RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 GMLQ99445 158 aa19.11■□□□□ 0.65
CCDC90B-201ENST00000260054 MYO3BQ8WXR4 1341 aa19.11■□□□□ 0.65
CCDC90B-201ENST00000260054 CHMLP26374 656 aa19.11■□□□□ 0.65
CCDC90B-201ENST00000260054 DZIP1Q86YF9 867 aaKnown RBP19.11■□□□□ 0.65
CCDC90B-201ENST00000260054 TTF2Q9UNY4 1162 aaKnown RBP19.11■□□□□ 0.65
CCDC90B-201ENST00000260054 GJA3Q9Y6H8 435 aa19.11■□□□□ 0.65
CCDC90B-201ENST00000260054 TCRBV5S4A2TA0A5A2 114 aa19.1■□□□□ 0.65
CCDC90B-201ENST00000260054 RNF113AO15541 343 aaKnown RBP19.1■□□□□ 0.65
CCDC90B-201ENST00000260054 CDC45O75419 566 aa19.1■□□□□ 0.65
CCDC90B-201ENST00000260054 DIXDC1Q155Q3 683 aa19.1■□□□□ 0.65
CCDC90B-201ENST00000260054 AGBL3Q8NEM8 1001 aa19.1■□□□□ 0.65
CCDC90B-201ENST00000260054 MYH7P12883 1935 aa19.1■□□□□ 0.65
CCDC90B-201ENST00000260054 ZNF532Q9HCE3 1301 aa19.1■□□□□ 0.65
CCDC90B-201ENST00000260054 IGSF3O75054 1194 aa19.09■□□□□ 0.65
CCDC90B-201ENST00000260054 ZFYP08048 801 aaPredicted RBP19.09■□□□□ 0.65
CCDC90B-201ENST00000260054 NAA16Q6N069 864 aaPredicted RBP19.09■□□□□ 0.65
CCDC90B-201ENST00000260054 ZSCAN25Q6NSZ9 544 aa19.09■□□□□ 0.65
CCDC90B-201ENST00000260054 ADGRA1Q86SQ6 560 aa19.09■□□□□ 0.65
CCDC90B-201ENST00000260054 TICAM2Q86XR7 235 aa19.09■□□□□ 0.65
CCDC90B-201ENST00000260054 FAM227BQ96M60 508 aa19.09■□□□□ 0.65
CCDC90B-201ENST00000260054 MAST2Q6P0Q8 1798 aa19.09■□□□□ 0.65
CCDC90B-201ENST00000260054 SCNN1DP51172 638 aa19.08■□□□□ 0.65
CCDC90B-201ENST00000260054 NMIQ13287 307 aaPredicted RBP19.08■□□□□ 0.65
CCDC90B-201ENST00000260054 UBE3CQ15386 1083 aa19.08■□□□□ 0.65
CCDC90B-201ENST00000260054 LRRFIP1Q32MZ4 808 aaKnown RBP19.08■□□□□ 0.65
CCDC90B-201ENST00000260054 GPC2Q8N158 579 aa19.08■□□□□ 0.65
CCDC90B-201ENST00000260054 DIAPH3Q9NSV4 1193 aa19.08■□□□□ 0.65
CCDC90B-201ENST00000260054 ZC3H4Q9UPT8 1303 aaKnown RBP19.08■□□□□ 0.65
CCDC90B-201ENST00000260054 A0A0D9SFI3 127 aa19.08■□□□□ 0.64
CCDC90B-201ENST00000260054 HIP1O00291 1037 aa19.08■□□□□ 0.64
CCDC90B-201ENST00000260054 DDNO94850 711 aaPredicted RBP19.08■□□□□ 0.64
CCDC90B-201ENST00000260054 CYP7A1P22680 504 aa19.08■□□□□ 0.64
CCDC90B-201ENST00000260054 RPS12P25398 132 aaKnown RBP19.08■□□□□ 0.64
CCDC90B-201ENST00000260054 GMPSP49915 693 aaPredicted RBP19.08■□□□□ 0.64
CCDC90B-201ENST00000260054 ZMYM1Q5SVZ6 1142 aa19.08■□□□□ 0.64
CCDC90B-201ENST00000260054 CWC27Q6UX04 472 aaKnown RBP19.08■□□□□ 0.64
CCDC90B-201ENST00000260054 MAST3O60307 1309 aa19.07■□□□□ 0.64
CCDC90B-201ENST00000260054 APPBP2Q92624 585 aa19.07■□□□□ 0.64
CCDC90B-201ENST00000260054 OSBP2Q969R2 916 aa19.07■□□□□ 0.64
CCDC90B-201ENST00000260054 SEC62Q99442 399 aaKnown RBP19.07■□□□□ 0.64
CCDC90B-201ENST00000260054 IL25Q9H293 177 aa19.07■□□□□ 0.64
CCDC90B-201ENST00000260054 USP17L8P0C7I0 530 aa19.06■□□□□ 0.64
CCDC90B-201ENST00000260054 DPF2Q92785 391 aa19.06■□□□□ 0.64
CCDC90B-201ENST00000260054 PUS7LQ9H0K6 701 aaKnown RBP19.06■□□□□ 0.64
CCDC90B-201ENST00000260054 SHTN1A0MZ66 631 aa19.05■□□□□ 0.64
CCDC90B-201ENST00000260054 GSTO1P78417 241 aa19.05■□□□□ 0.64
CCDC90B-201ENST00000260054 C8orf34Q49A92 452 aa19.05■□□□□ 0.64
CCDC90B-201ENST00000260054 TMED8Q6PL24 325 aaPredicted RBP19.05■□□□□ 0.64
CCDC90B-201ENST00000260054 FAM163AQ96GL9 167 aaPredicted RBP19.05■□□□□ 0.64
CCDC90B-201ENST00000260054 MROH7-TTC4A0A0A0MT08 1334 aa19.05■□□□□ 0.64
CCDC90B-201ENST00000260054 GAKO14976 1311 aa19.05■□□□□ 0.64
CCDC90B-201ENST00000260054 M0R2C6 588 aa19.05■□□□□ 0.64
CCDC90B-201ENST00000260054 CRKP46108 304 aa19.05■□□□□ 0.64
CCDC90B-201ENST00000260054 MIGA1Q8NAN2 632 aa19.05■□□□□ 0.64
CCDC90B-201ENST00000260054 TEKT1Q969V4 418 aa19.05■□□□□ 0.64
CCDC90B-201ENST00000260054 MRIQ9BWK5 157 aa19.05■□□□□ 0.64
CCDC90B-201ENST00000260054 DAGLAQ9Y4D2 1042 aa19.05■□□□□ 0.64
CCDC90B-201ENST00000260054 PCDHAC2Q9Y5I4 1007 aa19.05■□□□□ 0.64
CCDC90B-201ENST00000260054 ADAMTSL1Q8N6G6 1762 aa19.04■□□□□ 0.64
CCDC90B-201ENST00000260054 MYH2Q9UKX2 1941 aa19.04■□□□□ 0.64
CCDC90B-201ENST00000260054 LDHCP07864 332 aa19.04■□□□□ 0.64
CCDC90B-201ENST00000260054 HDLBPQ00341 1268 aaKnown RBP19.04■□□□□ 0.64
CCDC90B-201ENST00000260054 DPY19L2Q6NUT2 758 aa19.04■□□□□ 0.64
CCDC90B-201ENST00000260054 CASC1Q6TDU7 716 aa19.04■□□□□ 0.64
CCDC90B-201ENST00000260054 HHIPL2Q6UWX4 724 aa19.04■□□□□ 0.64
CCDC90B-201ENST00000260054 SLF2Q8IX21 1173 aa19.04■□□□□ 0.64
CCDC90B-201ENST00000260054 OGFOD1Q8N543 542 aa19.04■□□□□ 0.64
CCDC90B-201ENST00000260054 HELLSQ9NRZ9 838 aa19.04■□□□□ 0.64
CCDC90B-201ENST00000260054 SERPINA10Q9UK55 444 aa19.04■□□□□ 0.64
CCDC90B-201ENST00000260054 HDAC9Q9UKV0 1011 aa19.04■□□□□ 0.64
CCDC90B-201ENST00000260054 GLTPD2A6NH11 291 aa19.03■□□□□ 0.64
CCDC90B-201ENST00000260054 MCMDC2Q4G0Z9 681 aa19.03■□□□□ 0.64
CCDC90B-201ENST00000260054 ZNF589Q86UQ0 364 aaPredicted RBP19.03■□□□□ 0.64
CCDC90B-201ENST00000260054 MICALL2Q8IY33 904 aa19.03■□□□□ 0.64
CCDC90B-201ENST00000260054 ESYT1Q9BSJ8 1104 aa19.03■□□□□ 0.64
CCDC90B-201ENST00000260054 AATFQ9NY61 560 aaKnown RBP eCLIP19.03■□□□□ 0.64
CCDC90B-201ENST00000260054 CNOT7Q9UIV1 285 aaKnown RBP19.03■□□□□ 0.64
CCDC90B-201ENST00000260054 GPR75-ASB3A0A0A6YYF3 556 aa19.02■□□□□ 0.64
CCDC90B-201ENST00000260054 SGSM2O43147 1006 aa19.02■□□□□ 0.64
CCDC90B-201ENST00000260054 BTDP43251 543 aa19.02■□□□□ 0.64
CCDC90B-201ENST00000260054 ZNF280AP59817 542 aaPredicted RBP19.02■□□□□ 0.64
CCDC90B-201ENST00000260054 DYNLL1P63167 89 aaKnown RBP19.02■□□□□ 0.64
CCDC90B-201ENST00000260054 CCDC129Q6ZRS4 1044 aa19.02■□□□□ 0.64
CCDC90B-201ENST00000260054 ZDHHC15Q96MV8 337 aa19.02■□□□□ 0.64
CCDC90B-201ENST00000260054 RIOK1Q9BRS2 568 aaKnown RBP19.02■□□□□ 0.64
CCDC90B-201ENST00000260054 GPRC5DQ9NZD1 345 aa19.02■□□□□ 0.64
CCDC90B-201ENST00000260054 MBD4O95243 580 aa19.01■□□□□ 0.63
CCDC90B-201ENST00000260054 CFAP100Q494V2 611 aa19.01■□□□□ 0.63
CCDC90B-201ENST00000260054 RUFY2Q8WXA3 655 aa19.01■□□□□ 0.63
CCDC90B-201ENST00000260054 RAD50Q92878 1312 aa19.01■□□□□ 0.63
CCDC90B-201ENST00000260054 MAGEB6P1A0A0J9YX57 407 aa19.01■□□□□ 0.63
CCDC90B-201ENST00000260054 GPAA1O43292 621 aa19.01■□□□□ 0.63
CCDC90B-201ENST00000260054 RBM5P52756 815 aaKnown RBP eCLIP19.01■□□□□ 0.63
CCDC90B-201ENST00000260054 APOBEC3HQ6NTF7 200 aaKnown RBP19.01■□□□□ 0.63
CCDC90B-201ENST00000260054 LCORLQ8N3X6 602 aa19.01■□□□□ 0.63
CCDC90B-201ENST00000260054 AIDAQ96BJ3 306 aa19.01■□□□□ 0.63
CCDC90B-201ENST00000260054 L3MBTL3Q96JM7 780 aaPredicted RBP19.01■□□□□ 0.63
CCDC90B-201ENST00000260054 ARMT1Q9H993 441 aa19.01■□□□□ 0.63
CCDC90B-201ENST00000260054 MYOZ2Q9NPC6 264 aa19.01■□□□□ 0.63
CCDC90B-201ENST00000260054 EGFRP00533 1210 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms