RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 CBX8Q9HC52 389 aa9.57□□□□□ -0.88
LDB3-201ENST00000263066 AKAP12Q02952 1782 aa9.57□□□□□ -0.88
LDB3-201ENST00000263066 C6orf229H3BNL8 230 aa9.57□□□□□ -0.88
LDB3-201ENST00000263066 AP1G2O75843 785 aa9.57□□□□□ -0.88
LDB3-201ENST00000263066 RHOXF2BP0C7M4 288 aa9.57□□□□□ -0.88
LDB3-201ENST00000263066 FOSBP53539 338 aa9.57□□□□□ -0.88
LDB3-201ENST00000263066 NUCB1Q02818 461 aa9.57□□□□□ -0.88
LDB3-201ENST00000263066 DNM1Q05193 864 aaKnown RBP9.57□□□□□ -0.88
LDB3-201ENST00000263066 HDXQ7Z353 690 aa9.57□□□□□ -0.88
LDB3-201ENST00000263066 JMYQ8N9B5 988 aa9.57□□□□□ -0.88
LDB3-201ENST00000263066 PIGBQ92521 554 aa9.57□□□□□ -0.88
LDB3-201ENST00000263066 RHOXF2Q9BQY4 288 aa9.57□□□□□ -0.88
LDB3-201ENST00000263066 SLC52A2Q9HAB3 445 aa9.57□□□□□ -0.88
LDB3-201ENST00000263066 DACT1Q9NYF0 836 aa9.57□□□□□ -0.88
LDB3-201ENST00000263066 TFIP11Q9UBB9 837 aaKnown RBP9.57□□□□□ -0.88
LDB3-201ENST00000263066 MAP3K5Q99683 1374 aa9.57□□□□□ -0.88
LDB3-201ENST00000263066 GNAI2P04899 355 aa9.57□□□□□ -0.88
LDB3-201ENST00000263066 CORO7P57737 925 aa9.57□□□□□ -0.88
LDB3-201ENST00000263066 WASHC4Q2M389 1173 aa9.57□□□□□ -0.88
LDB3-201ENST00000263066 FAM196AQ6ZSG2 479 aa9.57□□□□□ -0.88
LDB3-201ENST00000263066 GCC1Q96CN9 775 aa9.57□□□□□ -0.88
LDB3-201ENST00000263066 ZBTB10Q96DT7 871 aa9.57□□□□□ -0.88
LDB3-201ENST00000263066 ANKIB1Q9P2G1 1089 aa9.57□□□□□ -0.88
LDB3-201ENST00000263066 PIK3R4Q99570 1358 aa9.57□□□□□ -0.88
LDB3-201ENST00000263066 POLD1P28340 1107 aa9.56□□□□□ -0.88
LDB3-201ENST00000263066 CLEC17AQ6ZS10 378 aa9.56□□□□□ -0.88
LDB3-201ENST00000263066 AFAP1L1Q8TED9 768 aa9.56□□□□□ -0.88
LDB3-201ENST00000263066 ZBTB1Q9Y2K1 713 aa9.56□□□□□ -0.88
LDB3-201ENST00000263066 FAM135BQ49AJ0 1406 aa9.56□□□□□ -0.88
LDB3-201ENST00000263066 VAMP4O75379 141 aa9.56□□□□□ -0.88
LDB3-201ENST00000263066 ZBTB7AO95365 584 aa9.56□□□□□ -0.88
LDB3-201ENST00000263066 CCDC73Q6ZRK6 1079 aa9.56□□□□□ -0.88
LDB3-201ENST00000263066 IQCA1Q86XH1 822 aa9.56□□□□□ -0.88
LDB3-201ENST00000263066 SPDL1Q96EA4 605 aa9.56□□□□□ -0.88
LDB3-201ENST00000263066 CCDC114Q96M63 670 aa9.56□□□□□ -0.88
LDB3-201ENST00000263066 GOLGA6L7A0A1B0GV03 622 aa9.56□□□□□ -0.88
LDB3-201ENST00000263066 LRRC8AQ8IWT6 810 aa9.56□□□□□ -0.88
LDB3-201ENST00000263066 CEP112Q8N8E3 955 aa9.56□□□□□ -0.88
LDB3-201ENST00000263066 CCDC12Q8WUD4 166 aaPredicted RBP9.56□□□□□ -0.88
LDB3-201ENST00000263066 GOLGA1Q92805 767 aa9.56□□□□□ -0.88
LDB3-201ENST00000263066 THOC1Q96FV9 657 aaKnown RBP9.56□□□□□ -0.88
LDB3-201ENST00000263066 SPATA32Q96LK8 384 aa9.56□□□□□ -0.88
LDB3-201ENST00000263066 STRCP1A6NGW2 1772 aa9.56□□□□□ -0.88
LDB3-201ENST00000263066 H3BQV1 296 aa9.56□□□□□ -0.88
LDB3-201ENST00000263066 GSDMDP57764 484 aa9.56□□□□□ -0.88
LDB3-201ENST00000263066 IFFO2Q5TF58 517 aa9.56□□□□□ -0.88
LDB3-201ENST00000263066 PTF1AQ7RTS3 328 aa9.56□□□□□ -0.88
LDB3-201ENST00000263066 SETDB2Q96T68 719 aa9.56□□□□□ -0.88
LDB3-201ENST00000263066 ORC3Q9UBD5 711 aaPredicted RBP9.56□□□□□ -0.88
LDB3-201ENST00000263066 SRP68Q9UHB9 627 aaKnown RBP9.56□□□□□ -0.88
LDB3-201ENST00000263066 POLR3AO14802 1390 aaPredicted RBP9.55□□□□□ -0.88
LDB3-201ENST00000263066 PTPRCP08575 1304 aa9.55□□□□□ -0.88
LDB3-201ENST00000263066 LOC102724428A0A0B4J2F2 783 aa9.55□□□□□ -0.88
LDB3-201ENST00000263066 STX6O43752 255 aa9.55□□□□□ -0.88
LDB3-201ENST00000263066 ZEB2O60315 1214 aa9.55□□□□□ -0.88
LDB3-201ENST00000263066 SIK1P57059 783 aa9.55□□□□□ -0.88
LDB3-201ENST00000263066 HDAC1Q13547 482 aaPredicted RBP9.55□□□□□ -0.88
LDB3-201ENST00000263066 ZNF772Q68DY9 489 aaPredicted RBP9.55□□□□□ -0.88
LDB3-201ENST00000263066 FAM204AQ9H8W3 233 aa9.55□□□□□ -0.88
LDB3-201ENST00000263066 KIF9Q9HAQ2 790 aa9.55□□□□□ -0.88
LDB3-201ENST00000263066 F8W031 263 aaPredicted RBP9.55□□□□□ -0.88
LDB3-201ENST00000263066 BRD1O95696 1058 aa9.55□□□□□ -0.88
LDB3-201ENST00000263066 GNAI3P08754 354 aa9.55□□□□□ -0.88
LDB3-201ENST00000263066 DBN1Q16643 649 aa9.55□□□□□ -0.88
LDB3-201ENST00000263066 LONRF2Q1L5Z9 754 aa9.55□□□□□ -0.88
LDB3-201ENST00000263066 SUGP1Q8IWZ8 645 aaKnown RBP9.55□□□□□ -0.88
LDB3-201ENST00000263066 ZDHHC9Q9Y397 364 aa9.55□□□□□ -0.88
LDB3-201ENST00000263066 PLEKHG2Q9H7P9 1386 aa9.55□□□□□ -0.88
LDB3-201ENST00000263066 ELP1O95163 1332 aa9.55□□□□□ -0.88
LDB3-201ENST00000263066 MON2Q7Z3U7 1717 aa9.55□□□□□ -0.88
LDB3-201ENST00000263066 NDUFAB1O14561 156 aa9.55□□□□□ -0.88
LDB3-201ENST00000263066 KINO60870 393 aaKnown RBP9.55□□□□□ -0.88
LDB3-201ENST00000263066 SERPINC1P01008 464 aa9.55□□□□□ -0.88
LDB3-201ENST00000263066 SF3A1Q15459 793 aaKnown RBP9.55□□□□□ -0.88
LDB3-201ENST00000263066 KIF4BQ2VIQ3 1234 aa9.55□□□□□ -0.88
LDB3-201ENST00000263066 TRAPPC3LQ5T215 181 aa9.55□□□□□ -0.88
LDB3-201ENST00000263066 BCAS4Q8TDM0 211 aa9.55□□□□□ -0.88
LDB3-201ENST00000263066 MIEF2Q96C03 454 aa9.55□□□□□ -0.88
LDB3-201ENST00000263066 SAAL1Q96ER3 474 aa9.55□□□□□ -0.88
LDB3-201ENST00000263066 SAMM50Q9Y512 469 aa9.55□□□□□ -0.88
LDB3-201ENST00000263066 GOLGA6L10A6NI86 522 aa9.54□□□□□ -0.88
LDB3-201ENST00000263066 PPFIA4O75335 1185 aa9.54□□□□□ -0.88
LDB3-201ENST00000263066 METTL24Q5JXM2 366 aa9.54□□□□□ -0.88
LDB3-201ENST00000263066 LMBR1LQ6UX01 489 aa9.54□□□□□ -0.88
LDB3-201ENST00000263066 CEP57L1Q8IYX8 460 aa9.54□□□□□ -0.88
LDB3-201ENST00000263066 CLASRPQ8N2M8 674 aaKnown RBP9.54□□□□□ -0.88
LDB3-201ENST00000263066 NPC1L1Q9UHC9 1359 aa9.54□□□□□ -0.88
LDB3-201ENST00000263066 MED14O60244 1454 aa9.54□□□□□ -0.88
LDB3-201ENST00000263066 ZSCAN22P10073 491 aaPredicted RBP9.54□□□□□ -0.88
LDB3-201ENST00000263066 BAG6P46379 1132 aa9.54□□□□□ -0.88
LDB3-201ENST00000263066 MICALCLQ6ZW33 695 aa9.54□□□□□ -0.88
LDB3-201ENST00000263066 ZNF594Q96JF6 807 aaPredicted RBP9.54□□□□□ -0.88
LDB3-201ENST00000263066 ETAA1Q9NY74 926 aa9.54□□□□□ -0.88
LDB3-201ENST00000263066 INSRP06213 1382 aa9.54□□□□□ -0.88
LDB3-201ENST00000263066 RIMBP2O15034 1052 aa9.54□□□□□ -0.88
LDB3-201ENST00000263066 CHUKO15111 745 aa9.54□□□□□ -0.88
LDB3-201ENST00000263066 RWDD2BP57060 319 aa9.54□□□□□ -0.88
LDB3-201ENST00000263066 PPARDQ03181 441 aa9.54□□□□□ -0.88
LDB3-201ENST00000263066 SCRN1Q12765 414 aa9.54□□□□□ -0.88
LDB3-201ENST00000263066 LARP1BQ659C4 914 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms