RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 HINFPQ9BQA5 517 aa15.08■□□□□ 0
SNX1-201ENST00000261889 RNF216Q9NWF9 866 aaPredicted RBP15.08■□□□□ 0
SNX1-201ENST00000261889 SNAP23O00161 211 aa15.08■□□□□ 0
SNX1-201ENST00000261889 ZNF202O95125 648 aa15.08■□□□□ 0
SNX1-201ENST00000261889 CASP1P29466 404 aa15.08■□□□□ 0
SNX1-201ENST00000261889 MAST3O60307 1309 aa15.08■□□□□ 0
SNX1-201ENST00000261889 CARMIL3Q8ND23 1372 aa15.07■□□□□ 0
SNX1-201ENST00000261889 PFKFB2O60825 505 aa15.07■□□□□ 0
SNX1-201ENST00000261889 MRFAP1L1Q96HT8 127 aa15.07■□□□□ 0
SNX1-201ENST00000261889 U3KPZ7 1027 aaPredicted RBP15.07■□□□□ 0
SNX1-201ENST00000261889 A1BGP04217 495 aa15.07■□□□□ 0
SNX1-201ENST00000261889 IFIT1P09914 478 aaKnown RBP15.07■□□□□ 0
SNX1-201ENST00000261889 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.07■□□□□ 0
SNX1-201ENST00000261889 KIAA1468Q9P260 1216 aa15.07■□□□□ 0
SNX1-201ENST00000261889 ANKRD65E5RJM6 399 aa15.07■□□□□ 0
SNX1-201ENST00000261889 PFKFB1P16118 471 aa15.07■□□□□ 0
SNX1-201ENST00000261889 ATP5JP18859 108 aa15.07■□□□□ 0
SNX1-201ENST00000261889 GTF2E1P29083 439 aaPredicted RBP15.07■□□□□ 0
SNX1-201ENST00000261889 HMG20BQ9P0W2 317 aa15.07■□□□□ 0
SNX1-201ENST00000261889 MORC2Q9Y6X9 1032 aaPredicted RBP15.07■□□□□ 0
SNX1-201ENST00000261889 THSD7AQ9UPZ6 1657 aa15.07■□□□□ 0
SNX1-201ENST00000261889 hCG_1642624A0A1W2PR95 340 aa15.06■□□□□ 0
SNX1-201ENST00000261889 SPTLC2O15270 562 aa15.06■□□□□ 0
SNX1-201ENST00000261889 CDC27P30260 824 aa15.06■□□□□ 0
SNX1-201ENST00000261889 FANCCQ00597 558 aa15.06■□□□□ 0
SNX1-201ENST00000261889 MTF1Q14872 753 aa15.06■□□□□ 0
SNX1-201ENST00000261889 WWC2Q6AWC2 1192 aa15.06■□□□□ 0
SNX1-201ENST00000261889 MNS1Q8NEH6 495 aa15.06■□□□□ 0
SNX1-201ENST00000261889 NOL10Q9BSC4 688 aaKnown RBP15.06■□□□□ 0
SNX1-201ENST00000261889 ZSCAN16Q9H4T2 348 aaPredicted RBP15.06■□□□□ 0
SNX1-201ENST00000261889 DISP2A7MBM2 1401 aa15.06■□□□□ 0
SNX1-201ENST00000261889 EPB41L2O43491 1005 aaKnown RBP15.06■□□□□ 0
SNX1-201ENST00000261889 GRIN1Q05586 938 aa15.06■□□□□ 0
SNX1-201ENST00000261889 LONRF3Q496Y0 759 aa15.06■□□□□ 0
SNX1-201ENST00000261889 SYNE3Q6ZMZ3 975 aa15.06■□□□□ 0
SNX1-201ENST00000261889 GPIHBP1Q8IV16 184 aa15.06■□□□□ 0
SNX1-201ENST00000261889 ZKSCAN3Q9BRR0 538 aa15.06■□□□□ 0
SNX1-201ENST00000261889 FANCLQ9NW38 375 aa15.06■□□□□ 0
SNX1-201ENST00000261889 SPATA31A6Q5VVP1 1343 aa15.06■□□□□ 0
SNX1-201ENST00000261889 SCN11AQ9UI33 1791 aa15.06■□□□□ 0
SNX1-201ENST00000261889 RFX5P48382 616 aaPredicted RBP15.05■□□□□ 0
SNX1-201ENST00000261889 KRT32Q14532 448 aa15.05■□□□□ 0
SNX1-201ENST00000261889 WDR24Q96S15 920 aa15.05■□□□□ 0
SNX1-201ENST00000261889 TOMM22Q9NS69 142 aa15.05■□□□□ 0
SNX1-201ENST00000261889 PRC1O43663 620 aa15.05■□□□□ -0
SNX1-201ENST00000261889 KLHL10Q6JEL2 608 aa15.05■□□□□ -0
SNX1-201ENST00000261889 CERS3Q8IU89 383 aa15.05■□□□□ -0
SNX1-201ENST00000261889 KBTBD3Q8NAB2 608 aa15.05■□□□□ -0
SNX1-201ENST00000261889 LINC00301Q8NCQ3 95 aa15.05■□□□□ -0
SNX1-201ENST00000261889 SMARCC2Q8TAQ2 1214 aa15.05■□□□□ -0
SNX1-201ENST00000261889 ERO1AQ96HE7 468 aa15.05■□□□□ -0
SNX1-201ENST00000261889 PUS7LQ9H0K6 701 aaKnown RBP15.05■□□□□ -0
SNX1-201ENST00000261889 CDK11BP21127 795 aaKnown RBP15.05■□□□□ -0
SNX1-201ENST00000261889 UBASH3AP57075 661 aa15.05■□□□□ -0
SNX1-201ENST00000261889 IRX5P78411 483 aaPredicted RBP15.05■□□□□ -0
SNX1-201ENST00000261889 TTC5Q8N0Z6 440 aa15.05■□□□□ -0
SNX1-201ENST00000261889 ZNF396Q96N95 335 aaPredicted RBP15.05■□□□□ -0
SNX1-201ENST00000261889 A0A1B0GUL7 405 aa15.04■□□□□ -0
SNX1-201ENST00000261889 PDE4BQ07343 736 aa15.04■□□□□ -0
SNX1-201ENST00000261889 UBXN4Q92575 508 aa15.04■□□□□ -0
SNX1-201ENST00000261889 METTL22Q9BUU2 404 aaPredicted RBP15.04■□□□□ -0
SNX1-201ENST00000261889 A0A0G2JS52 829 aa15.04■□□□□ -0
SNX1-201ENST00000261889 STX17P56962 302 aa15.04■□□□□ -0
SNX1-201ENST00000261889 STAMQ92783 540 aa15.04■□□□□ -0
SNX1-201ENST00000261889 LZTFL1Q9NQ48 299 aa15.04■□□□□ -0
SNX1-201ENST00000261889 TMEM51Q9NW97 253 aa15.04■□□□□ -0
SNX1-201ENST00000261889 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.04■□□□□ -05e-7■■□□□ 13.4
SNX1-201ENST00000261889 PNMA6AP0CW24 399 aaPredicted RBP15.04■□□□□ -0
SNX1-201ENST00000261889 RRP12Q5JTH9 1297 aaKnown RBP15.04■□□□□ -0
SNX1-201ENST00000261889 USPL1Q5W0Q7 1092 aa15.04■□□□□ -0
SNX1-201ENST00000261889 RAPGEF4Q8WZA2 1011 aa15.04■□□□□ -0
SNX1-201ENST00000261889 HAUS7Q99871 368 aa15.04■□□□□ -0
SNX1-201ENST00000261889 SUGCTQ9HAC7 445 aa15.04■□□□□ -0
SNX1-201ENST00000261889 PUF60Q9UHX1 559 aaKnown RBP15.04■□□□□ -0
SNX1-201ENST00000261889 FHOD1Q9Y613 1164 aa15.04■□□□□ -0
SNX1-201ENST00000261889 BCL9LQ86UU0 1499 aa15.03■□□□□ -0
SNX1-201ENST00000261889 HNRNPH2P55795 449 aaKnown RBP15.03■□□□□ -0
SNX1-201ENST00000261889 GNG11P61952 73 aa15.03■□□□□ -0
SNX1-201ENST00000261889 PALLDQ8WX93 1383 aa15.03■□□□□ -0
SNX1-201ENST00000261889 PHACTR2O75167 634 aa15.03■□□□□ -0
SNX1-201ENST00000261889 SASH3O75995 380 aa15.03■□□□□ -0
SNX1-201ENST00000261889 FGAP02671 866 aa15.03■□□□□ -0
SNX1-201ENST00000261889 PLA2G4AP47712 749 aa15.03■□□□□ -0
SNX1-201ENST00000261889 MYSM1Q5VVJ2 828 aa15.03■□□□□ -0
SNX1-201ENST00000261889 TOGARAM2Q6ZUX3 1019 aa15.03■□□□□ -0
SNX1-201ENST00000261889 HELBQ8NG08 1087 aaPredicted RBP15.03■□□□□ -0
SNX1-201ENST00000261889 KAT6BQ8WYB5 2073 aa15.03■□□□□ -0
SNX1-201ENST00000261889 PXDNLA1KZ92 1463 aa15.02■□□□□ -0
SNX1-201ENST00000261889 NCAPHQ15003 741 aa15.02■□□□□ -0
SNX1-201ENST00000261889 NAT10Q9H0A0 1025 aaKnown RBP15.02■□□□□ -0
SNX1-201ENST00000261889 PLEKHA4Q9H4M7 779 aa15.02■□□□□ -0
SNX1-201ENST00000261889 PAPPAQ13219 1627 aa15.02■□□□□ -0
SNX1-201ENST00000261889 HSPA1LP34931 641 aa15.02■□□□□ -0
SNX1-201ENST00000261889 PIP4K2BP78356 416 aa15.02■□□□□ -0
SNX1-201ENST00000261889 SARM1Q6SZW1 724 aa15.02■□□□□ -0
SNX1-201ENST00000261889 KCNJ14Q9UNX9 436 aa15.02■□□□□ -0
SNX1-201ENST00000261889 ZAP70P43403 619 aa15.02□□□□□ -0.01
SNX1-201ENST00000261889 EVCP57679 992 aa15.02□□□□□ -0.01
SNX1-201ENST00000261889 SMYD4Q8IYR2 804 aaPredicted RBP15.02□□□□□ -0.01
SNX1-201ENST00000261889 TOGARAM1Q9Y4F4 1720 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms