RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 DHX40Q8IX18 779 aaKnown RBP18.23■□□□□ 0.51
SLC6A8-201ENST00000253122 GPATCH11Q8N954 259 aa18.23■□□□□ 0.51
SLC6A8-201ENST00000253122 ZNF569Q5MCW4 686 aa18.22■□□□□ 0.51
SLC6A8-201ENST00000253122 NBPF6Q5VWK0 638 aa18.22■□□□□ 0.51
SLC6A8-201ENST00000253122 ANO1Q5XXA6 986 aa18.22■□□□□ 0.51
SLC6A8-201ENST00000253122 ATL3Q6DD88 541 aa18.22■□□□□ 0.51
SLC6A8-201ENST00000253122 NBPF4Q96M43 638 aa18.22■□□□□ 0.51
SLC6A8-201ENST00000253122 EFCAB8A8MWE9 144 aa18.22■□□□□ 0.51
SLC6A8-201ENST00000253122 CHGBP05060 677 aa18.22■□□□□ 0.51
SLC6A8-201ENST00000253122 STX17P56962 302 aa18.22■□□□□ 0.51
SLC6A8-201ENST00000253122 COL9A3Q14050 684 aaPredicted RBP18.22■□□□□ 0.51
SLC6A8-201ENST00000253122 NYAP1Q6ZVC0 841 aa18.22■□□□□ 0.51
SLC6A8-201ENST00000253122 KLHL34Q8N239 644 aa18.22■□□□□ 0.51
SLC6A8-201ENST00000253122 CABLES1Q8TDN4 633 aa18.22■□□□□ 0.51
SLC6A8-201ENST00000253122 PAG1Q9NWQ8 432 aa18.22■□□□□ 0.51
SLC6A8-201ENST00000253122 MST1RQ04912 1400 aa18.22■□□□□ 0.51
SLC6A8-201ENST00000253122 PFKFB2O60825 505 aa18.22■□□□□ 0.51
SLC6A8-201ENST00000253122 PNOCQ13519 176 aa18.22■□□□□ 0.51
SLC6A8-201ENST00000253122 SLFNL1Q499Z3 407 aa18.22■□□□□ 0.51
SLC6A8-201ENST00000253122 TNNI3KQ59H18 835 aa18.22■□□□□ 0.51
SLC6A8-201ENST00000253122 FPGT-TNNI3KV9GXZ4 949 aa18.22■□□□□ 0.51
SLC6A8-201ENST00000253122 ANKRD13DQ6ZTN6 518 aa18.21■□□□□ 0.51
SLC6A8-201ENST00000253122 NUP133Q8WUM0 1156 aa18.21■□□□□ 0.51
SLC6A8-201ENST00000253122 GJB4Q9NTQ9 266 aa18.21■□□□□ 0.51
SLC6A8-201ENST00000253122 FANCLQ9NW38 375 aa18.21■□□□□ 0.51
SLC6A8-201ENST00000253122 CRB1P82279 1406 aa18.21■□□□□ 0.51
SLC6A8-201ENST00000253122 ARHGAP6O43182 974 aa18.21■□□□□ 0.51
SLC6A8-201ENST00000253122 CCDC175P0C221 793 aa18.21■□□□□ 0.51
SLC6A8-201ENST00000253122 PFKFB1P16118 471 aa18.21■□□□□ 0.51
SLC6A8-201ENST00000253122 RAD51AP2Q09MP3 1159 aa18.21■□□□□ 0.51
SLC6A8-201ENST00000253122 ARMCX5Q6P1M9 558 aa18.21■□□□□ 0.51
SLC6A8-201ENST00000253122 RUFY1Q96T51 708 aa18.21■□□□□ 0.51
SLC6A8-201ENST00000253122 MPHOSPH8Q99549 860 aa18.21■□□□□ 0.51
SLC6A8-201ENST00000253122 PPP2R2CQ9Y2T4 447 aa18.21■□□□□ 0.51
SLC6A8-201ENST00000253122 KDRP35968 1356 aa18.21■□□□□ 0.51
SLC6A8-201ENST00000253122 WDHD1O75717 1129 aaPredicted RBP18.21■□□□□ 0.51
SLC6A8-201ENST00000253122 CDKL5O76039 1030 aa18.21■□□□□ 0.51
SLC6A8-201ENST00000253122 TRMT44Q8IYL2 757 aaKnown RBP18.21■□□□□ 0.51
SLC6A8-201ENST00000253122 PEAK1Q9H792 1746 aa18.21■□□□□ 0.51
SLC6A8-201ENST00000253122 CHMP4BP1P59074 171 aa18.2■□□□□ 0.5
SLC6A8-201ENST00000253122 IRX3P78415 501 aaPredicted RBP18.2■□□□□ 0.5
SLC6A8-201ENST00000253122 SETQ01105 290 aaPredicted RBP18.2■□□□□ 0.5
SLC6A8-201ENST00000253122 LRRN4CLQ8ND94 238 aa18.2■□□□□ 0.5
SLC6A8-201ENST00000253122 GBP3Q9H0R5 595 aa18.2■□□□□ 0.5
SLC6A8-201ENST00000253122 SLAIN2Q9P270 581 aa18.2■□□□□ 0.5
SLC6A8-201ENST00000253122 PRAMEF22A3QJZ6 481 aa18.2■□□□□ 0.5
SLC6A8-201ENST00000253122 IDH1O75874 414 aaKnown RBP18.2■□□□□ 0.5
SLC6A8-201ENST00000253122 CRACR2AQ9BSW2 395 aa18.2■□□□□ 0.5
SLC6A8-201ENST00000253122 AMOTQ4VCS5 1084 aa18.2■□□□□ 0.5
SLC6A8-201ENST00000253122 MYSM1Q5VVJ2 828 aa18.2■□□□□ 0.5
SLC6A8-201ENST00000253122 GPR161Q8N6U8 529 aaKnown RBP18.2■□□□□ 0.5
SLC6A8-201ENST00000253122 PRDM11Q9NQV5 511 aa18.2■□□□□ 0.5
SLC6A8-201ENST00000253122 METAP2P50579 478 aaKnown RBP eCLIP18.19■□□□□ 0.53e-14■■□□□ 11.6
SLC6A8-201ENST00000253122 ST5P78524 1137 aa18.19■□□□□ 0.5
SLC6A8-201ENST00000253122 NOC3LQ8WTT2 800 aaKnown RBP18.19■□□□□ 0.5
SLC6A8-201ENST00000253122 E7EWF7 191 aa18.19■□□□□ 0.5
SLC6A8-201ENST00000253122 ERICH2A1L162 156 aa18.19■□□□□ 0.5
SLC6A8-201ENST00000253122 IARSP41252 1262 aaKnown RBP18.19■□□□□ 0.5
SLC6A8-201ENST00000253122 AFMP43652 599 aa18.19■□□□□ 0.5
SLC6A8-201ENST00000253122 SMARCC1Q92922 1105 aaPredicted RBP18.19■□□□□ 0.5
SLC6A8-201ENST00000253122 GPHNQ9NQX3 736 aaPredicted RBP18.19■□□□□ 0.5
SLC6A8-201ENST00000253122 DBNLQ9UJU6 430 aaKnown RBP18.19■□□□□ 0.5
SLC6A8-201ENST00000253122 IVLP07476 585 aa18.18■□□□□ 0.5
SLC6A8-201ENST00000253122 CYP2C19P33261 490 aa18.18■□□□□ 0.5
SLC6A8-201ENST00000253122 CHRNA2Q15822 529 aa18.18■□□□□ 0.5
SLC6A8-201ENST00000253122 TRIM22Q8IYM9 498 aa18.18■□□□□ 0.5
SLC6A8-201ENST00000253122 NFE2L3Q9Y4A8 694 aa18.18■□□□□ 0.5
SLC6A8-201ENST00000253122 CTAGE15A4D2H0 777 aa18.18■□□□□ 0.5
SLC6A8-201ENST00000253122 CTAGE8P0CG41 777 aa18.18■□□□□ 0.5
SLC6A8-201ENST00000253122 CTAGE6Q86UF2 777 aa18.18■□□□□ 0.5
SLC6A8-201ENST00000253122 CTAGE4Q8IX94 777 aa18.18■□□□□ 0.5
SLC6A8-201ENST00000253122 NCOA7Q8NI08 942 aa18.18■□□□□ 0.5
SLC6A8-201ENST00000253122 KIF1AQ12756 1690 aa18.18■□□□□ 0.5
SLC6A8-201ENST00000253122 ANKRD65E5RJM6 399 aa18.18■□□□□ 0.5
SLC6A8-201ENST00000253122 PDIA3P30101 505 aaKnown RBP18.18■□□□□ 0.5
SLC6A8-201ENST00000253122 NUP88Q99567 741 aaPredicted RBP18.18■□□□□ 0.5
SLC6A8-201ENST00000253122 SLC26A6Q9BXS9 759 aa18.18■□□□□ 0.5
SLC6A8-201ENST00000253122 PARD6BQ9BYG5 372 aa18.18■□□□□ 0.5
SLC6A8-201ENST00000253122 LMTK3Q96Q04 1460 aa18.18■□□□□ 0.5
SLC6A8-201ENST00000253122 TATP17735 454 aaPredicted RBP18.17■□□□□ 0.5
SLC6A8-201ENST00000253122 BRAPQ7Z569 592 aa18.17■□□□□ 0.5
SLC6A8-201ENST00000253122 PDE11AQ9HCR9 933 aa18.17■□□□□ 0.5
SLC6A8-201ENST00000253122 ZNF827Q17R98 1081 aa18.17■□□□□ 0.5
SLC6A8-201ENST00000253122 CCDC57Q2TAC2 916 aa18.17■□□□□ 0.5
SLC6A8-201ENST00000253122 HDXQ7Z353 690 aa18.17■□□□□ 0.5
SLC6A8-201ENST00000253122 KBTBD3Q8NAB2 608 aa18.17■□□□□ 0.5
SLC6A8-201ENST00000253122 OSBPL5Q9H0X9 879 aaPredicted RBP18.17■□□□□ 0.5
SLC6A8-201ENST00000253122 ATP5JP18859 108 aa18.17■□□□□ 0.5
SLC6A8-201ENST00000253122 AKAP4Q5JQC9 854 aa18.17■□□□□ 0.5
SLC6A8-201ENST00000253122 BRINP3Q76B58 766 aa18.17■□□□□ 0.5
SLC6A8-201ENST00000253122 RABEP2Q9H5N1 569 aa18.17■□□□□ 0.5
SLC6A8-201ENST00000253122 BABAM1Q9NWV8 329 aa18.17■□□□□ 0.5
SLC6A8-201ENST00000253122 ADCY9O60503 1353 aa18.16■□□□□ 0.5
SLC6A8-201ENST00000253122 CLIC6Q96NY7 704 aa18.16■□□□□ 0.5
SLC6A8-201ENST00000253122 GOLGA8AA7E2F4 631 aa18.16■□□□□ 0.5
SLC6A8-201ENST00000253122 TTC31Q49AM3 519 aaPredicted RBP18.16■□□□□ 0.5
SLC6A8-201ENST00000253122 LINC00301Q8NCQ3 95 aa18.16■□□□□ 0.5
SLC6A8-201ENST00000253122 IPO4Q8TEX9 1081 aaKnown RBP18.16■□□□□ 0.5
SLC6A8-201ENST00000253122 CTAGE9A4FU28 777 aa18.16■□□□□ 0.5
SLC6A8-201ENST00000253122 LONRF2Q1L5Z9 754 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms