RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 ZNF831Q5JPB2 1677 aa12.57□□□□□ -0.4
CHRNA1-201ENST00000261007 RIC1Q4ADV7 1423 aa12.56□□□□□ -0.4
CHRNA1-201ENST00000261007 CCDC69A6NI79 296 aa12.56□□□□□ -0.4
CHRNA1-201ENST00000261007 CYP21A2P08686 494 aa12.56□□□□□ -0.4
CHRNA1-201ENST00000261007 H2AFXP16104 143 aaPredicted RBP12.56□□□□□ -0.4
CHRNA1-201ENST00000261007 EIF5P55010 431 aaKnown RBP12.56□□□□□ -0.4
CHRNA1-201ENST00000261007 TOB2Q14106 344 aaPredicted RBP12.56□□□□□ -0.4
CHRNA1-201ENST00000261007 LLPHQ9BRT6 129 aaKnown RBP12.56□□□□□ -0.4
CHRNA1-201ENST00000261007 IMPACTQ9P2X3 320 aa12.56□□□□□ -0.4
CHRNA1-201ENST00000261007 MROH5Q6ZUA9 1318 aa12.56□□□□□ -0.4
CHRNA1-201ENST00000261007 USP27XA6NNY8 438 aa12.56□□□□□ -0.4
CHRNA1-201ENST00000261007 CDK11BP21127 795 aaKnown RBP12.56□□□□□ -0.4
CHRNA1-201ENST00000261007 GPTP24298 496 aa12.56□□□□□ -0.4
CHRNA1-201ENST00000261007 FAM173BQ6P4H8 233 aa12.56□□□□□ -0.4
CHRNA1-201ENST00000261007 DHX32Q7L7V1 743 aaKnown RBP12.56□□□□□ -0.4
CHRNA1-201ENST00000261007 CNNM1Q9NRU3 951 aa12.56□□□□□ -0.4
CHRNA1-201ENST00000261007 TFIP11Q9UBB9 837 aaKnown RBP12.56□□□□□ -0.4
CHRNA1-201ENST00000261007 MAST3O60307 1309 aa12.55□□□□□ -0.4
CHRNA1-201ENST00000261007 SLIT2O94813 1529 aa12.55□□□□□ -0.4
CHRNA1-201ENST00000261007 RGL2O15211 777 aa12.55□□□□□ -0.4
CHRNA1-201ENST00000261007 UQCRFS1P1P0C7P4 283 aa12.55□□□□□ -0.4
CHRNA1-201ENST00000261007 HSPD1P10809 573 aaKnown RBP12.55□□□□□ -0.4
CHRNA1-201ENST00000261007 CYP2C19P33261 490 aa12.55□□□□□ -0.4
CHRNA1-201ENST00000261007 RESTQ13127 1097 aa12.55□□□□□ -0.4
CHRNA1-201ENST00000261007 ELF2Q15723 593 aa12.55□□□□□ -0.4
CHRNA1-201ENST00000261007 CCDC129Q6ZRS4 1044 aa12.55□□□□□ -0.4
CHRNA1-201ENST00000261007 CNKSR2Q8WXI2 1034 aa12.55□□□□□ -0.4
CHRNA1-201ENST00000261007 APPBP2Q92624 585 aa12.55□□□□□ -0.4
CHRNA1-201ENST00000261007 NOL10Q9BSC4 688 aaKnown RBP12.55□□□□□ -0.4
CHRNA1-201ENST00000261007 OSBPL5Q9H0X9 879 aaPredicted RBP12.55□□□□□ -0.4
CHRNA1-201ENST00000261007 NDUFB9Q9Y6M9 179 aa12.55□□□□□ -0.4
CHRNA1-201ENST00000261007 PSDA5PKW4 1024 aaPredicted RBP12.54□□□□□ -0.4
CHRNA1-201ENST00000261007 TOM1O60784 492 aa12.54□□□□□ -0.4
CHRNA1-201ENST00000261007 FKBP4Q02790 459 aaKnown RBP eCLIP12.54□□□□□ -0.4
CHRNA1-201ENST00000261007 FBXL16Q8N461 479 aa12.54□□□□□ -0.4
CHRNA1-201ENST00000261007 GTF3C6Q969F1 213 aa12.54□□□□□ -0.4
CHRNA1-201ENST00000261007 SEC62Q99442 399 aaKnown RBP12.54□□□□□ -0.4
CHRNA1-201ENST00000261007 GREM2Q9H772 168 aa12.54□□□□□ -0.4
CHRNA1-201ENST00000261007 MYH7P12883 1935 aa12.54□□□□□ -0.4
CHRNA1-201ENST00000261007 RTL9Q8NET4 1388 aa12.54□□□□□ -0.4
CHRNA1-201ENST00000261007 LOC102724428A0A0B4J2F2 783 aa12.54□□□□□ -0.4
CHRNA1-201ENST00000261007 PDE8BO95263 885 aa12.54□□□□□ -0.4
CHRNA1-201ENST00000261007 ADAMTS2O95450 1211 aa12.54□□□□□ -0.4
CHRNA1-201ENST00000261007 SIK1P57059 783 aa12.54□□□□□ -0.4
CHRNA1-201ENST00000261007 ATL3Q6DD88 541 aa12.54□□□□□ -0.4
CHRNA1-201ENST00000261007 AGXT2Q9BYV1 514 aa12.54□□□□□ -0.4
CHRNA1-201ENST00000261007 ANO10Q9NW15 660 aa12.54□□□□□ -0.4
CHRNA1-201ENST00000261007 ZNF446Q9NWS9 450 aa12.54□□□□□ -0.4
CHRNA1-201ENST00000261007 ZNF652Q9Y2D9 606 aa12.54□□□□□ -0.4
CHRNA1-201ENST00000261007 CCDC9Q9Y3X0 531 aaKnown RBP12.54□□□□□ -0.4
CHRNA1-201ENST00000261007 ARAP2Q8WZ64 1704 aa12.54□□□□□ -0.4
CHRNA1-201ENST00000261007 KAT6BQ8WYB5 2073 aa12.53□□□□□ -0.4
CHRNA1-201ENST00000261007 BECN2A8MW95 431 aa12.53□□□□□ -0.4
CHRNA1-201ENST00000261007 ATP8B1O43520 1251 aa12.53□□□□□ -0.4
CHRNA1-201ENST00000261007 ATP6V1AP38606 617 aa12.53□□□□□ -0.4
CHRNA1-201ENST00000261007 CCDC93Q567U6 631 aa12.53□□□□□ -0.4
CHRNA1-201ENST00000261007 INTS5Q6P9B9 1019 aaKnown RBP12.53□□□□□ -0.4
CHRNA1-201ENST00000261007 Q6ZUG5 572 aa12.53□□□□□ -0.4
CHRNA1-201ENST00000261007 VGLL2Q8N8G2 317 aa12.53□□□□□ -0.4
CHRNA1-201ENST00000261007 UTP14AQ9BVJ6 771 aaKnown RBP12.53□□□□□ -0.4
CHRNA1-201ENST00000261007 LAMB2P55268 1798 aa12.53□□□□□ -0.4
CHRNA1-201ENST00000261007 ATRNO75882 1429 aa12.53□□□□□ -0.4
CHRNA1-201ENST00000261007 ADORA1P30542 326 aa12.52□□□□□ -0.4
CHRNA1-201ENST00000261007 CRKLP46109 303 aaKnown RBP12.52□□□□□ -0.4
CHRNA1-201ENST00000261007 SNW1Q13573 536 aaKnown RBP12.52□□□□□ -0.4
CHRNA1-201ENST00000261007 PUM3Q15397 648 aaKnown RBP12.52□□□□□ -0.4
CHRNA1-201ENST00000261007 IMMTQ16891 758 aaKnown RBP12.52□□□□□ -0.4
CHRNA1-201ENST00000261007 C11orf57Q6ZUT1 292 aaPredicted RBP12.52□□□□□ -0.4
CHRNA1-201ENST00000261007 DHX40Q8IX18 779 aaKnown RBP12.52□□□□□ -0.4
CHRNA1-201ENST00000261007 LPIN2Q92539 896 aa12.52□□□□□ -0.4
CHRNA1-201ENST00000261007 NAT10Q9H0A0 1025 aaKnown RBP12.52□□□□□ -0.4
CHRNA1-201ENST00000261007 RCOR1Q9UKL0 485 aa12.52□□□□□ -0.4
CHRNA1-201ENST00000261007 TBC1D2BQ9UPU7 963 aa12.52□□□□□ -0.4
CHRNA1-201ENST00000261007 ZBTB22O15209 634 aa12.52□□□□□ -0.41
CHRNA1-201ENST00000261007 PFKFB2O60825 505 aa12.52□□□□□ -0.41
CHRNA1-201ENST00000261007 ARID4AP29374 1257 aaPredicted RBP12.52□□□□□ -0.41
CHRNA1-201ENST00000261007 ARID5BQ14865 1188 aa12.52□□□□□ -0.41
CHRNA1-201ENST00000261007 WASHC4Q2M389 1173 aa12.52□□□□□ -0.41
CHRNA1-201ENST00000261007 FILIP1Q7Z7B0 1213 aa12.52□□□□□ -0.41
CHRNA1-201ENST00000261007 MARCH10Q8NA82 808 aaPredicted RBP12.52□□□□□ -0.41
CHRNA1-201ENST00000261007 CCDC150Q8NCX0 1101 aa12.52□□□□□ -0.41
CHRNA1-201ENST00000261007 IPO4Q8TEX9 1081 aaKnown RBP12.52□□□□□ -0.41
CHRNA1-201ENST00000261007 FHOD1Q9Y613 1164 aa12.52□□□□□ -0.41
CHRNA1-201ENST00000261007 UBN2Q6ZU65 1347 aa12.52□□□□□ -0.41
CHRNA1-201ENST00000261007 WDR19Q8NEZ3 1342 aa12.52□□□□□ -0.41
CHRNA1-201ENST00000261007 LAMA4Q16363 1823 aa12.52□□□□□ -0.41
CHRNA1-201ENST00000261007 CCP110O43303 1012 aa12.51□□□□□ -0.41
CHRNA1-201ENST00000261007 SLC5A1P13866 664 aa12.51□□□□□ -0.41
CHRNA1-201ENST00000261007 ZAP70P43403 619 aa12.51□□□□□ -0.41
CHRNA1-201ENST00000261007 EXOSC10Q01780 885 aaKnown RBP12.51□□□□□ -0.41
CHRNA1-201ENST00000261007 UBE3CQ15386 1083 aa12.51□□□□□ -0.41
CHRNA1-201ENST00000261007 CCDC152Q4G0S7 254 aa12.51□□□□□ -0.41
CHRNA1-201ENST00000261007 CEP57L1Q8IYX8 460 aa12.51□□□□□ -0.41
CHRNA1-201ENST00000261007 OSBP2Q969R2 916 aa12.51□□□□□ -0.41
CHRNA1-201ENST00000261007 ZNF274Q96GC6 653 aaPredicted RBP12.51□□□□□ -0.41
CHRNA1-201ENST00000261007 CCDC85AQ96PX6 553 aaPredicted RBP12.51□□□□□ -0.41
CHRNA1-201ENST00000261007 ARGLU1Q9NWB6 273 aaPredicted RBP12.51□□□□□ -0.41
CHRNA1-201ENST00000261007 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.51□□□□□ -0.41
CHRNA1-201ENST00000261007 TAF6LQ9Y6J9 622 aa12.51□□□□□ -0.41
CHRNA1-201ENST00000261007 V9GYY5 206 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms