RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 BCL2L12Q9HB09 334 aa29.79■■■□□ 2.36
RAB40C-201ENST00000248139 A0A0G2JS52 829 aa29.79■■■□□ 2.36
RAB40C-201ENST00000248139 MARCKSP29966 332 aaPredicted RBP29.79■■■□□ 2.36
RAB40C-201ENST00000248139 ADD2P35612 726 aa29.79■■■□□ 2.36
RAB40C-201ENST00000248139 PHKBQ93100 1093 aa29.79■■■□□ 2.36
RAB40C-201ENST00000248139 BTG4Q9NY30 223 aa29.79■■■□□ 2.36
RAB40C-201ENST00000248139 ZNF335Q9H4Z2 1342 aaPredicted RBP29.79■■■□□ 2.36
RAB40C-201ENST00000248139 CTSWP56202 376 aa29.79■■■□□ 2.36
RAB40C-201ENST00000248139 STK11IPQ8N1F8 1099 aa29.79■■■□□ 2.36
RAB40C-201ENST00000248139 PLA2G12BQ9BX93 195 aa29.79■■■□□ 2.36
RAB40C-201ENST00000248139 ANKRD18BA2A2Z9 1011 aa29.78■■■□□ 2.36
RAB40C-201ENST00000248139 B4E1Z4 1266 aa29.78■■■□□ 2.36
RAB40C-201ENST00000248139 CTAGE5O15320 804 aa29.78■■■□□ 2.36
RAB40C-201ENST00000248139 PAPPAQ13219 1627 aa29.78■■■□□ 2.36
RAB40C-201ENST00000248139 ZNF532Q9HCE3 1301 aa29.78■■■□□ 2.36
RAB40C-201ENST00000248139 MYSM1Q5VVJ2 828 aa29.78■■■□□ 2.36
RAB40C-201ENST00000248139 ADALQ6DHV7 355 aa29.77■■■□□ 2.36
RAB40C-201ENST00000248139 MYO5AQ9Y4I1 1855 aaKnown RBP29.77■■■□□ 2.36
RAB40C-201ENST00000248139 XIRP1Q702N8 1843 aaKnown RBP29.77■■■□□ 2.36
RAB40C-201ENST00000248139 DPCR1Q3MIW9 517 aa29.77■■■□□ 2.36
RAB40C-201ENST00000248139 CCDC102BQ68D86 513 aa29.76■■■□□ 2.35
RAB40C-201ENST00000248139 ARHGAP30Q7Z6I6 1101 aaPredicted RBP29.76■■■□□ 2.35
RAB40C-201ENST00000248139 MICU3Q86XE3 530 aa29.76■■■□□ 2.35
RAB40C-201ENST00000248139 SPTLC2O15270 562 aa29.76■■■□□ 2.35
RAB40C-201ENST00000248139 GTF2F1P35269 517 aaKnown RBP eCLIP29.76■■■□□ 2.354e-9■■■■■ 33
RAB40C-201ENST00000248139 CHAF1AQ13111 956 aaPredicted RBP29.76■■■□□ 2.35
RAB40C-201ENST00000248139 ANO10Q9NW15 660 aa29.76■■■□□ 2.35
RAB40C-201ENST00000248139 USP27XA6NNY8 438 aa29.75■■■□□ 2.35
RAB40C-201ENST00000248139 FBXL16Q8N461 479 aa29.75■■■□□ 2.35
RAB40C-201ENST00000248139 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.75■■■□□ 2.35
RAB40C-201ENST00000248139 FBXO3Q9UK99 471 aa29.75■■■□□ 2.35
RAB40C-201ENST00000248139 CDC27P30260 824 aa29.75■■■□□ 2.35
RAB40C-201ENST00000248139 ATL3Q6DD88 541 aa29.75■■■□□ 2.35
RAB40C-201ENST00000248139 VGLL2Q8N8G2 317 aa29.75■■■□□ 2.35
RAB40C-201ENST00000248139 MAP7D2Q96T17 732 aa29.75■■■□□ 2.35
RAB40C-201ENST00000248139 TRDNQ13061 729 aa29.74■■■□□ 2.35
RAB40C-201ENST00000248139 DHX16O60231 1041 aaKnown RBP29.74■■■□□ 2.35
RAB40C-201ENST00000248139 KIF23Q02241 960 aaPredicted RBP29.74■■■□□ 2.35
RAB40C-201ENST00000248139 SYNE3Q6ZMZ3 975 aa29.74■■■□□ 2.35
RAB40C-201ENST00000248139 LRRC8AQ8IWT6 810 aa29.74■■■□□ 2.35
RAB40C-201ENST00000248139 SPEF2Q9C093 1822 aa29.74■■■□□ 2.35
RAB40C-201ENST00000248139 PDE8BO95263 885 aa29.73■■■□□ 2.35
RAB40C-201ENST00000248139 CYP19A1P11511 503 aaPredicted RBP29.73■■■□□ 2.35
RAB40C-201ENST00000248139 TICAM2Q86XR7 235 aa29.73■■■□□ 2.35
RAB40C-201ENST00000248139 WDHD1O75717 1129 aaPredicted RBP29.73■■■□□ 2.35
RAB40C-201ENST00000248139 TNNT1P13805 278 aa29.73■■■□□ 2.35
RAB40C-201ENST00000248139 TPD52L1Q16890 204 aaPredicted RBP29.73■■■□□ 2.35
RAB40C-201ENST00000248139 PDE6AP16499 860 aa29.72■■■□□ 2.35
RAB40C-201ENST00000248139 CEP57L1Q8IYX8 460 aa29.72■■■□□ 2.35
RAB40C-201ENST00000248139 ZNF592Q92610 1267 aa29.72■■■□□ 2.35
RAB40C-201ENST00000248139 AKAP11Q9UKA4 1901 aa29.72■■■□□ 2.35
RAB40C-201ENST00000248139 ALG1Q9BT22 464 aa29.72■■■□□ 2.35
RAB40C-201ENST00000248139 TEX13AQ9BXU3 409 aaPredicted RBP29.72■■■□□ 2.35
RAB40C-201ENST00000248139 NEDD4P46934 1319 aa29.72■■■□□ 2.35
RAB40C-201ENST00000248139 UBN2Q6ZU65 1347 aa29.72■■■□□ 2.35
RAB40C-201ENST00000248139 CAVIN2O95810 425 aa29.71■■■□□ 2.35
RAB40C-201ENST00000248139 METAP2P50579 478 aaKnown RBP eCLIP29.71■■■□□ 2.35
RAB40C-201ENST00000248139 CTDSPL2Q05D32 466 aa29.71■■■□□ 2.35
RAB40C-201ENST00000248139 SARM1Q6SZW1 724 aa29.71■■■□□ 2.35
RAB40C-201ENST00000248139 ANGEL1Q9UNK9 670 aaKnown RBP29.71■■■□□ 2.35
RAB40C-201ENST00000248139 KIAA1468Q9P260 1216 aa29.71■■■□□ 2.35
RAB40C-201ENST00000248139 NAA30Q147X3 362 aaPredicted RBP29.7■■■□□ 2.35
RAB40C-201ENST00000248139 ANO1Q5XXA6 986 aa29.7■■■□□ 2.35
RAB40C-201ENST00000248139 MROH7-TTC4A0A0A0MT08 1334 aa29.7■■■□□ 2.35
RAB40C-201ENST00000248139 ZNF202O95125 648 aa29.7■■■□□ 2.34
RAB40C-201ENST00000248139 ZMYND15Q9H091 742 aa29.7■■■□□ 2.34
RAB40C-201ENST00000248139 POLR3EQ9NVU0 708 aa29.7■■■□□ 2.34
RAB40C-201ENST00000248139 TRMT1Q9NXH9 659 aaKnown RBP29.7■■■□□ 2.34
RAB40C-201ENST00000248139 KCNG4Q8TDN1 519 aa29.69■■■□□ 2.34
RAB40C-201ENST00000248139 DZIP3Q86Y13 1208 aaKnown RBP29.69■■■□□ 2.34
RAB40C-201ENST00000248139 MRFAP1L1Q96HT8 127 aa29.69■■■□□ 2.34
RAB40C-201ENST00000248139 TACC3Q9Y6A5 838 aa29.69■■■□□ 2.34
RAB40C-201ENST00000248139 AXDND1Q5T1B0 1012 aaPredicted RBP29.68■■■□□ 2.34
RAB40C-201ENST00000248139 NFXL1Q6ZNB6 911 aa29.68■■■□□ 2.34
RAB40C-201ENST00000248139 CDHR2Q9BYE9 1310 aa29.68■■■□□ 2.34
RAB40C-201ENST00000248139 A0A1W2PQ27 194 aa29.68■■■□□ 2.34
RAB40C-201ENST00000248139 A0A1W2PQ64 194 aa29.68■■■□□ 2.34
RAB40C-201ENST00000248139 A0A1W2PQD8 194 aa29.68■■■□□ 2.34
RAB40C-201ENST00000248139 CCDC69A6NI79 296 aa29.68■■■□□ 2.34
RAB40C-201ENST00000248139 SH2B2O14492 632 aaPredicted RBP29.68■■■□□ 2.34
RAB40C-201ENST00000248139 PFKFB1P16118 471 aa29.68■■■□□ 2.34
RAB40C-201ENST00000248139 APOA5Q6Q788 366 aa29.68■■■□□ 2.34
RAB40C-201ENST00000248139 AIDAQ96BJ3 306 aa29.68■■■□□ 2.34
RAB40C-201ENST00000248139 SEC31BQ9NQW1 1179 aa29.68■■■□□ 2.34
RAB40C-201ENST00000248139 SKILP12757 684 aa29.68■■■□□ 2.34
RAB40C-201ENST00000248139 VPS37DQ86XT2 251 aa29.68■■■□□ 2.34
RAB40C-201ENST00000248139 CDC25BP30305 580 aa29.67■■■□□ 2.34
RAB40C-201ENST00000248139 KRT40Q6A162 431 aa29.67■■■□□ 2.34
RAB40C-201ENST00000248139 CCDC82Q8N4S0 544 aa29.67■■■□□ 2.34
RAB40C-201ENST00000248139 MAGEB6Q8N7X4 407 aa29.67■■■□□ 2.34
RAB40C-201ENST00000248139 ZKSCAN3Q9BRR0 538 aa29.67■■■□□ 2.34
RAB40C-201ENST00000248139 ARMT1Q9H993 441 aa29.67■■■□□ 2.34
RAB40C-201ENST00000248139 PRKAB2O43741 272 aa29.67■■■□□ 2.34
RAB40C-201ENST00000248139 YEATS4O95619 227 aa29.67■■■□□ 2.34
RAB40C-201ENST00000248139 CLIC6Q96NY7 704 aa29.67■■■□□ 2.34
RAB40C-201ENST00000248139 STRBPQ96SI9 672 aaKnown RBP29.67■■■□□ 2.34
RAB40C-201ENST00000248139 TCRBV5S4A2TA0A5A2 114 aa29.66■■■□□ 2.34
RAB40C-201ENST00000248139 SLC3A2P08195 630 aaKnown RBP29.66■■■□□ 2.34
RAB40C-201ENST00000248139 ZRSR1Q15695 479 aaKnown RBP29.66■■■□□ 2.34
RAB40C-201ENST00000248139 BRAPQ7Z569 592 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms