RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 LAMA4Q16363 1823 aa21.31■■□□□ 1
CCDC115-201ENST00000259229 AOC3Q16853 763 aa21.3■■□□□ 1
CCDC115-201ENST00000259229 ERICH6Q7L0X2 663 aa21.3■■□□□ 1
CCDC115-201ENST00000259229 RASEFQ8IZ41 740 aa21.3■■□□□ 1
CCDC115-201ENST00000259229 ANAPC15P60006 121 aa21.29■■□□□ 1
CCDC115-201ENST00000259229 ZGPATQ8N5A5 531 aaKnown RBP21.29■■□□□ 1
CCDC115-201ENST00000259229 SUPT20HQ8NEM7 779 aa21.29■■□□□ 1
CCDC115-201ENST00000259229 DBNDD1Q9H9R9 158 aa21.29■■□□□ 1
CCDC115-201ENST00000259229 MYH2Q9UKX2 1941 aa21.29■■□□□ 1
CCDC115-201ENST00000259229 IGSF3O75054 1194 aa21.29■■□□□ 1
CCDC115-201ENST00000259229 CYP7A1P22680 504 aa21.29■■□□□ 1
CCDC115-201ENST00000259229 MCCP23508 829 aa21.29■■□□□ 1
CCDC115-201ENST00000259229 SOGA3Q5TF21 947 aa21.29■■□□□ 1
CCDC115-201ENST00000259229 STRBPQ96SI9 672 aaKnown RBP21.29■■□□□ 1
CCDC115-201ENST00000259229 SNX14Q9Y5W7 946 aa21.29■■□□□ 1
CCDC115-201ENST00000259229 ADAMTSL1Q8N6G6 1762 aa21.28■■□□□ 1
CCDC115-201ENST00000259229 ECE2O60344 883 aa21.28■■□□□ 1
CCDC115-201ENST00000259229 MBD4O95243 580 aa21.28■■□□□ 1
CCDC115-201ENST00000259229 GTF2IP78347 998 aa21.28■■□□□ 1
CCDC115-201ENST00000259229 NAA16Q6N069 864 aaPredicted RBP21.28■■□□□ 1
CCDC115-201ENST00000259229 PODNQ7Z5L7 613 aa21.28■■□□□ 1
CCDC115-201ENST00000259229 CERS5Q8N5B7 392 aa21.28■■□□□ 1
CCDC115-201ENST00000259229 RIOK1Q9BRS2 568 aaKnown RBP21.28■■□□□ 1
CCDC115-201ENST00000259229 TAF6LQ9Y6J9 622 aa21.28■■□□□ 1
CCDC115-201ENST00000259229 SLC27A2O14975 620 aa21.27■■□□□ 1
CCDC115-201ENST00000259229 MFSD14BQ5SR56 506 aa21.27■■□□□ 1
CCDC115-201ENST00000259229 CREB3L3Q68CJ9 461 aa21.27■■□□□ 1
CCDC115-201ENST00000259229 SPTY2D1Q68D10 685 aaPredicted RBP21.27■■□□□ 1
CCDC115-201ENST00000259229 LCORLQ8N3X6 602 aa21.27■■□□□ 1
CCDC115-201ENST00000259229 KCNQ5Q9NR82 932 aa21.27■■□□□ 1
CCDC115-201ENST00000259229 LDHBP07195 334 aaKnown RBP21.26■□□□□ 0.99
CCDC115-201ENST00000259229 TMED8Q6PL24 325 aaPredicted RBP21.26■□□□□ 0.99
CCDC115-201ENST00000259229 MIGA1Q8NAN2 632 aa21.26■□□□□ 0.99
CCDC115-201ENST00000259229 TBC1D22AQ8WUA7 517 aa21.26■□□□□ 0.99
CCDC115-201ENST00000259229 ARMT1Q9H993 441 aa21.26■□□□□ 0.99
CCDC115-201ENST00000259229 U3KPZ7 1027 aaPredicted RBP21.26■□□□□ 0.99
CCDC115-201ENST00000259229 CDK5RAP2Q96SN8 1893 aa21.26■□□□□ 0.99
CCDC115-201ENST00000259229 NFKBIEO00221 500 aa21.26■□□□□ 0.99
CCDC115-201ENST00000259229 PPIP5K2O43314 1243 aa21.26■□□□□ 0.99
CCDC115-201ENST00000259229 AIDAQ96BJ3 306 aa21.26■□□□□ 0.99
CCDC115-201ENST00000259229 ZNF277Q9NRM2 450 aaPredicted RBP21.26■□□□□ 0.99
CCDC115-201ENST00000259229 YDJCA8MPS7 323 aa21.25■□□□□ 0.99
CCDC115-201ENST00000259229 DZIP1Q86YF9 867 aaKnown RBP21.25■□□□□ 0.99
CCDC115-201ENST00000259229 FHDC1Q9C0D6 1143 aaPredicted RBP21.25■□□□□ 0.99
CCDC115-201ENST00000259229 BCS1LQ9Y276 419 aa21.25■□□□□ 0.99
CCDC115-201ENST00000259229 RPAP1Q9BWH6 1393 aaPredicted RBP21.24■□□□□ 0.99
CCDC115-201ENST00000259229 RABEP1Q15276 862 aa21.24■□□□□ 0.99
CCDC115-201ENST00000259229 TTLL5Q6EMB2 1281 aa21.24■□□□□ 0.99
CCDC115-201ENST00000259229 MXD3Q9BW11 206 aa21.24■□□□□ 0.99
CCDC115-201ENST00000259229 EPB41L4AQ9HCS5 686 aaPredicted RBP21.24■□□□□ 0.99
CCDC115-201ENST00000259229 CD2BP2O95400 341 aaKnown RBP21.23■□□□□ 0.99
CCDC115-201ENST00000259229 CYP21A2P08686 494 aa21.23■□□□□ 0.99
CCDC115-201ENST00000259229 DYNLL1P63167 89 aaKnown RBP21.23■□□□□ 0.99
CCDC115-201ENST00000259229 DIXDC1Q155Q3 683 aa21.23■□□□□ 0.99
CCDC115-201ENST00000259229 IPO9Q96P70 1041 aaKnown RBP21.23■□□□□ 0.99
CCDC115-201ENST00000259229 VPS33BQ9H267 617 aa21.23■□□□□ 0.99
CCDC115-201ENST00000259229 TIAM2Q8IVF5 1701 aa21.23■□□□□ 0.99
CCDC115-201ENST00000259229 MAGEB6P1A0A0J9YX57 407 aa21.22■□□□□ 0.99
CCDC115-201ENST00000259229 G3V3G9 751 aa21.22■□□□□ 0.99
CCDC115-201ENST00000259229 ADCK5Q3MIX3 580 aa21.22■□□□□ 0.99
CCDC115-201ENST00000259229 TSGA10IPQ3SY00 556 aa21.22■□□□□ 0.99
CCDC115-201ENST00000259229 DACT2Q5SW24 774 aa21.22■□□□□ 0.99
CCDC115-201ENST00000259229 DCAF8Q5TAQ9 597 aa21.22■□□□□ 0.99
CCDC115-201ENST00000259229 DDRGK1Q96HY6 314 aa21.22■□□□□ 0.99
CCDC115-201ENST00000259229 SUGT1Q9Y2Z0 365 aa21.22■□□□□ 0.99
CCDC115-201ENST00000259229 ZMYM6O95789 1325 aa21.22■□□□□ 0.99
CCDC115-201ENST00000259229 DDX60LQ5H9U9 1706 aaKnown RBP21.22■□□□□ 0.99
CCDC115-201ENST00000259229 FOCADQ5VW36 1801 aa21.22■□□□□ 0.99
CCDC115-201ENST00000259229 GSG1L2A8MUP6 293 aa21.22■□□□□ 0.99
CCDC115-201ENST00000259229 PRKAB2O43741 272 aa21.22■□□□□ 0.99
CCDC115-201ENST00000259229 FGAP02671 866 aa21.22■□□□□ 0.99
CCDC115-201ENST00000259229 COL9A3Q14050 684 aaPredicted RBP21.22■□□□□ 0.99
CCDC115-201ENST00000259229 STRIP1Q5VSL9 837 aa21.22■□□□□ 0.99
CCDC115-201ENST00000259229 MROH7-TTC4A0A0A0MT08 1334 aa21.22■□□□□ 0.99
CCDC115-201ENST00000259229 LTBP3Q9NS15 1303 aa21.22■□□□□ 0.99
CCDC115-201ENST00000259229 LAMB1P07942 1786 aa21.21■□□□□ 0.99
CCDC115-201ENST00000259229 GAKO14976 1311 aa21.21■□□□□ 0.99
CCDC115-201ENST00000259229 IARSP41252 1262 aaKnown RBP21.21■□□□□ 0.99
CCDC115-201ENST00000259229 FKBP1AP62942 108 aaKnown RBP21.21■□□□□ 0.99
CCDC115-201ENST00000259229 TAOK3Q9H2K8 898 aa21.21■□□□□ 0.99
CCDC115-201ENST00000259229 BAZ2AQ9UIF9 1905 aaKnown RBP21.21■□□□□ 0.99
CCDC115-201ENST00000259229 ALX1Q15699 326 aa21.2■□□□□ 0.98
CCDC115-201ENST00000259229 FBXW7Q969H0 707 aa21.2■□□□□ 0.98
CCDC115-201ENST00000259229 SNX21Q969T3 373 aa21.2■□□□□ 0.98
CCDC115-201ENST00000259229 TBC1D2Q9BYX2 928 aa21.2■□□□□ 0.98
CCDC115-201ENST00000259229 AATFQ9NY61 560 aaKnown RBP eCLIP21.2■□□□□ 0.98
CCDC115-201ENST00000259229 PATL2C9JE40 543 aaKnown RBP21.19■□□□□ 0.98
CCDC115-201ENST00000259229 GNAT2P19087 354 aa21.19■□□□□ 0.98
CCDC115-201ENST00000259229 PRELPP51888 382 aa21.19■□□□□ 0.98
CCDC115-201ENST00000259229 GSTO1P78417 241 aa21.19■□□□□ 0.98
CCDC115-201ENST00000259229 RNF20Q5VTR2 975 aa21.19■□□□□ 0.98
CCDC115-201ENST00000259229 STOX1Q6ZVD7 989 aa21.19■□□□□ 0.98
CCDC115-201ENST00000259229 LARGE2Q8N3Y3 721 aa21.19■□□□□ 0.98
CCDC115-201ENST00000259229 FAM163AQ96GL9 167 aaPredicted RBP21.19■□□□□ 0.98
CCDC115-201ENST00000259229 SLC4A4Q9Y6R1 1079 aa21.19■□□□□ 0.98
CCDC115-201ENST00000259229 NAV1Q8NEY1 1877 aa21.19■□□□□ 0.98
CCDC115-201ENST00000259229 USP17L3A6NCW0 530 aa21.18■□□□□ 0.98
CCDC115-201ENST00000259229 USP17L4A6NCW7 530 aa21.18■□□□□ 0.98
CCDC115-201ENST00000259229 USP17L1Q7RTZ2 530 aa21.18■□□□□ 0.98
CCDC115-201ENST00000259229 IFNL3Q8IZI9 196 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms