RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 CALCOCO1Q9P1Z2 691 aa8.27□□□□□ -1.08
SSR1-201ENST00000244763 GJA3Q9Y6H8 435 aa8.27□□□□□ -1.08
SSR1-201ENST00000244763 FAM169AQ9Y6X4 670 aa8.27□□□□□ -1.08
SSR1-201ENST00000244763 CTAGE9A4FU28 777 aa8.27□□□□□ -1.09
SSR1-201ENST00000244763 RIMBP2O15034 1052 aa8.27□□□□□ -1.09
SSR1-201ENST00000244763 ARL1P40616 181 aaPredicted RBP8.27□□□□□ -1.09
SSR1-201ENST00000244763 RBM10P98175 930 aaKnown RBP8.27□□□□□ -1.09
SSR1-201ENST00000244763 STRN3Q13033 797 aa8.27□□□□□ -1.09
SSR1-201ENST00000244763 TBC1D32Q96NH3 1257 aa8.27□□□□□ -1.09
SSR1-201ENST00000244763 CCDC94Q9BW85 323 aaPredicted RBP8.27□□□□□ -1.09
SSR1-201ENST00000244763 LPXNO60711 386 aa8.27□□□□□ -1.09
SSR1-201ENST00000244763 PSMD1Q99460 953 aa8.27□□□□□ -1.09
SSR1-201ENST00000244763 HMGB1P1B2RPK0 211 aaPredicted RBP8.27□□□□□ -1.09
SSR1-201ENST00000244763 M0QZ92 97 aa8.27□□□□□ -1.09
SSR1-201ENST00000244763 RRP9O43818 475 aaKnown RBP8.27□□□□□ -1.09
SSR1-201ENST00000244763 DNM2P50570 870 aa8.27□□□□□ -1.09
SSR1-201ENST00000244763 PABPC4Q13310 644 aaKnown RBP eCLIP8.27□□□□□ -1.099e-13■■□□□ 14
SSR1-201ENST00000244763 MAP7D1Q3KQU3 841 aa8.27□□□□□ -1.09
SSR1-201ENST00000244763 INTS4Q96HW7 963 aaKnown RBP8.27□□□□□ -1.09
SSR1-201ENST00000244763 LLPHQ9BRT6 129 aaKnown RBP8.27□□□□□ -1.09
SSR1-201ENST00000244763 POLKQ9UBT6 870 aa8.27□□□□□ -1.09
SSR1-201ENST00000244763 NOP56O00567 594 aaKnown RBP8.27□□□□□ -1.09
SSR1-201ENST00000244763 TNFAIP1Q13829 316 aa8.27□□□□□ -1.09
SSR1-201ENST00000244763 GIMAP7Q8NHV1 300 aa8.27□□□□□ -1.09
SSR1-201ENST00000244763 TRMT1Q9NXH9 659 aaKnown RBP8.27□□□□□ -1.09
SSR1-201ENST00000244763 ALDH3A1P30838 453 aa8.27□□□□□ -1.09
SSR1-201ENST00000244763 CCDC184Q52MB2 194 aa8.27□□□□□ -1.09
SSR1-201ENST00000244763 DPP8Q6V1X1 898 aaPredicted RBP8.27□□□□□ -1.09
SSR1-201ENST00000244763 MPNDQ8N594 471 aa8.27□□□□□ -1.09
SSR1-201ENST00000244763 PRIMPOLQ96LW4 560 aa8.27□□□□□ -1.09
SSR1-201ENST00000244763 NOX5Q96PH1 765 aa8.27□□□□□ -1.09
SSR1-201ENST00000244763 MTRF1LQ9UGC7 380 aaKnown RBP8.27□□□□□ -1.09
SSR1-201ENST00000244763 DPY19L2Q6NUT2 758 aa8.27□□□□□ -1.09
SSR1-201ENST00000244763 SYCP2Q9BX26 1530 aa8.27□□□□□ -1.09
SSR1-201ENST00000244763 BICRAQ9NZM4 1560 aa8.27□□□□□ -1.09
SSR1-201ENST00000244763 CTAGE15A4D2H0 777 aa8.27□□□□□ -1.09
SSR1-201ENST00000244763 CTAGE8P0CG41 777 aa8.27□□□□□ -1.09
SSR1-201ENST00000244763 CTAGE6Q86UF2 777 aa8.27□□□□□ -1.09
SSR1-201ENST00000244763 CTAGE4Q8IX94 777 aa8.27□□□□□ -1.09
SSR1-201ENST00000244763 SNX21Q969T3 373 aa8.27□□□□□ -1.09
SSR1-201ENST00000244763 TRIM6Q9C030 488 aaPredicted RBP8.27□□□□□ -1.09
SSR1-201ENST00000244763 RTEL1Q9NZ71 1219 aa8.27□□□□□ -1.09
SSR1-201ENST00000244763 RILPL1Q5EBL4 403 aa8.26□□□□□ -1.09
SSR1-201ENST00000244763 DCTPP1Q9H773 170 aa8.26□□□□□ -1.09
SSR1-201ENST00000244763 CALUO43852 315 aaPredicted RBP8.26□□□□□ -1.09
SSR1-201ENST00000244763 MTHFSDQ2M296 383 aaKnown RBP8.26□□□□□ -1.09
SSR1-201ENST00000244763 CNNM4Q6P4Q7 775 aa8.26□□□□□ -1.09
SSR1-201ENST00000244763 ZNF790Q6PG37 636 aa8.26□□□□□ -1.09
SSR1-201ENST00000244763 ATP6V0A2Q9Y487 856 aa8.26□□□□□ -1.09
SSR1-201ENST00000244763 DEXIO95424 95 aa8.26□□□□□ -1.09
SSR1-201ENST00000244763 ANXA1P04083 346 aa8.26□□□□□ -1.09
SSR1-201ENST00000244763 EEF2P13639 858 aaKnown RBP8.26□□□□□ -1.09
SSR1-201ENST00000244763 CLUL1Q15846 466 aa8.26□□□□□ -1.09
SSR1-201ENST00000244763 ISM2Q6H9L7 571 aa8.26□□□□□ -1.09
SSR1-201ENST00000244763 FBF1Q8TES7 1133 aa8.26□□□□□ -1.09
SSR1-201ENST00000244763 IQSEC3Q9UPP2 1182 aaPredicted RBP8.26□□□□□ -1.09
SSR1-201ENST00000244763 ZBTB24O43167 697 aaPredicted RBP8.26□□□□□ -1.09
SSR1-201ENST00000244763 KCNA6P17658 529 aa8.26□□□□□ -1.09
SSR1-201ENST00000244763 PLCB3Q01970 1234 aa8.26□□□□□ -1.09
SSR1-201ENST00000244763 RAB3GAP1Q15042 981 aa8.26□□□□□ -1.09
SSR1-201ENST00000244763 UGGT2Q9NYU1 1516 aa8.26□□□□□ -1.09
SSR1-201ENST00000244763 ARFGAP3Q9NP61 516 aa8.26□□□□□ -1.09
SSR1-201ENST00000244763 TRIM14Q14142 442 aa8.26□□□□□ -1.09
SSR1-201ENST00000244763 HOXC9P31274 260 aa8.26□□□□□ -1.09
SSR1-201ENST00000244763 ANKS4BQ8N8V4 417 aa8.26□□□□□ -1.09
SSR1-201ENST00000244763 APPBP2Q92624 585 aa8.26□□□□□ -1.09
SSR1-201ENST00000244763 DHX58Q96C10 678 aa8.26□□□□□ -1.09
SSR1-201ENST00000244763 METTL22Q9BUU2 404 aaPredicted RBP8.26□□□□□ -1.09
SSR1-201ENST00000244763 DISP3Q9P2K9 1392 aa8.26□□□□□ -1.09
SSR1-201ENST00000244763 RUFY3Q7L099 469 aa8.25□□□□□ -1.09
SSR1-201ENST00000244763 ARFGAP2Q8N6H7 521 aa8.25□□□□□ -1.09
SSR1-201ENST00000244763 PKNOX2Q96KN3 472 aa8.25□□□□□ -1.09
SSR1-201ENST00000244763 ZNF608Q9ULD9 1512 aaPredicted RBP8.25□□□□□ -1.09
SSR1-201ENST00000244763 RTL1A6NKG5 1358 aa8.25□□□□□ -1.09
SSR1-201ENST00000244763 MROH5Q6ZUA9 1318 aa8.25□□□□□ -1.09
SSR1-201ENST00000244763 KIF21AQ7Z4S6 1674 aa8.25□□□□□ -1.09
SSR1-201ENST00000244763 RNF187Q5TA31 235 aaPredicted RBP8.25□□□□□ -1.09
SSR1-201ENST00000244763 FAM200AQ8TCP9 573 aa8.25□□□□□ -1.09
SSR1-201ENST00000244763 IWS1Q96ST2 819 aa8.25□□□□□ -1.09
SSR1-201ENST00000244763 CREB3L3Q68CJ9 461 aa8.25□□□□□ -1.09
SSR1-201ENST00000244763 NCKAP5LQ9HCH0 1330 aa8.25□□□□□ -1.09
SSR1-201ENST00000244763 ATP5DP30049 168 aa8.25□□□□□ -1.09
SSR1-201ENST00000244763 LARGE2Q8N3Y3 721 aa8.25□□□□□ -1.09
SSR1-201ENST00000244763 GPR161Q8N6U8 529 aaKnown RBP8.25□□□□□ -1.09
SSR1-201ENST00000244763 TEKT1Q969V4 418 aa8.25□□□□□ -1.09
SSR1-201ENST00000244763 NUP58Q9BVL2 599 aa8.25□□□□□ -1.09
SSR1-201ENST00000244763 CFAP74Q9C0B2 1584 aa8.25□□□□□ -1.09
SSR1-201ENST00000244763 IBTKQ9P2D0 1353 aaPredicted RBP8.25□□□□□ -1.09
SSR1-201ENST00000244763 MCM7P33993 719 aa8.25□□□□□ -1.09
SSR1-201ENST00000244763 CCDC26Q8TAB7 109 aa8.25□□□□□ -1.09
SSR1-201ENST00000244763 JARID2Q92833 1246 aaPredicted RBP8.25□□□□□ -1.09
SSR1-201ENST00000244763 SMC6Q96SB8 1091 aa8.25□□□□□ -1.09
SSR1-201ENST00000244763 STK10O94804 968 aaKnown RBP8.25□□□□□ -1.09
SSR1-201ENST00000244763 UFL1O94874 794 aa8.25□□□□□ -1.09
SSR1-201ENST00000244763 NIM1KQ8IY84 436 aa8.25□□□□□ -1.09
SSR1-201ENST00000244763 LPIN2Q92539 896 aa8.25□□□□□ -1.09
SSR1-201ENST00000244763 CFAP65Q6ZU64 1925 aaKnown RBP8.25□□□□□ -1.09
SSR1-201ENST00000244763 CNGA1P29973 690 aa8.25□□□□□ -1.09
SSR1-201ENST00000244763 NMIQ13287 307 aaPredicted RBP8.25□□□□□ -1.09
SSR1-201ENST00000244763 USP48Q86UV5 1035 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms