RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 SSC5DA1L4H1 1573 aa16.2■□□□□ 0.18
APOBEC3A-201ENST00000249116 ECM29Q5VYK3 1845 aa16.2■□□□□ 0.18
APOBEC3A-201ENST00000249116 FKTNO75072 461 aa16.19■□□□□ 0.18
APOBEC3A-201ENST00000249116 SOX10P56693 466 aa16.19■□□□□ 0.18
APOBEC3A-201ENST00000249116 SPDYE2Q495Y8 402 aa16.19■□□□□ 0.18
APOBEC3A-201ENST00000249116 LRRC24Q50LG9 513 aa16.19■□□□□ 0.18
APOBEC3A-201ENST00000249116 FBXO33Q7Z6M2 555 aa16.19■□□□□ 0.18
APOBEC3A-201ENST00000249116 TBC1D22AQ8WUA7 517 aa16.19■□□□□ 0.18
APOBEC3A-201ENST00000249116 SSH1Q8WYL5 1049 aa16.19■□□□□ 0.18
APOBEC3A-201ENST00000249116 TDRD3Q9H7E2 651 aaKnown RBP16.19■□□□□ 0.18
APOBEC3A-201ENST00000249116 ZNF70Q9UC06 446 aaPredicted RBP16.19■□□□□ 0.18
APOBEC3A-201ENST00000249116 PDE8BO95263 885 aa16.19■□□□□ 0.18
APOBEC3A-201ENST00000249116 CRKP46108 304 aa16.19■□□□□ 0.18
APOBEC3A-201ENST00000249116 TNNI2P48788 182 aa16.19■□□□□ 0.18
APOBEC3A-201ENST00000249116 SLFN5Q08AF3 891 aa16.19■□□□□ 0.18
APOBEC3A-201ENST00000249116 ALDH1L2Q3SY69 923 aa16.19■□□□□ 0.18
APOBEC3A-201ENST00000249116 IFNL1Q8IU54 200 aa16.19■□□□□ 0.18
APOBEC3A-201ENST00000249116 DZIP1LQ8IYY4 767 aaKnown RBP16.19■□□□□ 0.18
APOBEC3A-201ENST00000249116 ANKRD13AQ8IZ07 590 aa16.19■□□□□ 0.18
APOBEC3A-201ENST00000249116 CLMNQ96JQ2 1002 aa16.19■□□□□ 0.18
APOBEC3A-201ENST00000249116 HPS5Q9UPZ3 1129 aa16.19■□□□□ 0.18
APOBEC3A-201ENST00000249116 AOX1Q06278 1338 aa16.18■□□□□ 0.18
APOBEC3A-201ENST00000249116 USP2O75604 605 aaPredicted RBP16.18■□□□□ 0.18
APOBEC3A-201ENST00000249116 CHAF1AQ13111 956 aaPredicted RBP16.18■□□□□ 0.18
APOBEC3A-201ENST00000249116 OTUD7BQ6GQQ9 843 aa16.18■□□□□ 0.18
APOBEC3A-201ENST00000249116 USP44Q9H0E7 712 aa16.18■□□□□ 0.18
APOBEC3A-201ENST00000249116 IQSEC3Q9UPP2 1182 aaPredicted RBP16.18■□□□□ 0.18
APOBEC3A-201ENST00000249116 IFIT1P09914 478 aaKnown RBP16.17■□□□□ 0.18
APOBEC3A-201ENST00000249116 HDLBPQ00341 1268 aaKnown RBP16.17■□□□□ 0.18
APOBEC3A-201ENST00000249116 FBXO46Q6PJ61 603 aaPredicted RBP16.17■□□□□ 0.18
APOBEC3A-201ENST00000249116 TCP10L2B9ZVM9 353 aa16.16■□□□□ 0.18
APOBEC3A-201ENST00000249116 VGLL2Q8N8G2 317 aa16.16■□□□□ 0.18
APOBEC3A-201ENST00000249116 KLHDC4Q8TBB5 520 aa16.16■□□□□ 0.18
APOBEC3A-201ENST00000249116 SMC4Q9NTJ3 1288 aa16.16■□□□□ 0.18
APOBEC3A-201ENST00000249116 MAST3O60307 1309 aa16.15■□□□□ 0.18
APOBEC3A-201ENST00000249116 KIF16BQ96L93 1317 aa16.15■□□□□ 0.18
APOBEC3A-201ENST00000249116 PUM3Q15397 648 aaKnown RBP16.15■□□□□ 0.18
APOBEC3A-201ENST00000249116 TEKT1Q969V4 418 aa16.15■□□□□ 0.18
APOBEC3A-201ENST00000249116 R3HDMLQ9H3Y0 253 aa16.15■□□□□ 0.18
APOBEC3A-201ENST00000249116 TMOD2Q9NZR1 351 aa16.15■□□□□ 0.18
APOBEC3A-201ENST00000249116 ARAP2Q8WZ64 1704 aa16.15■□□□□ 0.18
APOBEC3A-201ENST00000249116 IGF2BP3O00425 579 aaKnown RBP eCLIP16.14■□□□□ 0.17
APOBEC3A-201ENST00000249116 BCAMP50895 628 aa16.14■□□□□ 0.17
APOBEC3A-201ENST00000249116 SUGT1Q9Y2Z0 365 aa16.14■□□□□ 0.17
APOBEC3A-201ENST00000249116 EYA2O00167 538 aa16.13■□□□□ 0.17
APOBEC3A-201ENST00000249116 CT47B1P0C2W7 299 aaPredicted RBP16.13■□□□□ 0.17
APOBEC3A-201ENST00000249116 SLC5A1P13866 664 aa16.13■□□□□ 0.17
APOBEC3A-201ENST00000249116 OPTNQ96CV9 577 aa16.13■□□□□ 0.17
APOBEC3A-201ENST00000249116 TEPSINQ96N21 525 aa16.13■□□□□ 0.17
APOBEC3A-201ENST00000249116 MRIQ9BWK5 157 aa16.13■□□□□ 0.17
APOBEC3A-201ENST00000249116 TMEM39BQ9GZU3 492 aa16.13■□□□□ 0.17
APOBEC3A-201ENST00000249116 ELP3Q9H9T3 547 aa16.13■□□□□ 0.17
APOBEC3A-201ENST00000249116 UBTFL1P0CB47 393 aaPredicted RBP16.12■□□□□ 0.17
APOBEC3A-201ENST00000249116 FGFR2P21802 821 aa16.12■□□□□ 0.17
APOBEC3A-201ENST00000249116 GJA5P36382 358 aa16.12■□□□□ 0.17
APOBEC3A-201ENST00000249116 GRIK5Q16478 980 aa16.12■□□□□ 0.17
APOBEC3A-201ENST00000249116 LPIN2Q92539 896 aa16.12■□□□□ 0.17
APOBEC3A-201ENST00000249116 HOOK2Q96ED9 719 aa16.12■□□□□ 0.17
APOBEC3A-201ENST00000249116 CDCA7LQ96GN5 454 aa16.12■□□□□ 0.17
APOBEC3A-201ENST00000249116 ZDHHC15Q96MV8 337 aa16.12■□□□□ 0.17
APOBEC3A-201ENST00000249116 HDAC5Q9UQL6 1122 aa16.12■□□□□ 0.17
APOBEC3A-201ENST00000249116 CSADQ9Y600 493 aa16.12■□□□□ 0.17
APOBEC3A-201ENST00000249116 TESPA1A2RU30 521 aaPredicted RBP16.11■□□□□ 0.17
APOBEC3A-201ENST00000249116 RFX5P48382 616 aaPredicted RBP16.11■□□□□ 0.17
APOBEC3A-201ENST00000249116 MAP3K9P80192 1104 aa16.11■□□□□ 0.17
APOBEC3A-201ENST00000249116 WDR66Q8TBY9 1149 aa16.11■□□□□ 0.17
APOBEC3A-201ENST00000249116 ERO1AQ96HE7 468 aa16.11■□□□□ 0.17
APOBEC3A-201ENST00000249116 FBXO3Q9UK99 471 aa16.11■□□□□ 0.17
APOBEC3A-201ENST00000249116 TRIM17Q9Y577 477 aa16.11■□□□□ 0.17
APOBEC3A-201ENST00000249116 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.11■□□□□ 0.17
APOBEC3A-201ENST00000249116 CDAN1Q8IWY9 1227 aa16.11■□□□□ 0.17
APOBEC3A-201ENST00000249116 API5Q9BZZ5 524 aaKnown RBP16.11■□□□□ 0.17
APOBEC3A-201ENST00000249116 GTF2A2P52657 109 aa16.1■□□□□ 0.17
APOBEC3A-201ENST00000249116 CACNB3P54284 484 aa16.1■□□□□ 0.17
APOBEC3A-201ENST00000249116 CRHR2Q13324 411 aa16.1■□□□□ 0.17
APOBEC3A-201ENST00000249116 VGLL4Q14135 290 aa16.1■□□□□ 0.17
APOBEC3A-201ENST00000249116 FKBP1CQ5VVH2 108 aa16.1■□□□□ 0.17
APOBEC3A-201ENST00000249116 HHIPL2Q6UWX4 724 aa16.1■□□□□ 0.17
APOBEC3A-201ENST00000249116 FAM83AQ86UY5 434 aa16.1■□□□□ 0.17
APOBEC3A-201ENST00000249116 TRMT2AQ8IZ69 625 aaKnown RBP16.1■□□□□ 0.17
APOBEC3A-201ENST00000249116 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.1■□□□□ 0.17
APOBEC3A-201ENST00000249116 LAMB1P07942 1786 aa16.09■□□□□ 0.17
APOBEC3A-201ENST00000249116 OTOP1Q7RTM1 612 aa16.09■□□□□ 0.17
APOBEC3A-201ENST00000249116 ATG9AQ7Z3C6 839 aa16.09■□□□□ 0.17
APOBEC3A-201ENST00000249116 PTPN18Q99952 460 aa16.09■□□□□ 0.17
APOBEC3A-201ENST00000249116 GNL3LQ9NVN8 582 aaKnown RBP16.09■□□□□ 0.17
APOBEC3A-201ENST00000249116 CEP126Q9P2H0 1117 aa16.09■□□□□ 0.17
APOBEC3A-201ENST00000249116 NOB1Q9ULX3 412 aaKnown RBP16.09■□□□□ 0.17
APOBEC3A-201ENST00000249116 CIAO1O76071 339 aa16.08■□□□□ 0.16
APOBEC3A-201ENST00000249116 SP3Q02447 781 aa16.08■□□□□ 0.16
APOBEC3A-201ENST00000249116 DCAF15Q66K64 600 aa16.08■□□□□ 0.16
APOBEC3A-201ENST00000249116 APOBEC3HQ6NTF7 200 aaKnown RBP16.08■□□□□ 0.16
APOBEC3A-201ENST00000249116 MS4A4AQ96JQ5 239 aa16.08■□□□□ 0.16
APOBEC3A-201ENST00000249116 SIL1Q9H173 461 aa16.08■□□□□ 0.16
APOBEC3A-201ENST00000249116 CCL15-CCL14A0A0B4J2E2 113 aa16.07■□□□□ 0.16
APOBEC3A-201ENST00000249116 WDHD1O75717 1129 aaPredicted RBP16.07■□□□□ 0.16
APOBEC3A-201ENST00000249116 ATXN8OSP0DMR3 200 aa16.07■□□□□ 0.16
APOBEC3A-201ENST00000249116 CCL15Q16663 113 aa16.07■□□□□ 0.16
APOBEC3A-201ENST00000249116 ATP2B3Q16720 1220 aa16.07■□□□□ 0.16
APOBEC3A-201ENST00000249116 CD99L2Q8TCZ2 262 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms