RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 RASA3Q14644 834 aa16.69■□□□□ 0.26
SGCA-201ENST00000262018 TWISTNBQ3B726 338 aaPredicted RBP16.69■□□□□ 0.26
SGCA-201ENST00000262018 CFAP100Q494V2 611 aa16.69■□□□□ 0.26
SGCA-201ENST00000262018 UBE2Q1Q7Z7E8 422 aa16.69■□□□□ 0.26
SGCA-201ENST00000262018 C8orf58Q8NAV2 365 aa16.69■□□□□ 0.26
SGCA-201ENST00000262018 CWC25Q9NXE8 425 aaPredicted RBP16.69■□□□□ 0.26
SGCA-201ENST00000262018 LEMD3Q9Y2U8 911 aa16.69■□□□□ 0.26
SGCA-201ENST00000262018 ZSWIM8A7E2V4 1837 aa16.68■□□□□ 0.26
SGCA-201ENST00000262018 MS4A1P11836 297 aa16.68■□□□□ 0.26
SGCA-201ENST00000262018 CTSWP56202 376 aa16.68■□□□□ 0.26
SGCA-201ENST00000262018 ZKSCAN2Q63HK3 967 aa16.68■□□□□ 0.26
SGCA-201ENST00000262018 CERS5Q8N5B7 392 aa16.68■□□□□ 0.26
SGCA-201ENST00000262018 PRMT6Q96LA8 375 aaPredicted RBP16.68■□□□□ 0.26
SGCA-201ENST00000262018 KIF16BQ96L93 1317 aa16.68■□□□□ 0.26
SGCA-201ENST00000262018 SPDYE2BA6NHP3 402 aa16.67■□□□□ 0.26
SGCA-201ENST00000262018 ELL2O00472 640 aaPredicted RBP16.67■□□□□ 0.26
SGCA-201ENST00000262018 TLR2O60603 784 aa16.67■□□□□ 0.26
SGCA-201ENST00000262018 GNRH1P01148 92 aa16.67■□□□□ 0.26
SGCA-201ENST00000262018 SPDYE6P0CI01 402 aa16.67■□□□□ 0.26
SGCA-201ENST00000262018 GJA8P48165 433 aa16.67■□□□□ 0.26
SGCA-201ENST00000262018 GREM2Q9H772 168 aa16.67■□□□□ 0.26
SGCA-201ENST00000262018 STAP2Q9UGK3 403 aa16.67■□□□□ 0.26
SGCA-201ENST00000262018 AOX1Q06278 1338 aa16.67■□□□□ 0.26
SGCA-201ENST00000262018 GJB1P08034 283 aa16.66■□□□□ 0.26
SGCA-201ENST00000262018 CCL5P13501 91 aa16.66■□□□□ 0.26
SGCA-201ENST00000262018 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.66■□□□□ 0.26
SGCA-201ENST00000262018 MRPL50Q8N5N7 158 aaKnown RBP16.66■□□□□ 0.26
SGCA-201ENST00000262018 PANK1Q8TE04 598 aa16.66■□□□□ 0.26
SGCA-201ENST00000262018 PHAXQ9H814 394 aaKnown RBP16.66■□□□□ 0.26
SGCA-201ENST00000262018 SPEF2Q9C093 1822 aa16.65■□□□□ 0.26
SGCA-201ENST00000262018 FARP2O94887 1054 aaPredicted RBP16.65■□□□□ 0.26
SGCA-201ENST00000262018 GRK4P32298 578 aa16.65■□□□□ 0.26
SGCA-201ENST00000262018 RBM5P52756 815 aaKnown RBP eCLIP16.65■□□□□ 0.26
SGCA-201ENST00000262018 DEFB123Q8N688 67 aa16.65■□□□□ 0.26
SGCA-201ENST00000262018 TTLL11Q8NHH1 800 aa16.65■□□□□ 0.26
SGCA-201ENST00000262018 COL25A1Q9BXS0 654 aaPredicted RBP16.65■□□□□ 0.26
SGCA-201ENST00000262018 RNF208Q9H0X6 261 aa16.65■□□□□ 0.26
SGCA-201ENST00000262018 CD209Q9NNX6 404 aa16.65■□□□□ 0.26
SGCA-201ENST00000262018 BIN2Q9UBW5 565 aaPredicted RBP16.65■□□□□ 0.26
SGCA-201ENST00000262018 OTOFQ9HC10 1997 aa16.65■□□□□ 0.26
SGCA-201ENST00000262018 IPO8O15397 1037 aaKnown RBP16.64■□□□□ 0.25
SGCA-201ENST00000262018 EVI5O60447 810 aa16.64■□□□□ 0.25
SGCA-201ENST00000262018 KCNJ4P48050 445 aa16.64■□□□□ 0.25
SGCA-201ENST00000262018 AAMPQ13685 434 aa16.64■□□□□ 0.25
SGCA-201ENST00000262018 VGLL4Q14135 290 aa16.64■□□□□ 0.25
SGCA-201ENST00000262018 ATF7IPQ6VMQ6 1270 aa16.64■□□□□ 0.25
SGCA-201ENST00000262018 RAET1EQ8TD07 263 aa16.64■□□□□ 0.25
SGCA-201ENST00000262018 SRRDQ9UH36 339 aa16.64■□□□□ 0.25
SGCA-201ENST00000262018 NOB1Q9ULX3 412 aaKnown RBP16.64■□□□□ 0.25
SGCA-201ENST00000262018 TNNQ9UQP3 1299 aa16.64■□□□□ 0.25
SGCA-201ENST00000262018 ECM29Q5VYK3 1845 aa16.63■□□□□ 0.25
SGCA-201ENST00000262018 RLBP1P12271 317 aa16.63■□□□□ 0.25
SGCA-201ENST00000262018 IGHMBP2P38935 993 aaKnown RBP16.63■□□□□ 0.25
SGCA-201ENST00000262018 MAP3K9P80192 1104 aa16.63■□□□□ 0.25
SGCA-201ENST00000262018 CCDC30Q5VVM6 783 aa16.63■□□□□ 0.25
SGCA-201ENST00000262018 DZIP1LQ8IYY4 767 aaKnown RBP16.63■□□□□ 0.25
SGCA-201ENST00000262018 ANKRD2Q9GZV1 360 aa16.63■□□□□ 0.25
SGCA-201ENST00000262018 RIPOR2Q9Y4F9 1068 aa16.63■□□□□ 0.25
SGCA-201ENST00000262018 CSADQ9Y600 493 aa16.63■□□□□ 0.25
SGCA-201ENST00000262018 BTBD19C9JJ37 291 aa16.62■□□□□ 0.25
SGCA-201ENST00000262018 CETPP11597 493 aa16.62■□□□□ 0.25
SGCA-201ENST00000262018 TRIM27P14373 513 aa16.62■□□□□ 0.25
SGCA-201ENST00000262018 HOXD10P28358 340 aa16.62■□□□□ 0.25
SGCA-201ENST00000262018 PSMC4P43686 418 aa16.62■□□□□ 0.25
SGCA-201ENST00000262018 TNFAIP1Q13829 316 aa16.62■□□□□ 0.25
SGCA-201ENST00000262018 Q7L0L9 218 aa16.62■□□□□ 0.25
SGCA-201ENST00000262018 ARHGAP45Q92619 1136 aa16.62■□□□□ 0.25
SGCA-201ENST00000262018 TRIM47Q96LD4 638 aa16.62■□□□□ 0.25
SGCA-201ENST00000262018 STXBP5LQ9Y2K9 1186 aa16.62■□□□□ 0.25
SGCA-201ENST00000262018 COG6Q9Y2V7 657 aa16.62■□□□□ 0.25
SGCA-201ENST00000262018 FMNL1O95466 1100 aaPredicted RBP16.62■□□□□ 0.25
SGCA-201ENST00000262018 OSBPP22059 807 aa16.62■□□□□ 0.25
SGCA-201ENST00000262018 CTGFP29279 349 aa16.62■□□□□ 0.25
SGCA-201ENST00000262018 UBXN2AP68543 259 aa16.62■□□□□ 0.25
SGCA-201ENST00000262018 CDAN1Q8IWY9 1227 aa16.62■□□□□ 0.25
SGCA-201ENST00000262018 U2AF1L4Q8WU68 220 aaKnown RBP16.62■□□□□ 0.25
SGCA-201ENST00000262018 METTL22Q9BUU2 404 aaPredicted RBP16.62■□□□□ 0.25
SGCA-201ENST00000262018 MVPQ14764 893 aaKnown RBP16.61■□□□□ 0.25
SGCA-201ENST00000262018 STK31Q9BXU1 1019 aa16.61■□□□□ 0.25
SGCA-201ENST00000262018 ZCCHC17Q9NP64 241 aaKnown RBP16.61■□□□□ 0.25
SGCA-201ENST00000262018 ZNF70Q9UC06 446 aaPredicted RBP16.61■□□□□ 0.25
SGCA-201ENST00000262018 CPA4Q9UI42 421 aa16.61■□□□□ 0.25
SGCA-201ENST00000262018 JAG2Q9Y219 1238 aa16.61■□□□□ 0.25
SGCA-201ENST00000262018 MYPNQ86TC9 1320 aa16.6■□□□□ 0.25
SGCA-201ENST00000262018 SPDYE5A6NIY4 337 aa16.6■□□□□ 0.25
SGCA-201ENST00000262018 GPR153Q6NV75 609 aa16.6■□□□□ 0.25
SGCA-201ENST00000262018 C17orf99Q6UX52 265 aa16.6■□□□□ 0.25
SGCA-201ENST00000262018 FTSJ3Q8IY81 847 aaKnown RBP16.6■□□□□ 0.25
SGCA-201ENST00000262018 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.6■□□□□ 0.25
SGCA-201ENST00000262018 CLUAP1Q96AJ1 413 aa16.6■□□□□ 0.25
SGCA-201ENST00000262018 TEPSINQ96N21 525 aa16.6■□□□□ 0.25
SGCA-201ENST00000262018 SPDYE2Q495Y8 402 aa16.59■□□□□ 0.25
SGCA-201ENST00000262018 HELBQ8NG08 1087 aaPredicted RBP16.59■□□□□ 0.25
SGCA-201ENST00000262018 MPHOSPH8Q99549 860 aa16.59■□□□□ 0.25
SGCA-201ENST00000262018 UNC93B1Q9H1C4 597 aa16.59■□□□□ 0.25
SGCA-201ENST00000262018 TDRD3Q9H7E2 651 aaKnown RBP16.59■□□□□ 0.25
SGCA-201ENST00000262018 CACNA1FO60840 1977 aa16.58■□□□□ 0.25
SGCA-201ENST00000262018 TCP10L2B9ZVM9 353 aa16.58■□□□□ 0.24
SGCA-201ENST00000262018 SNAP23O00161 211 aa16.58■□□□□ 0.24
SGCA-201ENST00000262018 SGPL1O95470 568 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms