RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 KRT28Q7Z3Y7 464 aa19.65■□□□□ 0.74
NOTCH3-201ENST00000263388 SMARCC2Q8TAQ2 1214 aa19.65■□□□□ 0.74
NOTCH3-201ENST00000263388 MIPOL1Q8TD10 442 aa19.65■□□□□ 0.74
NOTCH3-201ENST00000263388 IFT74Q96LB3 600 aa19.65■□□□□ 0.74
NOTCH3-201ENST00000263388 BAG1Q99933 345 aaPredicted RBP19.65■□□□□ 0.74
NOTCH3-201ENST00000263388 ARHGEF12Q9NZN5 1544 aa19.65■□□□□ 0.74
NOTCH3-201ENST00000263388 PLXNC1O60486 1568 aa19.65■□□□□ 0.74
NOTCH3-201ENST00000263388 PLCB3Q01970 1234 aa19.65■□□□□ 0.74
NOTCH3-201ENST00000263388 CREB3L3Q68CJ9 461 aa19.65■□□□□ 0.74
NOTCH3-201ENST00000263388 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.64■□□□□ 0.74
NOTCH3-201ENST00000263388 IFT81Q8WYA0 676 aa19.64■□□□□ 0.74
NOTCH3-201ENST00000263388 ACEP12821 1306 aa19.64■□□□□ 0.74
NOTCH3-201ENST00000263388 SOS1Q07889 1333 aaPredicted RBP19.64■□□□□ 0.74
NOTCH3-201ENST00000263388 MCM7P33993 719 aa19.64■□□□□ 0.74
NOTCH3-201ENST00000263388 RGS22Q8NE09 1264 aa19.64■□□□□ 0.74
NOTCH3-201ENST00000263388 DHX32Q7L7V1 743 aaKnown RBP19.64■□□□□ 0.73
NOTCH3-201ENST00000263388 HDAC9Q9UKV0 1011 aa19.64■□□□□ 0.73
NOTCH3-201ENST00000263388 OGFRQ9NZT2 677 aa19.64■□□□□ 0.73
NOTCH3-201ENST00000263388 ADAMTS2O95450 1211 aa19.64■□□□□ 0.73
NOTCH3-201ENST00000263388 KIFAP3Q92845 792 aa19.64■□□□□ 0.73
NOTCH3-201ENST00000263388 NDC80O14777 642 aa19.64■□□□□ 0.73
NOTCH3-201ENST00000263388 LACTBP83111 547 aaPredicted RBP19.63■□□□□ 0.73
NOTCH3-201ENST00000263388 ATP11AP98196 1134 aa19.63■□□□□ 0.73
NOTCH3-201ENST00000263388 IDI1Q13907 227 aa19.63■□□□□ 0.73
NOTCH3-201ENST00000263388 CFAP157Q5JU67 520 aa19.63■□□□□ 0.73
NOTCH3-201ENST00000263388 DNMT1P26358 1616 aaKnown RBP19.63■□□□□ 0.73
NOTCH3-201ENST00000263388 AK2P54819 239 aa19.63■□□□□ 0.73
NOTCH3-201ENST00000263388 SNX16P57768 344 aa19.63■□□□□ 0.73
NOTCH3-201ENST00000263388 CALCOCO2Q13137 446 aa19.63■□□□□ 0.73
NOTCH3-201ENST00000263388 PRAG1Q86YV5 1406 aa19.63■□□□□ 0.73
NOTCH3-201ENST00000263388 SEL1L2Q5TEA6 688 aa19.63■□□□□ 0.73
NOTCH3-201ENST00000263388 RPUSD2Q8IZ73 545 aaKnown RBP19.63■□□□□ 0.73
NOTCH3-201ENST00000263388 NGLY1Q96IV0 654 aa19.63■□□□□ 0.73
NOTCH3-201ENST00000263388 UTP11Q9Y3A2 253 aaKnown RBP19.63■□□□□ 0.73
NOTCH3-201ENST00000263388 URB2Q14146 1524 aaKnown RBP19.63■□□□□ 0.73
NOTCH3-201ENST00000263388 NMIQ13287 307 aaPredicted RBP19.63■□□□□ 0.73
NOTCH3-201ENST00000263388 CCDC65Q8IXS2 484 aa19.63■□□□□ 0.73
NOTCH3-201ENST00000263388 VWA3BQ502W6 1294 aa19.62■□□□□ 0.73
NOTCH3-201ENST00000263388 XAGE3Q8WTP9 111 aa19.62■□□□□ 0.73
NOTCH3-201ENST00000263388 UBLCP1Q8WVY7 318 aaPredicted RBP19.62■□□□□ 0.73
NOTCH3-201ENST00000263388 STMN2Q93045 179 aa19.62■□□□□ 0.73
NOTCH3-201ENST00000263388 MRPL50Q8N5N7 158 aaKnown RBP19.62■□□□□ 0.73
NOTCH3-201ENST00000263388 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.62■□□□□ 0.73
NOTCH3-201ENST00000263388 CCDC25Q86WR0 208 aa19.62■□□□□ 0.73
NOTCH3-201ENST00000263388 RAD50Q92878 1312 aa19.62■□□□□ 0.73
NOTCH3-201ENST00000263388 GBP6Q6ZN66 633 aa19.62■□□□□ 0.73
NOTCH3-201ENST00000263388 ZMYND15Q9H091 742 aa19.62■□□□□ 0.73
NOTCH3-201ENST00000263388 PARD3Q8TEW0 1356 aa19.62■□□□□ 0.73
NOTCH3-201ENST00000263388 MAST1Q9Y2H9 1570 aa19.61■□□□□ 0.73
NOTCH3-201ENST00000263388 MAGEB6Q8N7X4 407 aa19.61■□□□□ 0.73
NOTCH3-201ENST00000263388 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.61■□□□□ 0.73
NOTCH3-201ENST00000263388 MAPKBP1O60336 1514 aa19.61■□□□□ 0.73
NOTCH3-201ENST00000263388 CADPS2Q86UW7 1296 aa19.61■□□□□ 0.73
NOTCH3-201ENST00000263388 UBE2Q2Q8WVN8 375 aa19.61■□□□□ 0.73
NOTCH3-201ENST00000263388 NLRP3Q96P20 1036 aa19.61■□□□□ 0.73
NOTCH3-201ENST00000263388 RHOXF2BP0C7M4 288 aa19.61■□□□□ 0.73
NOTCH3-201ENST00000263388 EPB41P11171 864 aaKnown RBP19.61■□□□□ 0.73
NOTCH3-201ENST00000263388 CCDC122Q5T0U0 273 aa19.61■□□□□ 0.73
NOTCH3-201ENST00000263388 RHOXF2Q9BQY4 288 aa19.61■□□□□ 0.73
NOTCH3-201ENST00000263388 PPP2R3AQ06190 1150 aa19.61■□□□□ 0.73
NOTCH3-201ENST00000263388 MYL5Q02045 173 aa19.6■□□□□ 0.73
NOTCH3-201ENST00000263388 C8orf34Q49A92 452 aa19.6■□□□□ 0.73
NOTCH3-201ENST00000263388 LLPHQ9BRT6 129 aaKnown RBP19.6■□□□□ 0.73
NOTCH3-201ENST00000263388 TCHPQ9BT92 498 aa19.6■□□□□ 0.73
NOTCH3-201ENST00000263388 NKIRAS1Q9NYS0 192 aa19.6■□□□□ 0.73
NOTCH3-201ENST00000263388 ERCC6LQ2NKX8 1250 aa19.6■□□□□ 0.73
NOTCH3-201ENST00000263388 CNNM4Q6P4Q7 775 aa19.6■□□□□ 0.73
NOTCH3-201ENST00000263388 AKAP4Q5JQC9 854 aa19.6■□□□□ 0.73
NOTCH3-201ENST00000263388 TCEANC2Q96MN5 208 aa19.6■□□□□ 0.73
NOTCH3-201ENST00000263388 KCNK9Q9NPC2 374 aa19.6■□□□□ 0.73
NOTCH3-201ENST00000263388 ACTN4O43707 911 aaKnown RBP19.6■□□□□ 0.73
NOTCH3-201ENST00000263388 VCX3BQ9H321 246 aa19.6■□□□□ 0.73
NOTCH3-201ENST00000263388 POLR3AO14802 1390 aaPredicted RBP19.6■□□□□ 0.73
NOTCH3-201ENST00000263388 MSH6P52701 1360 aa19.6■□□□□ 0.73
NOTCH3-201ENST00000263388 CIB2O75838 187 aa19.59■□□□□ 0.73
NOTCH3-201ENST00000263388 SEC62Q99442 399 aaKnown RBP19.59■□□□□ 0.73
NOTCH3-201ENST00000263388 DCTPP1Q9H773 170 aa19.59■□□□□ 0.73
NOTCH3-201ENST00000263388 COPS6Q7L5N1 327 aa19.59■□□□□ 0.73
NOTCH3-201ENST00000263388 CEP120Q8N960 986 aa19.59■□□□□ 0.73
NOTCH3-201ENST00000263388 A0A1B0GUA9 196 aa19.59■□□□□ 0.73
NOTCH3-201ENST00000263388 RNF113AO15541 343 aaKnown RBP19.59■□□□□ 0.73
NOTCH3-201ENST00000263388 CLUL1Q15846 466 aa19.59■□□□□ 0.73
NOTCH3-201ENST00000263388 KARSQ15046 597 aaKnown RBP19.59■□□□□ 0.73
NOTCH3-201ENST00000263388 ZNF622Q969S3 477 aaKnown RBP eCLIP19.59■□□□□ 0.73
NOTCH3-201ENST00000263388 PIK3C2GO75747 1445 aa19.59■□□□□ 0.73
NOTCH3-201ENST00000263388 CYP26C1Q6V0L0 522 aa19.59■□□□□ 0.73
NOTCH3-201ENST00000263388 INTS8Q75QN2 995 aaKnown RBP19.59■□□□□ 0.73
NOTCH3-201ENST00000263388 PPP1R9BQ96SB3 815 aa19.59■□□□□ 0.73
NOTCH3-201ENST00000263388 IMPACTQ9P2X3 320 aa19.59■□□□□ 0.73
NOTCH3-201ENST00000263388 USH1CQ9Y6N9 552 aa19.59■□□□□ 0.73
NOTCH3-201ENST00000263388 MAP3K5Q99683 1374 aa19.59■□□□□ 0.73
NOTCH3-201ENST00000263388 INF2Q27J81 1249 aa19.59■□□□□ 0.73
NOTCH3-201ENST00000263388 NAP1L4Q99733 375 aaKnown RBP19.59■□□□□ 0.73
NOTCH3-201ENST00000263388 TSPOAP1O95153 1857 aa19.58■□□□□ 0.73
NOTCH3-201ENST00000263388 GPATCH8Q9UKJ3 1502 aaKnown RBP19.58■□□□□ 0.73
NOTCH3-201ENST00000263388 PTPDC1A2A3K4 754 aa19.58■□□□□ 0.73
NOTCH3-201ENST00000263388 SARNPP82979 210 aaKnown RBP19.58■□□□□ 0.73
NOTCH3-201ENST00000263388 UBL4BQ8N7F7 174 aa19.58■□□□□ 0.73
NOTCH3-201ENST00000263388 ZCRB1Q8TBF4 217 aaKnown RBP19.58■□□□□ 0.73
NOTCH3-201ENST00000263388 SYT10Q6XYQ8 523 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms