RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 COG7P83436 770 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 CASP10Q92851 521 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 EIF2AQ9BY44 585 aaKnown RBP7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 ACTR5Q9H9F9 607 aaPredicted RBP7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 STIM2Q9P246 746 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 SEL1LQ9UBV2 794 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 TRIM35Q9UPQ4 493 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 HIP1RO75146 1068 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 CORO7P57737 925 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 C1orf141Q5JVX7 400 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 ANKRD7Q92527 254 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 GFM2Q969S9 779 aaKnown RBP7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 LTV1Q96GA3 475 aaPredicted RBP7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 ADCY10Q96PN6 1610 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 LSM1O15116 133 aaKnown RBP7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 HCLS1P14317 486 aaPredicted RBP7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 PTGS1P23219 599 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 COPB2P35606 906 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 MSANTD4Q8NCY6 345 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 SMC1BQ8NDV3 1235 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 TARSL2A2RTX5 802 aaKnown RBP7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 PAPOLAP51003 745 aaKnown RBP7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 PPP2R3AQ06190 1150 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 BIRC3Q13489 604 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 CACNA2D4Q7Z3S7 1137 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 RAB11FIP4Q86YS3 637 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 CCDC83Q8IWF9 413 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 CHCHD4Q8N4Q1 142 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 BCAS4Q8TDM0 211 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 ALS2CR12Q96Q35 445 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 IL16Q14005 1332 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 CTAGE15A4D2H0 777 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 H3BQV1 296 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 CTAGE8P0CG41 777 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 MYBL2P10244 700 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 TUBA1BP68363 451 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 CFAP100Q494V2 611 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 IFFO2Q5TF58 517 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 TUBA1AQ71U36 451 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 CTAGE6Q86UF2 777 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 CTAGE4Q8IX94 777 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 GPR161Q8N6U8 529 aaKnown RBP7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 TTC1Q99614 292 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 PREX2Q70Z35 1606 aa7.6□□□□□ -1.19
PDGFRA-201ENST00000257290 GNG11P61952 73 aa7.59□□□□□ -1.19
PDGFRA-201ENST00000257290 CFAP58Q5T655 872 aa7.59□□□□□ -1.19
PDGFRA-201ENST00000257290 NR1H4Q96RI1 486 aaPredicted RBP7.59□□□□□ -1.19
PDGFRA-201ENST00000257290 ZNF148Q9UQR1 794 aa7.59□□□□□ -1.19
PDGFRA-201ENST00000257290 ZCCHC11Q5TAX3 1644 aaKnown RBP7.59□□□□□ -1.19
PDGFRA-201ENST00000257290 CDC45O75419 566 aa7.59□□□□□ -1.19
PDGFRA-201ENST00000257290 GNAI1P63096 354 aa7.59□□□□□ -1.19
PDGFRA-201ENST00000257290 INTS3Q68E01 1043 aaKnown RBP7.59□□□□□ -1.19
PDGFRA-201ENST00000257290 OLFM4Q6UX06 510 aa7.59□□□□□ -1.19
PDGFRA-201ENST00000257290 NOP53Q9NZM5 478 aaKnown RBP7.59□□□□□ -1.19
PDGFRA-201ENST00000257290 ADAMTS8Q9UP79 889 aa7.59□□□□□ -1.19
PDGFRA-201ENST00000257290 NSD3Q9BZ95 1437 aa7.59□□□□□ -1.19
PDGFRA-201ENST00000257290 TNRQ92752 1358 aa7.59□□□□□ -1.19
PDGFRA-201ENST00000257290 VPS41P49754 854 aa7.59□□□□□ -1.19
PDGFRA-201ENST00000257290 ISM2Q6H9L7 571 aa7.59□□□□□ -1.19
PDGFRA-201ENST00000257290 CPLX4Q7Z7G2 160 aa7.59□□□□□ -1.19
PDGFRA-201ENST00000257290 IQCF2Q8IXL9 164 aa7.59□□□□□ -1.19
PDGFRA-201ENST00000257290 CNNM3Q8NE01 707 aa7.59□□□□□ -1.19
PDGFRA-201ENST00000257290 SEC62Q99442 399 aaKnown RBP7.59□□□□□ -1.19
PDGFRA-201ENST00000257290 LZTS2Q9BRK4 669 aa7.59□□□□□ -1.19
PDGFRA-201ENST00000257290 TSPAN9O75954 239 aa7.59□□□□□ -1.19
PDGFRA-201ENST00000257290 PNMA6AP0CW24 399 aaPredicted RBP7.59□□□□□ -1.19
PDGFRA-201ENST00000257290 LMNB1P20700 586 aa7.59□□□□□ -1.19
PDGFRA-201ENST00000257290 HNRNPH1P31943 449 aaKnown RBP7.59□□□□□ -1.19
PDGFRA-201ENST00000257290 MRGBPQ9NV56 204 aa7.59□□□□□ -1.19
PDGFRA-201ENST00000257290 MTHFSP49914 203 aa7.59□□□□□ -1.2
PDGFRA-201ENST00000257290 C8orf34Q49A92 452 aa7.59□□□□□ -1.2
PDGFRA-201ENST00000257290 SEPT8Q92599 483 aa7.59□□□□□ -1.2
PDGFRA-201ENST00000257290 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.59□□□□□ -1.2
PDGFRA-201ENST00000257290 JADE2Q9NQC1 790 aa7.59□□□□□ -1.2
PDGFRA-201ENST00000257290 ATP6V0A2Q9Y487 856 aa7.59□□□□□ -1.2
PDGFRA-201ENST00000257290 NSD2O96028 1365 aa7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 SERPINC1P01008 464 aa7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 KRT4P19013 534 aa7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 FAAH2Q6GMR7 532 aa7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 MAP7D3Q8IWC1 876 aa7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 AMOTL1Q8IY63 956 aa7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 API5Q9BZZ5 524 aaKnown RBP7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 NDEL1Q9GZM8 345 aa7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 SLC12A5Q9H2X9 1139 aa7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 CABP1Q9NZU7 370 aa7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 ATP8A1Q9Y2Q0 1164 aa7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 AKNAD1Q5T1N1 836 aa7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 UHRF1BP1Q6BDS2 1440 aa7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 SAMD9LQ8IVG5 1584 aa7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 PEX5LQ8IYB4 626 aa7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 KCNV2Q8TDN2 545 aa7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 TSG101Q99816 390 aa7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 EIF2S2P20042 333 aaKnown RBP7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 IDI1Q13907 227 aa7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 GAS2L3Q86XJ1 694 aa7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 ADAM21Q9UKJ8 722 aa7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 LRRIQ3A6PVS8 624 aaPredicted RBP7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 NOL3O60936 208 aaKnown RBP7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 KIF5AQ12840 1032 aa7.58□□□□□ -1.2
PDGFRA-201ENST00000257290 FGD4Q96M96 766 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms