RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 USP17L1Q7RTZ2 530 aa21.01■□□□□ 0.95
SRSF1-201ENST00000258962 PALD1Q9ULE6 856 aa21.01■□□□□ 0.95
SRSF1-201ENST00000258962 CLEC11AQ9Y240 323 aa21.01■□□□□ 0.95
SRSF1-201ENST00000258962 ZBTB12Q9Y330 459 aaPredicted RBP21.01■□□□□ 0.95
SRSF1-201ENST00000258962 DOCK2Q92608 1830 aa21■□□□□ 0.95
SRSF1-201ENST00000258962 H7C1D1 291 aa21■□□□□ 0.95
SRSF1-201ENST00000258962 MCAMP43121 646 aa21■□□□□ 0.95
SRSF1-201ENST00000258962 PI16Q6UXB8 463 aa21■□□□□ 0.95
SRSF1-201ENST00000258962 DPF2Q92785 391 aa21■□□□□ 0.95
SRSF1-201ENST00000258962 FBXW7Q969H0 707 aa21■□□□□ 0.95
SRSF1-201ENST00000258962 SNX21Q969T3 373 aa21■□□□□ 0.95
SRSF1-201ENST00000258962 CNOT7Q9UIV1 285 aaKnown RBP21■□□□□ 0.95
SRSF1-201ENST00000258962 HSPA4P34932 840 aa20.99■□□□□ 0.95
SRSF1-201ENST00000258962 ZAP70P43403 619 aa20.99■□□□□ 0.95
SRSF1-201ENST00000258962 PTH1RQ03431 593 aa20.99■□□□□ 0.95
SRSF1-201ENST00000258962 TICAM2Q86XR7 235 aa20.99■□□□□ 0.95
SRSF1-201ENST00000258962 IL17RAQ96F46 866 aa20.99■□□□□ 0.95
SRSF1-201ENST00000258962 CD209Q9NNX6 404 aa20.99■□□□□ 0.95
SRSF1-201ENST00000258962 MCCP23508 829 aa20.99■□□□□ 0.95
SRSF1-201ENST00000258962 RABEP1Q15276 862 aa20.99■□□□□ 0.95
SRSF1-201ENST00000258962 KIAA1211Q6ZU35 1233 aa20.99■□□□□ 0.95
SRSF1-201ENST00000258962 ZNF589Q86UQ0 364 aaPredicted RBP20.99■□□□□ 0.95
SRSF1-201ENST00000258962 LDHDQ86WU2 507 aa20.99■□□□□ 0.95
SRSF1-201ENST00000258962 ADARB2Q9NS39 739 aaKnown RBP20.99■□□□□ 0.95
SRSF1-201ENST00000258962 CCDC171Q6TFL3 1326 aa20.98■□□□□ 0.95
SRSF1-201ENST00000258962 CD2BP2O95400 341 aaKnown RBP20.98■□□□□ 0.95
SRSF1-201ENST00000258962 UQCRFS1P1P0C7P4 283 aa20.98■□□□□ 0.95
SRSF1-201ENST00000258962 STRIP1Q5VSL9 837 aa20.98■□□□□ 0.95
SRSF1-201ENST00000258962 TTLL5Q6EMB2 1281 aa20.98■□□□□ 0.95
SRSF1-201ENST00000258962 CHADLQ6NUI6 762 aa20.98■□□□□ 0.95
SRSF1-201ENST00000258962 RSBN1LQ6PCB5 846 aaPredicted RBP20.98■□□□□ 0.95
SRSF1-201ENST00000258962 USP50Q70EL3 339 aaPredicted RBP20.98■□□□□ 0.95
SRSF1-201ENST00000258962 VPS37DQ86XT2 251 aa20.98■□□□□ 0.95
SRSF1-201ENST00000258962 MICALL2Q8IY33 904 aa20.98■□□□□ 0.95
SRSF1-201ENST00000258962 AGBL3Q8NEM8 1001 aa20.98■□□□□ 0.95
SRSF1-201ENST00000258962 POTEIP0CG38 1075 aa20.97■□□□□ 0.95
SRSF1-201ENST00000258962 POTEJP0CG39 1038 aa20.97■□□□□ 0.95
SRSF1-201ENST00000258962 HIBADHP31937 336 aaKnown RBP20.97■□□□□ 0.95
SRSF1-201ENST00000258962 ANAPC15P60006 121 aa20.97■□□□□ 0.95
SRSF1-201ENST00000258962 CAVIN4Q5BKX8 364 aa20.97■□□□□ 0.95
SRSF1-201ENST00000258962 IRS2Q9Y4H2 1338 aa20.97■□□□□ 0.95
SRSF1-201ENST00000258962 GTF2IP78347 998 aa20.96■□□□□ 0.95
SRSF1-201ENST00000258962 SLFNL1Q499Z3 407 aa20.96■□□□□ 0.95
SRSF1-201ENST00000258962 SEC62Q99442 399 aaKnown RBP20.96■□□□□ 0.95
SRSF1-201ENST00000258962 GYG1P46976 350 aa20.95■□□□□ 0.94
SRSF1-201ENST00000258962 ZMYM1Q5SVZ6 1142 aa20.95■□□□□ 0.94
SRSF1-201ENST00000258962 HSCBQ8IWL3 235 aa20.95■□□□□ 0.94
SRSF1-201ENST00000258962 FAM84BQ96KN1 310 aaPredicted RBP20.95■□□□□ 0.94
SRSF1-201ENST00000258962 MYH13Q9UKX3 1938 aa20.95■□□□□ 0.94
SRSF1-201ENST00000258962 SCN9AQ15858 1988 aa20.95■□□□□ 0.94
SRSF1-201ENST00000258962 RNF113AO15541 343 aaKnown RBP20.94■□□□□ 0.94
SRSF1-201ENST00000258962 CYP2E1P05181 493 aaPredicted RBP20.94■□□□□ 0.94
SRSF1-201ENST00000258962 IL1R1P14778 569 aa20.94■□□□□ 0.94
SRSF1-201ENST00000258962 DACT2Q5SW24 774 aa20.94■□□□□ 0.94
SRSF1-201ENST00000258962 MAP4K1Q92918 833 aa20.94■□□□□ 0.94
SRSF1-201ENST00000258962 HMG20BQ9P0W2 317 aa20.94■□□□□ 0.94
SRSF1-201ENST00000258962 USP17L8P0C7I0 530 aa20.94■□□□□ 0.94
SRSF1-201ENST00000258962 BCAMP50895 628 aa20.94■□□□□ 0.94
SRSF1-201ENST00000258962 RASGRF1Q13972 1273 aa20.94■□□□□ 0.94
SRSF1-201ENST00000258962 MCMDC2Q4G0Z9 681 aa20.94■□□□□ 0.94
SRSF1-201ENST00000258962 CCDC129Q6ZRS4 1044 aa20.94■□□□□ 0.94
SRSF1-201ENST00000258962 HELLSQ9NRZ9 838 aa20.94■□□□□ 0.94
SRSF1-201ENST00000258962 MYO3BQ8WXR4 1341 aa20.93■□□□□ 0.94
SRSF1-201ENST00000258962 FRAT2O75474 233 aaPredicted RBP20.93■□□□□ 0.94
SRSF1-201ENST00000258962 OGFOD1Q8N543 542 aa20.93■□□□□ 0.94
SRSF1-201ENST00000258962 PIH1D3Q9NQM4 214 aaKnown RBP20.93■□□□□ 0.94
SRSF1-201ENST00000258962 RBM8AQ9Y5S9 174 aaKnown RBP20.93■□□□□ 0.94
SRSF1-201ENST00000258962 SNX14Q9Y5W7 946 aa20.93■□□□□ 0.94
SRSF1-201ENST00000258962 SHTN1A0MZ66 631 aa20.92■□□□□ 0.94
SRSF1-201ENST00000258962 HSPA6P17066 643 aa20.92■□□□□ 0.94
SRSF1-201ENST00000258962 NECTIN1Q15223 517 aa20.92■□□□□ 0.94
SRSF1-201ENST00000258962 RBM26Q5T8P6 1007 aaKnown RBP20.92■□□□□ 0.94
SRSF1-201ENST00000258962 FBXO33Q7Z6M2 555 aa20.92■□□□□ 0.94
SRSF1-201ENST00000258962 RASEFQ8IZ41 740 aa20.92■□□□□ 0.94
SRSF1-201ENST00000258962 SPATA5Q8NB90 893 aa20.92■□□□□ 0.94
SRSF1-201ENST00000258962 KCNB2Q92953 911 aa20.92■□□□□ 0.94
SRSF1-201ENST00000258962 GMLQ99445 158 aa20.92■□□□□ 0.94
SRSF1-201ENST00000258962 TBC1D10BQ4KMP7 808 aaPredicted RBP20.91■□□□□ 0.94
SRSF1-201ENST00000258962 SAMD7Q7Z3H4 446 aa20.91■□□□□ 0.94
SRSF1-201ENST00000258962 TDRD7Q8NHU6 1098 aaKnown RBP20.91■□□□□ 0.94
SRSF1-201ENST00000258962 MXD3Q9BW11 206 aa20.91■□□□□ 0.94
SRSF1-201ENST00000258962 MAST3O60307 1309 aa20.91■□□□□ 0.94
SRSF1-201ENST00000258962 COL1A1P02452 1464 aaPredicted RBP20.91■□□□□ 0.94
SRSF1-201ENST00000258962 ZFYP08048 801 aaPredicted RBP20.9■□□□□ 0.94
SRSF1-201ENST00000258962 TTF1Q15361 905 aaPredicted RBP20.9■□□□□ 0.94
SRSF1-201ENST00000258962 MAP1SQ66K74 1059 aaPredicted RBP20.9■□□□□ 0.94
SRSF1-201ENST00000258962 TRPM4Q8TD43 1214 aa20.9■□□□□ 0.94
SRSF1-201ENST00000258962 K7ELQ4 463 aaPredicted RBP20.89■□□□□ 0.94
SRSF1-201ENST00000258962 MMP14P50281 582 aa20.89■□□□□ 0.94
SRSF1-201ENST00000258962 ZNF280AP59817 542 aaPredicted RBP20.89■□□□□ 0.94
SRSF1-201ENST00000258962 LRRFIP1Q32MZ4 808 aaKnown RBP20.89■□□□□ 0.94
SRSF1-201ENST00000258962 ZC3H15Q8WU90 426 aaKnown RBP20.89■□□□□ 0.94
SRSF1-201ENST00000258962 OSBP2Q969R2 916 aa20.89■□□□□ 0.94
SRSF1-201ENST00000258962 M0R2C6 588 aa20.88■□□□□ 0.93
SRSF1-201ENST00000258962 HIRAP54198 1017 aaPredicted RBP20.88■□□□□ 0.93
SRSF1-201ENST00000258962 HDAC9Q9UKV0 1011 aa20.88■□□□□ 0.93
SRSF1-201ENST00000258962 IQSEC3Q9UPP2 1182 aaPredicted RBP20.88■□□□□ 0.93
SRSF1-201ENST00000258962 FAM205AQ6ZU69 1335 aa20.88■□□□□ 0.93
SRSF1-201ENST00000258962 ADD2P35612 726 aa20.88■□□□□ 0.93
SRSF1-201ENST00000258962 KIF4BQ2VIQ3 1234 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms