -0.6
LCN1-201ENST00000263598 TEPSINQ96N21 525 aa11.31□□□□□ -0.6
LCN1-201ENST00000263598 TMEM39BQ9GZU3 492 aa11.31□□□□□ -0.6
LCN1-201ENST00000263598 SALL2Q9Y467 1007 aaPredicted RBP11.31□□□□□ -0.6
LCN1-201ENST00000263598 MROH5Q6ZUA9 1318 aa11.31□□□□□ -0.6
LCN1-201ENST00000263598 A0A1B0GUL6 1792 aa11.31□□□□□ -0.6
LCN1-201ENST00000263598 HDLBPQ00341 1268 aaKnown RBP11.3□□□□□ -0.6
LCN1-201ENST00000263598 KIF22Q14807 665 aa11.3□□□□□ -0.6
LCN1-201ENST00000263598 SLC4A8Q2Y0W8 1093 aa11.3□□□□□ -0.6
LCN1-201ENST00000263598 TBC1D22AQ8WUA7 517 aa11.3□□□□□ -0.6
LCN1-201ENST00000263598 CNKSR2Q8WXI2 1034 aa11.3□□□□□ -0.6
LCN1-201ENST00000263598 HOOK2Q96ED9 719 aa11.3□□□□□ -0.6
LCN1-201ENST00000263598 SRCIN1Q9C0H9 1055 aa11.3□□□□□ -0.6
LCN1-201ENST00000263598 TMOD2Q9NZR1 351 aa11.3□□□□□ -0.6
LCN1-201ENST00000263598 CACNA1FO60840 1977 aa11.3□□□□□ -0.6
LCN1-201ENST00000263598 BRCA2P51587 3418 aa11.29□□□□□ -0.6
LCN1-201ENST00000263598 CETPP11597 493 aa11.29□□□□□ -0.6
LCN1-201ENST00000263598 CDAN1Q8IWY9 1227 aa11.29□□□□□ -0.6
LCN1-201ENST00000263598 FAM43AQ8N2R8 423 aa11.29□□□□□ -0.6
LCN1-201ENST00000263598 TEKT1Q969V4 418 aa11.29□□□□□ -0.6
LCN1-201ENST00000263598 PUS3Q9BZE2 481 aaKnown RBP11.29□□□□□ -0.6
LCN1-201ENST00000263598 MRS2Q9HD23 443 aa11.29□□□□□ -0.6
LCN1-201ENST00000263598 ZCCHC17Q9NP64 241 aaKnown RBP11.29□□□□□ -0.6
LCN1-201ENST00000263598 PTCH2Q9Y6C5 1203 aa11.29□□□□□ -0.6
LCN1-201ENST00000263598 RBBP6Q7Z6E9 1792 aaKnown RBP11.28□□□□□ -0.6
LCN1-201ENST00000263598 SPDYE5A6NIY4 337 aa11.28□□□□□ -0.6
LCN1-201ENST00000263598 TLR2O60603 784 aa11.28□□□□□ -0.6
LCN1-201ENST00000263598 GNRH1P01148 92 aa11.28□□□□□ -0.6
LCN1-201ENST00000263598 CAP1Q01518 475 aa11.28□□□□□ -0.6
LCN1-201ENST00000263598 CHAF1AQ13111 956 aaPredicted RBP11.28□□□□□ -0.6
LCN1-201ENST00000263598 SNAPC2Q13487 334 aa11.28□□□□□ -0.6
LCN1-201ENST00000263598 METTL24Q5JXM2 366 aa11.28□□□□□ -0.6
LCN1-201ENST00000263598 FBXO33Q7Z6M2 555 aa11.28□□□□□ -0.6
LCN1-201ENST00000263598 ERO1BQ86YB8 467 aa11.28□□□□□ -0.6
LCN1-201ENST00000263598 SUCLG2Q96I99 432 aa11.28□□□□□ -0.6
LCN1-201ENST00000263598 WRNIP1Q96S55 665 aa11.28□□□□□ -0.6
LCN1-201ENST00000263598 IQSEC3Q9UPP2 1182 aaPredicted RBP11.28□□□□□ -0.6
LCN1-201ENST00000263598 RIPOR2Q9Y4F9 1068 aa11.28□□□□□ -0.6
LCN1-201ENST00000263598 MAST3O60307 1309 aa11.28□□□□□ -0.6
LCN1-201ENST00000263598 OTOFQ9HC10 1997 aa11.27□□□□□ -0.61
LCN1-201ENST00000263598 LACTBP83111 547 aaPredicted RBP11.27□□□□□ -0.61
LCN1-201ENST00000263598 DCAF15Q66K64 600 aa11.27□□□□□ -0.61
LCN1-201ENST00000263598 FAM83AQ86UY5 434 aa11.27□□□□□ -0.61
LCN1-201ENST00000263598 ZDHHC15Q96MV8 337 aa11.27□□□□□ -0.61
LCN1-201ENST00000263598 MRIQ9BWK5 157 aa11.27□□□□□ -0.61
LCN1-201ENST00000263598 SUGT1Q9Y2Z0 365 aa11.27□□□□□ -0.61
LCN1-201ENST00000263598 SNCAIPQ9Y6H5 919 aa11.27□□□□□ -0.61
LCN1-201ENST00000263598 ARAP2Q8WZ64 1704 aa11.26□□□□□ -0.61
LCN1-201ENST00000263598 PDE8BO95263 885 aa11.26□□□□□ -0.61
LCN1-201ENST00000263598 NBPF7P0C2Y1 421 aaPredicted RBP11.26□□□□□ -0.61
LCN1-201ENST00000263598 CACNB3P54284 484 aa11.26□□□□□ -0.61
LCN1-201ENST00000263598 PRMT2P55345 433 aa11.26□□□□□ -0.61
LCN1-201ENST00000263598 GRIK5Q16478 980 aa11.26□□□□□ -0.61
LCN1-201ENST00000263598 FKBP1CQ5VVH2 108 aa11.26□□□□□ -0.61
LCN1-201ENST00000263598 KAZALD1Q96I82 304 aa11.26□□□□□ -0.61
LCN1-201ENST00000263598 BICC1Q9H694 974 aaKnown RBP11.26□□□□□ -0.61
LCN1-201ENST00000263598 UTYO14607 1347 aa11.26□□□□□ -0.61
LCN1-201ENST00000263598 BTBD19C9JJ37 291 aa11.25□□□□□ -0.61
LCN1-201ENST00000263598 IRF6O14896 467 aa11.25□□□□□ -0.61
LCN1-201ENST00000263598 MYCP01106 439 aaPredicted RBP11.25□□□□□ -0.61
LCN1-201ENST00000263598 IFIT1P09914 478 aaKnown RBP11.25□□□□□ -0.61
LCN1-201ENST00000263598 FXR1P51114 621 aaKnown RBP eCLIP11.25□□□□□ -0.61
LCN1-201ENST00000263598 PPIL2Q13356 520 aa11.25□□□□□ -0.61
LCN1-201ENST00000263598 RABL6Q3YEC7 729 aaPredicted RBP11.25□□□□□ -0.61
LCN1-201ENST00000263598 LRRC24Q50LG9 513 aa11.25□□□□□ -0.61
LCN1-201ENST00000263598 SH3TC2Q8TF17 1288 aa11.25□□□□□ -0.61
LCN1-201ENST00000263598 ZKSCAN4Q969J2 545 aaPredicted RBP11.25□□□□□ -0.61
LCN1-201ENST00000263598 ZNF341Q9BYN7 854 aa11.25□□□□□ -0.61
LCN1-201ENST00000263598 SPINK5Q9NQ38 1064 aaPredicted RBP11.25□□□□□ -0.61
LCN1-201ENST00000263598 ANP32CO43423 234 aa11.24□□□□□ -0.61
LCN1-201ENST00000263598 HOXD10P28358 340 aa11.24□□□□□ -0.61
LCN1-201ENST00000263598 BCAMP50895 628 aa11.24□□□□□ -0.61
LCN1-201ENST00000263598 PPATQ06203 517 aa11.24□□□□□ -0.61
LCN1-201ENST00000263598 PUM3Q15397 648 aaKnown RBP11.24□□□□□ -0.61
LCN1-201ENST00000263598 APOBEC3HQ6NTF7 200 aaKnown RBP11.24□□□□□ -0.61
LCN1-201ENST00000263598 HHIPL2Q6UWX4 724 aa11.24□□□□□ -0.61
LCN1-201ENST00000263598 VGLL2Q8N8G2 317 aa11.24□□□□□ -0.61
LCN1-201ENST00000263598 ARHGAP39Q9C0H5 1083 aa11.24□□□□□ -0.61
LCN1-201ENST00000263598 COLQQ9Y215 455 aaPredicted RBP11.24□□□□□ -0.61
LCN1-201ENST00000263598 KIF16BQ96L93 1317 aa11.24□□□□□ -0.61
LCN1-201ENST00000263598 RPAP1Q9BWH6 1393 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms