RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 B4GALNT3Q6L9W6 998 aa14.24□□□□□ -0.13
PFDN1-201ENST00000261813 CENPQQ7L2Z9 268 aaPredicted RBP14.24□□□□□ -0.13
PFDN1-201ENST00000261813 ERC1Q8IUD2 1116 aa14.24□□□□□ -0.13
PFDN1-201ENST00000261813 RHPN1Q8TCX5 695 aa14.24□□□□□ -0.13
PFDN1-201ENST00000261813 GPR108Q9NPR9 543 aa14.24□□□□□ -0.13
PFDN1-201ENST00000261813 AKAP2Q9Y2D5 859 aa14.24□□□□□ -0.13
PFDN1-201ENST00000261813 FPGT-TNNI3KV9GXZ4 949 aa14.24□□□□□ -0.13
PFDN1-201ENST00000261813 POTECB2RU33 542 aa14.23□□□□□ -0.13
PFDN1-201ENST00000261813 APBB1O00213 710 aa14.23□□□□□ -0.13
PFDN1-201ENST00000261813 VIL1P09327 827 aaKnown RBP14.23□□□□□ -0.13
PFDN1-201ENST00000261813 TNIP1Q15025 636 aa14.23□□□□□ -0.13
PFDN1-201ENST00000261813 CAVIN4Q5BKX8 364 aa14.23□□□□□ -0.13
PFDN1-201ENST00000261813 TDRD7Q8NHU6 1098 aaKnown RBP14.23□□□□□ -0.13
PFDN1-201ENST00000261813 XAGE2Q96GT9 111 aa14.23□□□□□ -0.13
PFDN1-201ENST00000261813 DCTPP1Q9H773 170 aa14.23□□□□□ -0.13
PFDN1-201ENST00000261813 PSME4Q14997 1843 aa14.23□□□□□ -0.13
PFDN1-201ENST00000261813 USP17L3A6NCW0 530 aa14.22□□□□□ -0.13
PFDN1-201ENST00000261813 USP17L4A6NCW7 530 aa14.22□□□□□ -0.13
PFDN1-201ENST00000261813 RAB11FIP3O75154 756 aa14.22□□□□□ -0.13
PFDN1-201ENST00000261813 VEGFAP15692 232 aaPredicted RBP14.22□□□□□ -0.13
PFDN1-201ENST00000261813 SCNN1DP51172 638 aa14.22□□□□□ -0.13
PFDN1-201ENST00000261813 DACT2Q5SW24 774 aa14.22□□□□□ -0.13
PFDN1-201ENST00000261813 COL13A1Q5TAT6 717 aaPredicted RBP14.22□□□□□ -0.13
PFDN1-201ENST00000261813 USP17L1Q7RTZ2 530 aa14.22□□□□□ -0.13
PFDN1-201ENST00000261813 VPS37DQ86XT2 251 aa14.22□□□□□ -0.13
PFDN1-201ENST00000261813 EAF2Q96CJ1 260 aaPredicted RBP14.22□□□□□ -0.13
PFDN1-201ENST00000261813 KIF1BPQ96EK5 621 aa14.22□□□□□ -0.13
PFDN1-201ENST00000261813 NEUROD6Q96NK8 337 aa14.22□□□□□ -0.13
PFDN1-201ENST00000261813 IL1RAPL2Q9NP60 686 aa14.22□□□□□ -0.13
PFDN1-201ENST00000261813 IQSEC3Q9UPP2 1182 aaPredicted RBP14.22□□□□□ -0.13
PFDN1-201ENST00000261813 PHKA1P46020 1223 aa14.22□□□□□ -0.13
PFDN1-201ENST00000261813 GMPSP49915 693 aaPredicted RBP14.22□□□□□ -0.13
PFDN1-201ENST00000261813 GTF2IP78347 998 aa14.22□□□□□ -0.13
PFDN1-201ENST00000261813 STRIP1Q5VSL9 837 aa14.22□□□□□ -0.13
PFDN1-201ENST00000261813 CCDC102BQ68D86 513 aa14.22□□□□□ -0.13
PFDN1-201ENST00000261813 RSBN1LQ6PCB5 846 aaPredicted RBP14.22□□□□□ -0.13
PFDN1-201ENST00000261813 TNS4Q8IZW8 715 aa14.22□□□□□ -0.13
PFDN1-201ENST00000261813 FBXW7Q969H0 707 aa14.22□□□□□ -0.13
PFDN1-201ENST00000261813 MXD3Q9BW11 206 aa14.22□□□□□ -0.13
PFDN1-201ENST00000261813 TLR7Q9NYK1 1049 aaKnown RBP14.22□□□□□ -0.13
PFDN1-201ENST00000261813 JAG2Q9Y219 1238 aa14.22□□□□□ -0.13
PFDN1-201ENST00000261813 COL1A1P02452 1464 aaPredicted RBP14.21□□□□□ -0.13
PFDN1-201ENST00000261813 TTLL5Q6EMB2 1281 aa14.21□□□□□ -0.14
PFDN1-201ENST00000261813 GCC1Q96CN9 775 aa14.21□□□□□ -0.14
PFDN1-201ENST00000261813 DBNDD2Q9BQY9 259 aa14.21□□□□□ -0.14
PFDN1-201ENST00000261813 CCDC8Q9H0W5 538 aaPredicted RBP14.21□□□□□ -0.14
PFDN1-201ENST00000261813 SHTN1A0MZ66 631 aa14.2□□□□□ -0.14
PFDN1-201ENST00000261813 SMARCA5O60264 1052 aaPredicted RBP14.2□□□□□ -0.14
PFDN1-201ENST00000261813 GMLQ99445 158 aa14.2□□□□□ -0.14
PFDN1-201ENST00000261813 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.2□□□□□ -0.14
PFDN1-201ENST00000261813 DBNLQ9UJU6 430 aaKnown RBP14.2□□□□□ -0.14
PFDN1-201ENST00000261813 FAM205AQ6ZU69 1335 aa14.2□□□□□ -0.14
PFDN1-201ENST00000261813 C2orf72A6NCS6 295 aa14.19□□□□□ -0.14
PFDN1-201ENST00000261813 IGHDP01880 384 aa14.19□□□□□ -0.14
PFDN1-201ENST00000261813 HOXB3P14651 431 aaPredicted RBP14.19□□□□□ -0.14
PFDN1-201ENST00000261813 RPS12P25398 132 aaKnown RBP14.19□□□□□ -0.14
PFDN1-201ENST00000261813 EPS15P42566 896 aa14.19□□□□□ -0.14
PFDN1-201ENST00000261813 CHAF1AQ13111 956 aaPredicted RBP14.19□□□□□ -0.14
PFDN1-201ENST00000261813 AACSQ86V21 672 aa14.19□□□□□ -0.14
PFDN1-201ENST00000261813 CLASRPQ8N2M8 674 aaKnown RBP14.19□□□□□ -0.14
PFDN1-201ENST00000261813 CERS5Q8N5B7 392 aa14.19□□□□□ -0.14
PFDN1-201ENST00000261813 AGBL3Q8NEM8 1001 aa14.19□□□□□ -0.14
PFDN1-201ENST00000261813 DPF2Q92785 391 aa14.19□□□□□ -0.14
PFDN1-201ENST00000261813 LRRCC1Q9C099 1032 aa14.19□□□□□ -0.14
PFDN1-201ENST00000261813 GPRC5DQ9NZD1 345 aa14.19□□□□□ -0.14
PFDN1-201ENST00000261813 SCN4AP35499 1836 aa14.18□□□□□ -0.14
PFDN1-201ENST00000261813 IQCA1LA6NCM1 817 aa14.18□□□□□ -0.14
PFDN1-201ENST00000261813 FRAT2O75474 233 aaPredicted RBP14.18□□□□□ -0.14
PFDN1-201ENST00000261813 GORABQ5T7V8 394 aa14.18□□□□□ -0.14
PFDN1-201ENST00000261813 FAM163AQ96GL9 167 aaPredicted RBP14.18□□□□□ -0.14
PFDN1-201ENST00000261813 TAF1DQ9H5J8 278 aaPredicted RBP14.18□□□□□ -0.14
PFDN1-201ENST00000261813 GNL3LQ9NVN8 582 aaKnown RBP14.18□□□□□ -0.14
PFDN1-201ENST00000261813 CNOT7Q9UIV1 285 aaKnown RBP14.18□□□□□ -0.14
PFDN1-201ENST00000261813 HACL1Q9UJ83 578 aa14.18□□□□□ -0.14
PFDN1-201ENST00000261813 MYO3BQ8WXR4 1341 aa14.17□□□□□ -0.14
PFDN1-201ENST00000261813 ARID4AP29374 1257 aaPredicted RBP14.17□□□□□ -0.14
PFDN1-201ENST00000261813 LMOD1P29536 600 aaPredicted RBP14.17□□□□□ -0.14
PFDN1-201ENST00000261813 FKBP1AP62942 108 aaKnown RBP14.17□□□□□ -0.14
PFDN1-201ENST00000261813 RASGRF1Q13972 1273 aa14.17□□□□□ -0.14
PFDN1-201ENST00000261813 SCARF1Q14162 830 aa14.17□□□□□ -0.14
PFDN1-201ENST00000261813 BCL11AQ9H165 835 aa14.17□□□□□ -0.14
PFDN1-201ENST00000261813 SEMA3EO15041 775 aa14.16□□□□□ -0.14
PFDN1-201ENST00000261813 EPHX2P34913 555 aa14.16□□□□□ -0.14
PFDN1-201ENST00000261813 GRIK5Q16478 980 aa14.16□□□□□ -0.14
PFDN1-201ENST00000261813 MFSD14BQ5SR56 506 aa14.16□□□□□ -0.14
PFDN1-201ENST00000261813 KIAA0825Q8IV33 1275 aa14.16□□□□□ -0.14
PFDN1-201ENST00000261813 DENND2AQ9ULE3 1009 aa14.16□□□□□ -0.14
PFDN1-201ENST00000261813 MYH13Q9UKX3 1938 aa14.15□□□□□ -0.14
PFDN1-201ENST00000261813 ST18O60284 1047 aa14.15□□□□□ -0.14
PFDN1-201ENST00000261813 EGFRP00533 1210 aa14.15□□□□□ -0.14
PFDN1-201ENST00000261813 IFIT2P09913 472 aaKnown RBP14.15□□□□□ -0.14
PFDN1-201ENST00000261813 UQCRFS1P1P0C7P4 283 aa14.15□□□□□ -0.14
PFDN1-201ENST00000261813 MCAMP43121 646 aa14.15□□□□□ -0.14
PFDN1-201ENST00000261813 ZNF280AP59817 542 aaPredicted RBP14.15□□□□□ -0.14
PFDN1-201ENST00000261813 CCDC158Q5M9N0 1113 aa14.15□□□□□ -0.14
PFDN1-201ENST00000261813 TTC39AQ5SRH9 613 aa14.15□□□□□ -0.14
PFDN1-201ENST00000261813 PI16Q6UXB8 463 aa14.15□□□□□ -0.14
PFDN1-201ENST00000261813 SMC5Q8IY18 1101 aa14.15□□□□□ -0.14
PFDN1-201ENST00000261813 SPRYD3Q8NCJ5 442 aa14.15□□□□□ -0.14
PFDN1-201ENST00000261813 TRPM4Q8TD43 1214 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms