RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 KCNA3P22001 575 aa11.31□□□□□ -0.6
NIP7-202ENST00000254941 CHAF1AQ13111 956 aaPredicted RBP11.31□□□□□ -0.6
NIP7-202ENST00000254941 CC2D2BQ6DHV5 1058 aa11.31□□□□□ -0.6
NIP7-202ENST00000254941 ERICH6Q7L0X2 663 aa11.31□□□□□ -0.6
NIP7-202ENST00000254941 TM6SF1Q9BZW5 370 aa11.31□□□□□ -0.6
NIP7-202ENST00000254941 RAI14Q9P0K7 980 aa11.31□□□□□ -0.6
NIP7-202ENST00000254941 SPTY2D1Q68D10 685 aaPredicted RBP11.3□□□□□ -0.6
NIP7-202ENST00000254941 TTLL6Q8N841 843 aa11.3□□□□□ -0.6
NIP7-202ENST00000254941 ZNF384Q8TF68 577 aa11.3□□□□□ -0.6
NIP7-202ENST00000254941 AIDAQ96BJ3 306 aa11.3□□□□□ -0.6
NIP7-202ENST00000254941 STRBPQ96SI9 672 aaKnown RBP11.3□□□□□ -0.6
NIP7-202ENST00000254941 SGIP1Q9BQI5 828 aa11.3□□□□□ -0.6
NIP7-202ENST00000254941 RTFDC1Q9BY42 306 aaPredicted RBP11.3□□□□□ -0.6
NIP7-202ENST00000254941 ZC3H12CQ9C0D7 883 aaKnown RBP11.3□□□□□ -0.6
NIP7-202ENST00000254941 COA1Q9GZY4 146 aa11.3□□□□□ -0.6
NIP7-202ENST00000254941 RPAP1Q9BWH6 1393 aaPredicted RBP11.3□□□□□ -0.6
NIP7-202ENST00000254941 A0A0G2JLW4 131 aa11.29□□□□□ -0.6
NIP7-202ENST00000254941 K7ELQ4 463 aaPredicted RBP11.29□□□□□ -0.6
NIP7-202ENST00000254941 CYP21A2P08686 494 aa11.29□□□□□ -0.6
NIP7-202ENST00000254941 CYP7A1P22680 504 aa11.29□□□□□ -0.6
NIP7-202ENST00000254941 PRDX5P30044 214 aa11.29□□□□□ -0.6
NIP7-202ENST00000254941 TGFB2P61812 414 aa11.29□□□□□ -0.6
NIP7-202ENST00000254941 ADCK5Q3MIX3 580 aa11.29□□□□□ -0.6
NIP7-202ENST00000254941 NSUN4Q96CB9 384 aaKnown RBP11.29□□□□□ -0.6
NIP7-202ENST00000254941 EYA3Q99504 573 aa11.29□□□□□ -0.6
NIP7-202ENST00000254941 UPF3BQ9BZI7 483 aaKnown RBP11.29□□□□□ -0.6
NIP7-202ENST00000254941 MBD4O95243 580 aa11.29□□□□□ -0.6
NIP7-202ENST00000254941 FGAP02671 866 aa11.29□□□□□ -0.6
NIP7-202ENST00000254941 DPEP1P16444 411 aa11.29□□□□□ -0.6
NIP7-202ENST00000254941 MECOMQ03112 1051 aa11.29□□□□□ -0.6
NIP7-202ENST00000254941 KRT32Q14532 448 aa11.29□□□□□ -0.6
NIP7-202ENST00000254941 GRIPAP1Q4V328 841 aa11.29□□□□□ -0.6
NIP7-202ENST00000254941 NAA16Q6N069 864 aaPredicted RBP11.29□□□□□ -0.6
NIP7-202ENST00000254941 ADGRA1Q86SQ6 560 aa11.29□□□□□ -0.6
NIP7-202ENST00000254941 ZSWIM6Q9HCJ5 1215 aa11.29□□□□□ -0.6
NIP7-202ENST00000254941 CTNNA3Q9UI47 895 aa11.29□□□□□ -0.6
NIP7-202ENST00000254941 TAF6LQ9Y6J9 622 aa11.29□□□□□ -0.6
NIP7-202ENST00000254941 BAZ2AQ9UIF9 1905 aaKnown RBP11.29□□□□□ -0.6
NIP7-202ENST00000254941 SCN9AQ15858 1988 aa11.29□□□□□ -0.6
NIP7-202ENST00000254941 RIMBP2O15034 1052 aa11.28□□□□□ -0.6
NIP7-202ENST00000254941 GNAT2P19087 354 aa11.28□□□□□ -0.6
NIP7-202ENST00000254941 CASTP20810 708 aaKnown RBP11.28□□□□□ -0.6
NIP7-202ENST00000254941 PSMA5P28066 241 aa11.28□□□□□ -0.6
NIP7-202ENST00000254941 MCM2P49736 904 aa11.28□□□□□ -0.6
NIP7-202ENST00000254941 JAKMIP1Q96N16 626 aaKnown RBP11.28□□□□□ -0.6
NIP7-202ENST00000254941 JAG2Q9Y219 1238 aa11.28□□□□□ -0.6
NIP7-202ENST00000254941 FAM205AQ6ZU69 1335 aa11.28□□□□□ -0.6
NIP7-202ENST00000254941 ZNF646O15015 1829 aaPredicted RBP11.28□□□□□ -0.6
NIP7-202ENST00000254941 PSDA5PKW4 1024 aaPredicted RBP11.27□□□□□ -0.6
NIP7-202ENST00000254941 HAX1O00165 279 aa11.27□□□□□ -0.6
NIP7-202ENST00000254941 LDHBP07195 334 aaKnown RBP11.27□□□□□ -0.6
NIP7-202ENST00000254941 ALX1Q15699 326 aa11.27□□□□□ -0.6
NIP7-202ENST00000254941 RUFY3Q7L099 469 aa11.27□□□□□ -0.6
NIP7-202ENST00000254941 MIGA1Q8NAN2 632 aa11.27□□□□□ -0.6
NIP7-202ENST00000254941 TBC1D22AQ8WUA7 517 aa11.27□□□□□ -0.6
NIP7-202ENST00000254941 TTC14Q96N46 770 aa11.27□□□□□ -0.6
NIP7-202ENST00000254941 RIOK1Q9BRS2 568 aaKnown RBP11.27□□□□□ -0.6
NIP7-202ENST00000254941 ARMT1Q9H993 441 aa11.27□□□□□ -0.6
NIP7-202ENST00000254941 CYP46A1Q9Y6A2 500 aa11.27□□□□□ -0.6
NIP7-202ENST00000254941 ZMYM6O95789 1325 aa11.27□□□□□ -0.6
NIP7-202ENST00000254941 PSME4Q14997 1843 aa11.27□□□□□ -0.6
NIP7-202ENST00000254941 CDK5RAP2Q96SN8 1893 aa11.27□□□□□ -0.6
NIP7-202ENST00000254941 MAGEB6P1A0A0J9YX57 407 aa11.27□□□□□ -0.61
NIP7-202ENST00000254941 PATL2C9JE40 543 aaKnown RBP11.27□□□□□ -0.61
NIP7-202ENST00000254941 C21orf2O43822 256 aa11.27□□□□□ -0.61
NIP7-202ENST00000254941 TTLL5Q6EMB2 1281 aa11.27□□□□□ -0.61
NIP7-202ENST00000254941 DZIP1Q86YF9 867 aaKnown RBP11.27□□□□□ -0.61
NIP7-202ENST00000254941 LCORLQ8N3X6 602 aa11.27□□□□□ -0.61
NIP7-202ENST00000254941 FER1L6Q2WGJ9 1857 aa11.26□□□□□ -0.61
NIP7-202ENST00000254941 GSG1L2A8MUP6 293 aa11.26□□□□□ -0.61
NIP7-202ENST00000254941 APPP05067 770 aa11.26□□□□□ -0.61
NIP7-202ENST00000254941 PTGER2P43116 358 aa11.26□□□□□ -0.61
NIP7-202ENST00000254941 IMMTQ16891 758 aaKnown RBP11.26□□□□□ -0.61
NIP7-202ENST00000254941 MFSD14BQ5SR56 506 aa11.26□□□□□ -0.61
NIP7-202ENST00000254941 PODNQ7Z5L7 613 aa11.26□□□□□ -0.61
NIP7-202ENST00000254941 RTKN2Q8IZC4 609 aa11.26□□□□□ -0.61
NIP7-202ENST00000254941 SUPT20HQ8NEM7 779 aa11.26□□□□□ -0.61
NIP7-202ENST00000254941 PIM2Q9P1W9 311 aa11.26□□□□□ -0.61
NIP7-202ENST00000254941 CD2APQ9Y5K6 639 aa11.26□□□□□ -0.61
NIP7-202ENST00000254941 SRCAPQ6ZRS2 3230 aa11.26□□□□□ -0.61
NIP7-202ENST00000254941 GTF2IP78347 998 aa11.25□□□□□ -0.61
NIP7-202ENST00000254941 GRIK5Q16478 980 aa11.25□□□□□ -0.61
NIP7-202ENST00000254941 DOK7Q18PE1 504 aa11.25□□□□□ -0.61
NIP7-202ENST00000254941 CCDC93Q567U6 631 aa11.25□□□□□ -0.61
NIP7-202ENST00000254941 BLOC1S2Q6QNY1 142 aa11.25□□□□□ -0.61
NIP7-202ENST00000254941 IFNL3Q8IZI9 196 aa11.25□□□□□ -0.61
NIP7-202ENST00000254941 NEK1Q96PY6 1258 aa11.25□□□□□ -0.61
NIP7-202ENST00000254941 SUGT1Q9Y2Z0 365 aa11.25□□□□□ -0.61
NIP7-202ENST00000254941 E7EWF7 191 aa11.25□□□□□ -0.61
NIP7-202ENST00000254941 G3V3G9 751 aa11.25□□□□□ -0.61
NIP7-202ENST00000254941 ZNF213O14771 459 aa11.25□□□□□ -0.61
NIP7-202ENST00000254941 HMGB1P09429 215 aaKnown RBP11.25□□□□□ -0.61
NIP7-202ENST00000254941 CPA1P15085 419 aa11.25□□□□□ -0.61
NIP7-202ENST00000254941 RPS6KB1P23443 525 aa11.25□□□□□ -0.61
NIP7-202ENST00000254941 GSTO1P78417 241 aa11.25□□□□□ -0.61
NIP7-202ENST00000254941 KIAA2012Q0VF49 1180 aa11.25□□□□□ -0.61
NIP7-202ENST00000254941 COL9A3Q14050 684 aaPredicted RBP11.25□□□□□ -0.61
NIP7-202ENST00000254941 DCAF8Q5TAQ9 597 aa11.25□□□□□ -0.61
NIP7-202ENST00000254941 SOGA3Q5TF21 947 aa11.25□□□□□ -0.61
NIP7-202ENST00000254941 STOX1Q6ZVD7 989 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms