RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 C2CD5Q86YS7 1000 aa32.77■■■□□ 2.84
CCM2-201ENST00000258781 PDIA4P13667 645 aaKnown RBP32.76■■■□□ 2.84
CCM2-201ENST00000258781 GYG1P46976 350 aa32.76■■■□□ 2.84
CCM2-201ENST00000258781 AIDAQ96BJ3 306 aa32.76■■■□□ 2.84
CCM2-201ENST00000258781 ZMYM6O95789 1325 aa32.76■■■□□ 2.83
CCM2-201ENST00000258781 STX6O43752 255 aa32.76■■■□□ 2.83
CCM2-201ENST00000258781 SYT1P21579 422 aa32.76■■■□□ 2.83
CCM2-201ENST00000258781 STRBPQ96SI9 672 aaKnown RBP32.76■■■□□ 2.83
CCM2-201ENST00000258781 ANKIB1Q9P2G1 1089 aa32.76■■■□□ 2.83
CCM2-201ENST00000258781 PPEF1O14829 653 aaPredicted RBP32.75■■■□□ 2.83
CCM2-201ENST00000258781 SEMA3EO15041 775 aa32.75■■■□□ 2.83
CCM2-201ENST00000258781 CHRNA5P30532 468 aa32.75■■■□□ 2.83
CCM2-201ENST00000258781 XDHP47989 1333 aa32.74■■■□□ 2.83
CCM2-201ENST00000258781 ALX1Q15699 326 aa32.74■■■□□ 2.83
CCM2-201ENST00000258781 FOXD4L5Q5VV16 416 aaPredicted RBP32.74■■■□□ 2.83
CCM2-201ENST00000258781 FBXO33Q7Z6M2 555 aa32.74■■■□□ 2.83
CCM2-201ENST00000258781 FBXL16Q8N461 479 aa32.74■■■□□ 2.83
CCM2-201ENST00000258781 FOXD4L4Q8WXT5 416 aaPredicted RBP32.74■■■□□ 2.83
CCM2-201ENST00000258781 FAM84BQ96KN1 310 aaPredicted RBP32.74■■■□□ 2.83
CCM2-201ENST00000258781 DENND2AQ9ULE3 1009 aa32.74■■■□□ 2.83
CCM2-201ENST00000258781 ATF5Q9Y2D1 282 aaPredicted RBP32.74■■■□□ 2.83
CCM2-201ENST00000258781 KIF13BQ9NQT8 1826 aa32.74■■■□□ 2.83
CCM2-201ENST00000258781 PSDA5PKW4 1024 aaPredicted RBP32.74■■■□□ 2.83
CCM2-201ENST00000258781 ZNF213O14771 459 aa32.74■■■□□ 2.83
CCM2-201ENST00000258781 ZSCAN22P10073 491 aaPredicted RBP32.74■■■□□ 2.83
CCM2-201ENST00000258781 GPSM2P81274 684 aa32.74■■■□□ 2.83
CCM2-201ENST00000258781 FGD1P98174 961 aa32.74■■■□□ 2.83
CCM2-201ENST00000258781 GTF3C6Q969F1 213 aa32.74■■■□□ 2.83
CCM2-201ENST00000258781 LMBRD1Q9NUN5 540 aa32.74■■■□□ 2.83
CCM2-201ENST00000258781 COL1A1P02452 1464 aaPredicted RBP32.73■■■□□ 2.83
CCM2-201ENST00000258781 DLEC1Q9Y238 1755 aa32.73■■■□□ 2.83
CCM2-201ENST00000258781 PDS5AQ29RF7 1337 aaKnown RBP32.73■■■□□ 2.83
CCM2-201ENST00000258781 ILDR2Q71H61 639 aa32.73■■■□□ 2.83
CCM2-201ENST00000258781 VPS37DQ86XT2 251 aa32.73■■■□□ 2.83
CCM2-201ENST00000258781 BRF1Q92994 677 aa32.73■■■□□ 2.83
CCM2-201ENST00000258781 ZNF622Q969S3 477 aaKnown RBP eCLIP32.73■■■□□ 2.83
CCM2-201ENST00000258781 MTFR1LQ9H019 292 aa32.73■■■□□ 2.83
CCM2-201ENST00000258781 SLX4Q8IY92 1834 aa32.73■■■□□ 2.83
CCM2-201ENST00000258781 IRS2Q9Y4H2 1338 aa32.72■■■□□ 2.83
CCM2-201ENST00000258781 H0YIN7 160 aa32.72■■■□□ 2.83
CCM2-201ENST00000258781 ZBTB22O15209 634 aa32.72■■■□□ 2.83
CCM2-201ENST00000258781 LRP2BPQ9P2M1 347 aa32.72■■■□□ 2.83
CCM2-201ENST00000258781 ALDH1B1P30837 517 aa32.71■■■□□ 2.83
CCM2-201ENST00000258781 HAND2P61296 217 aa32.71■■■□□ 2.83
CCM2-201ENST00000258781 TXNRD3Q86VQ6 643 aa32.71■■■□□ 2.83
CCM2-201ENST00000258781 NSFL1CQ9UNZ2 370 aaKnown RBP32.71■■■□□ 2.83
CCM2-201ENST00000258781 MBD4O95243 580 aa32.7■■■□□ 2.83
CCM2-201ENST00000258781 KLHL40Q2TBA0 621 aa32.7■■■□□ 2.83
CCM2-201ENST00000258781 OLFM4Q6UX06 510 aa32.7■■■□□ 2.83
CCM2-201ENST00000258781 WDR19Q8NEZ3 1342 aa32.7■■■□□ 2.82
CCM2-201ENST00000258781 GNAT2P19087 354 aa32.69■■■□□ 2.82
CCM2-201ENST00000258781 TMC4Q7Z404 712 aa32.69■■■□□ 2.82
CCM2-201ENST00000258781 LRRC2Q9BYS8 371 aa32.69■■■□□ 2.82
CCM2-201ENST00000258781 IQSEC3Q9UPP2 1182 aaPredicted RBP32.69■■■□□ 2.82
CCM2-201ENST00000258781 ATP6V0A2Q9Y487 856 aa32.69■■■□□ 2.82
CCM2-201ENST00000258781 CHD4Q14839 1912 aa32.69■■■□□ 2.82
CCM2-201ENST00000258781 PATL2C9JE40 543 aaKnown RBP32.69■■■□□ 2.82
CCM2-201ENST00000258781 PDCP20941 246 aa32.69■■■□□ 2.82
CCM2-201ENST00000258781 STYK1Q6J9G0 422 aa32.69■■■□□ 2.82
CCM2-201ENST00000258781 SP8Q8IXZ3 490 aa32.69■■■□□ 2.82
CCM2-201ENST00000258781 NCOA7Q8NI08 942 aa32.69■■■□□ 2.82
CCM2-201ENST00000258781 GPR101Q96P66 508 aaPredicted RBP32.69■■■□□ 2.82
CCM2-201ENST00000258781 LEMD3Q9Y2U8 911 aa32.69■■■□□ 2.82
CCM2-201ENST00000258781 PFKFB2O60825 505 aa32.68■■■□□ 2.82
CCM2-201ENST00000258781 APPP05067 770 aa32.68■■■□□ 2.82
CCM2-201ENST00000258781 STK3Q13188 491 aa32.68■■■□□ 2.82
CCM2-201ENST00000258781 MB21D2Q8IYB1 491 aaPredicted RBP32.68■■■□□ 2.82
CCM2-201ENST00000258781 DUOX1Q9NRD9 1551 aa32.67■■■□□ 2.82
CCM2-201ENST00000258781 MCM5P33992 734 aa32.67■■■□□ 2.82
CCM2-201ENST00000258781 GZF1Q9H116 711 aaPredicted RBP32.67■■■□□ 2.82
CCM2-201ENST00000258781 PODXL2Q9NZ53 605 aa32.67■■■□□ 2.82
CCM2-201ENST00000258781 DDX49Q9Y6V7 483 aaKnown RBP32.67■■■□□ 2.82
CCM2-201ENST00000258781 TIAM2Q8IVF5 1701 aa32.66■■■□□ 2.82
CCM2-201ENST00000258781 F13A1P00488 732 aa32.66■■■□□ 2.82
CCM2-201ENST00000258781 HIBADHP31937 336 aaKnown RBP32.66■■■□□ 2.82
CCM2-201ENST00000258781 RALYLQ86SE5 291 aaKnown RBP32.66■■■□□ 2.82
CCM2-201ENST00000258781 LLPHQ9BRT6 129 aaKnown RBP32.66■■■□□ 2.82
CCM2-201ENST00000258781 MTMR6Q9Y217 621 aa32.66■■■□□ 2.82
CCM2-201ENST00000258781 ATP6V1DQ9Y5K8 247 aa32.66■■■□□ 2.82
CCM2-201ENST00000258781 KIAA1551Q9HCM1 1747 aa32.65■■■□□ 2.82
CCM2-201ENST00000258781 UFL1O94874 794 aa32.65■■■□□ 2.82
CCM2-201ENST00000258781 ZNF274Q96GC6 653 aaPredicted RBP32.65■■■□□ 2.82
CCM2-201ENST00000258781 NBPF3Q9H094 633 aa32.65■■■□□ 2.82
CCM2-201ENST00000258781 ARMT1Q9H993 441 aa32.65■■■□□ 2.82
CCM2-201ENST00000258781 MAST2Q6P0Q8 1798 aa32.65■■■□□ 2.82
CCM2-201ENST00000258781 EVCP57679 992 aa32.65■■■□□ 2.82
CCM2-201ENST00000258781 CHMP4CQ96CF2 233 aa32.65■■■□□ 2.82
CCM2-201ENST00000258781 POLLQ9UGP5 575 aa32.65■■■□□ 2.82
CCM2-201ENST00000258781 PRPF40AO75400 957 aaKnown RBP32.64■■■□□ 2.82
CCM2-201ENST00000258781 APOBRQ0VD83 1088 aa32.64■■■□□ 2.82
CCM2-201ENST00000258781 ABCF2Q9UG63 623 aa32.64■■■□□ 2.82
CCM2-201ENST00000258781 GGA1Q9UJY5 639 aa32.64■■■□□ 2.82
CCM2-201ENST00000258781 TCHHQ07283 1943 aa32.64■■■□□ 2.82
CCM2-201ENST00000258781 CYP7A1P22680 504 aa32.63■■■□□ 2.81
CCM2-201ENST00000258781 LARP1BQ659C4 914 aaKnown RBP32.63■■■□□ 2.81
CCM2-201ENST00000258781 IFNL3Q8IZI9 196 aa32.63■■■□□ 2.81
CCM2-201ENST00000258781 EPB41L4AQ9HCS5 686 aaPredicted RBP32.63■■■□□ 2.81
CCM2-201ENST00000258781 RAI14Q9P0K7 980 aa32.63■■■□□ 2.81
CCM2-201ENST00000258781 POLD1P28340 1107 aa32.63■■■□□ 2.81
CCM2-201ENST00000258781 TRDNQ13061 729 aa32.63■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms