RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 PHKA1P46020 1223 aa26.2■■□□□ 1.78
HCFC1R1-201ENST00000248089 TFCP2Q12800 502 aa26.2■■□□□ 1.78
HCFC1R1-201ENST00000248089 TDRD3Q9H7E2 651 aaKnown RBP26.2■■□□□ 1.78
HCFC1R1-201ENST00000248089 AKAP11Q9UKA4 1901 aa26.2■■□□□ 1.78
HCFC1R1-201ENST00000248089 SPDYE2Q495Y8 402 aa26.19■■□□□ 1.78
HCFC1R1-201ENST00000248089 RASAL3Q86YV0 1011 aa26.19■■□□□ 1.78
HCFC1R1-201ENST00000248089 TNS4Q8IZW8 715 aa26.19■■□□□ 1.78
HCFC1R1-201ENST00000248089 TEKT1Q969V4 418 aa26.19■■□□□ 1.78
HCFC1R1-201ENST00000248089 ZNF70Q9UC06 446 aaPredicted RBP26.19■■□□□ 1.78
HCFC1R1-201ENST00000248089 TSKSQ9UJT2 592 aa26.19■■□□□ 1.78
HCFC1R1-201ENST00000248089 PPP2R3BQ9Y5P8 575 aa26.19■■□□□ 1.78
HCFC1R1-201ENST00000248089 MAST3O60307 1309 aa26.18■■□□□ 1.78
HCFC1R1-201ENST00000248089 IFFO2Q5TF58 517 aa26.18■■□□□ 1.78
HCFC1R1-201ENST00000248089 WDR66Q8TBY9 1149 aa26.18■■□□□ 1.78
HCFC1R1-201ENST00000248089 PANK1Q8TE04 598 aa26.18■■□□□ 1.78
HCFC1R1-201ENST00000248089 SSC5DA1L4H1 1573 aa26.17■■□□□ 1.78
HCFC1R1-201ENST00000248089 A0A1B0GUL7 405 aa26.17■■□□□ 1.78
HCFC1R1-201ENST00000248089 TIMM10P62072 90 aa26.17■■□□□ 1.78
HCFC1R1-201ENST00000248089 ARMC9Q7Z3E5 817 aa26.17■■□□□ 1.78
HCFC1R1-201ENST00000248089 PRDM10Q9NQV6 1147 aa26.17■■□□□ 1.78
HCFC1R1-201ENST00000248089 FZD1Q9UP38 647 aa26.17■■□□□ 1.78
HCFC1R1-201ENST00000248089 AKAP2Q9Y2D5 859 aa26.17■■□□□ 1.78
HCFC1R1-201ENST00000248089 HDLBPQ00341 1268 aaKnown RBP26.16■■□□□ 1.78
HCFC1R1-201ENST00000248089 KIF23Q02241 960 aaPredicted RBP26.16■■□□□ 1.78
HCFC1R1-201ENST00000248089 G3BP1Q13283 466 aaKnown RBP eCLIP26.16■■□□□ 1.78
HCFC1R1-201ENST00000248089 TNFAIP1Q13829 316 aa26.16■■□□□ 1.78
HCFC1R1-201ENST00000248089 RASA3Q14644 834 aa26.16■■□□□ 1.78
HCFC1R1-201ENST00000248089 CCDC102BQ68D86 513 aa26.16■■□□□ 1.78
HCFC1R1-201ENST00000248089 ANGEL1Q9UNK9 670 aaKnown RBP26.16■■□□□ 1.78
HCFC1R1-201ENST00000248089 SUGT1Q9Y2Z0 365 aa26.16■■□□□ 1.78
HCFC1R1-201ENST00000248089 NEUROD6Q96NK8 337 aa26.15■■□□□ 1.78
HCFC1R1-201ENST00000248089 DENND2AQ9ULE3 1009 aa26.15■■□□□ 1.78
HCFC1R1-201ENST00000248089 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.15■■□□□ 1.78
HCFC1R1-201ENST00000248089 TCP10L2B9ZVM9 353 aa26.14■■□□□ 1.78
HCFC1R1-201ENST00000248089 ZBTB7BO15156 539 aaPredicted RBP26.14■■□□□ 1.78
HCFC1R1-201ENST00000248089 XAGE2Q96GT9 111 aa26.14■■□□□ 1.78
HCFC1R1-201ENST00000248089 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.14■■□□□ 1.78
HCFC1R1-201ENST00000248089 OTOFQ9HC10 1997 aa26.14■■□□□ 1.77
HCFC1R1-201ENST00000248089 SEMA3EO15041 775 aa26.13■■□□□ 1.77
HCFC1R1-201ENST00000248089 OS9Q13438 667 aaPredicted RBP26.13■■□□□ 1.77
HCFC1R1-201ENST00000248089 NBPF12Q5TAG4 269 aaPredicted RBP26.13■■□□□ 1.77
HCFC1R1-201ENST00000248089 MYH2Q9UKX2 1941 aa26.13■■□□□ 1.77
HCFC1R1-201ENST00000248089 CA12O43570 354 aa26.12■■□□□ 1.77
HCFC1R1-201ENST00000248089 PRDX5P30044 214 aa26.12■■□□□ 1.77
HCFC1R1-201ENST00000248089 ATP8B2P98198 1209 aa26.12■■□□□ 1.77
HCFC1R1-201ENST00000248089 POLA2Q14181 598 aa26.12■■□□□ 1.77
HCFC1R1-201ENST00000248089 MVPQ14764 893 aaKnown RBP26.12■■□□□ 1.77
HCFC1R1-201ENST00000248089 SUPT20HL1Q3ZLR7 823 aa26.12■■□□□ 1.77
HCFC1R1-201ENST00000248089 ZDHHC15Q96MV8 337 aa26.12■■□□□ 1.77
HCFC1R1-201ENST00000248089 RCAN3Q9UKA8 241 aa26.12■■□□□ 1.77
HCFC1R1-201ENST00000248089 PPP1R12BO60237 982 aaPredicted RBP26.11■■□□□ 1.77
HCFC1R1-201ENST00000248089 LDHBP07195 334 aaKnown RBP26.11■■□□□ 1.77
HCFC1R1-201ENST00000248089 MS4A1P11836 297 aa26.11■■□□□ 1.77
HCFC1R1-201ENST00000248089 TNNI2P48788 182 aa26.11■■□□□ 1.77
HCFC1R1-201ENST00000248089 CACNB3P54284 484 aa26.11■■□□□ 1.77
HCFC1R1-201ENST00000248089 MKRN3Q13064 507 aaKnown RBP26.11■■□□□ 1.77
HCFC1R1-201ENST00000248089 RASGRF1Q13972 1273 aa26.11■■□□□ 1.77
HCFC1R1-201ENST00000248089 GORABQ5T7V8 394 aa26.11■■□□□ 1.77
HCFC1R1-201ENST00000248089 SSH3Q8TE77 659 aa26.11■■□□□ 1.77
HCFC1R1-201ENST00000248089 TMOD2Q9NZR1 351 aa26.11■■□□□ 1.77
HCFC1R1-201ENST00000248089 DIXDC1Q155Q3 683 aa26.1■■□□□ 1.77
HCFC1R1-201ENST00000248089 HHIPL2Q6UWX4 724 aa26.1■■□□□ 1.77
HCFC1R1-201ENST00000248089 CASP8AP2Q9UKL3 1982 aa26.09■■□□□ 1.77
HCFC1R1-201ENST00000248089 SURF6O75683 361 aaKnown RBP26.09■■□□□ 1.77
HCFC1R1-201ENST00000248089 MRIQ9BWK5 157 aa26.09■■□□□ 1.77
HCFC1R1-201ENST00000248089 TMEM39BQ9GZU3 492 aa26.09■■□□□ 1.77
HCFC1R1-201ENST00000248089 SALL1Q9NSC2 1324 aa26.09■■□□□ 1.77
HCFC1R1-201ENST00000248089 AK9Q5TCS8 1911 aa26.08■■□□□ 1.77
HCFC1R1-201ENST00000248089 APOBEC3HQ6NTF7 200 aaKnown RBP26.08■■□□□ 1.77
HCFC1R1-201ENST00000248089 CDAN1Q8IWY9 1227 aa26.08■■□□□ 1.77
HCFC1R1-201ENST00000248089 CSRNP1Q96S65 589 aa26.08■■□□□ 1.77
HCFC1R1-201ENST00000248089 LDLRAD1Q5T700 205 aa26.07■■□□□ 1.76
HCFC1R1-201ENST00000248089 CEP85Q6P2H3 762 aa26.07■■□□□ 1.76
HCFC1R1-201ENST00000248089 ZGPATQ8N5A5 531 aaKnown RBP26.07■■□□□ 1.76
HCFC1R1-201ENST00000248089 ABCF2Q9UG63 623 aa26.07■■□□□ 1.76
HCFC1R1-201ENST00000248089 DAGLAQ9Y4D2 1042 aa26.07■■□□□ 1.76
HCFC1R1-201ENST00000248089 IREB2P48200 963 aaKnown RBP26.06■■□□□ 1.76
HCFC1R1-201ENST00000248089 CLMNQ96JQ2 1002 aa26.06■■□□□ 1.76
HCFC1R1-201ENST00000248089 COG6Q9Y2V7 657 aa26.06■■□□□ 1.76
HCFC1R1-201ENST00000248089 MAP3K11Q16584 847 aa26.05■■□□□ 1.76
HCFC1R1-201ENST00000248089 DZIP1Q86YF9 867 aaKnown RBP26.05■■□□□ 1.76
HCFC1R1-201ENST00000248089 TEPSINQ96N21 525 aa26.05■■□□□ 1.76
HCFC1R1-201ENST00000248089 PDS5AQ29RF7 1337 aaKnown RBP26.05■■□□□ 1.76
HCFC1R1-201ENST00000248089 TRPA1O75762 1119 aa26.04■■□□□ 1.76
HCFC1R1-201ENST00000248089 CAPN15O75808 1086 aa26.04■■□□□ 1.76
HCFC1R1-201ENST00000248089 REM2Q8IYK8 340 aaPredicted RBP26.04■■□□□ 1.76
HCFC1R1-201ENST00000248089 SLC10A4Q96EP9 437 aa26.04■■□□□ 1.76
HCFC1R1-201ENST00000248089 RNF186Q9NXI6 227 aa26.04■■□□□ 1.76
HCFC1R1-201ENST00000248089 ZBTB22O15209 634 aa26.03■■□□□ 1.76
HCFC1R1-201ENST00000248089 USP2O75604 605 aaPredicted RBP26.03■■□□□ 1.76
HCFC1R1-201ENST00000248089 TNNI3KQ59H18 835 aa26.03■■□□□ 1.76
HCFC1R1-201ENST00000248089 PI16Q6UXB8 463 aa26.03■■□□□ 1.76
HCFC1R1-201ENST00000248089 SAGE1Q9NXZ1 904 aa26.03■■□□□ 1.76
HCFC1R1-201ENST00000248089 FPGT-TNNI3KV9GXZ4 949 aa26.03■■□□□ 1.76
HCFC1R1-201ENST00000248089 LAMB1P07942 1786 aa26.02■■□□□ 1.76
HCFC1R1-201ENST00000248089 HMG20BQ9P0W2 317 aa26.02■■□□□ 1.76
HCFC1R1-201ENST00000248089 DDX19BQ9UMR2 479 aa26.02■■□□□ 1.76
HCFC1R1-201ENST00000248089 ARID4AP29374 1257 aaPredicted RBP26.01■■□□□ 1.75
HCFC1R1-201ENST00000248089 SPRYD7Q5W111 196 aa26.01■■□□□ 1.75
HCFC1R1-201ENST00000248089 SPTY2D1Q68D10 685 aaPredicted RBP26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms