RNA–Protein interactions for RNA: ENST00000244709.8

TREM1-201, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TREM1, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-201ENST00000244709 ZNF532Q9HCE3 1301 aa13.87□□□□□ -0.19
TREM1-201ENST00000244709 TCRBV5S4A2TA0A5A2 114 aa13.86□□□□□ -0.19
TREM1-201ENST00000244709 PSMD14O00487 310 aa13.86□□□□□ -0.19
TREM1-201ENST00000244709 ZFYP08048 801 aaPredicted RBP13.86□□□□□ -0.19
TREM1-201ENST00000244709 FKBP1AP62942 108 aaKnown RBP13.86□□□□□ -0.19
TREM1-201ENST00000244709 MECOMQ03112 1051 aa13.86□□□□□ -0.19
TREM1-201ENST00000244709 ZMYM1Q5SVZ6 1142 aa13.86□□□□□ -0.19
TREM1-201ENST00000244709 FZD9O00144 591 aa13.85□□□□□ -0.19
TREM1-201ENST00000244709 GRIN3BO60391 1043 aa13.85□□□□□ -0.19
TREM1-201ENST00000244709 UBE3CQ15386 1083 aa13.85□□□□□ -0.19
TREM1-201ENST00000244709 DZIP1Q86YF9 867 aaKnown RBP13.85□□□□□ -0.19
TREM1-201ENST00000244709 SEC62Q99442 399 aaKnown RBP13.85□□□□□ -0.19
TREM1-201ENST00000244709 ESYT1Q9BSJ8 1104 aa13.85□□□□□ -0.19
TREM1-201ENST00000244709 BACH2Q9BYV9 841 aa13.85□□□□□ -0.19
TREM1-201ENST00000244709 F8W031 263 aaPredicted RBP13.85□□□□□ -0.19
TREM1-201ENST00000244709 M0R2C6 588 aa13.85□□□□□ -0.19
TREM1-201ENST00000244709 VIL1P09327 827 aaKnown RBP13.85□□□□□ -0.19
TREM1-201ENST00000244709 CXCL9Q07325 125 aa13.85□□□□□ -0.19
TREM1-201ENST00000244709 CIAPIN1Q6FI81 312 aa13.85□□□□□ -0.19
TREM1-201ENST00000244709 NAA16Q6N069 864 aaPredicted RBP13.85□□□□□ -0.19
TREM1-201ENST00000244709 RSBN1LQ6PCB5 846 aaPredicted RBP13.85□□□□□ -0.19
TREM1-201ENST00000244709 ADGRA1Q86SQ6 560 aa13.85□□□□□ -0.19
TREM1-201ENST00000244709 APPBP2Q92624 585 aa13.85□□□□□ -0.19
TREM1-201ENST00000244709 OSBP2Q969R2 916 aa13.85□□□□□ -0.19
TREM1-201ENST00000244709 RNF181Q9P0P0 153 aa13.85□□□□□ -0.19
TREM1-201ENST00000244709 SUGT1Q9Y2Z0 365 aa13.85□□□□□ -0.19
TREM1-201ENST00000244709 SGSM2O43147 1006 aa13.84□□□□□ -0.19
TREM1-201ENST00000244709 SEC24BO95487 1268 aa13.84□□□□□ -0.19
TREM1-201ENST00000244709 CYP7A1P22680 504 aa13.84□□□□□ -0.19
TREM1-201ENST00000244709 EIF6P56537 245 aaKnown RBP13.84□□□□□ -0.19
TREM1-201ENST00000244709 DIXDC1Q155Q3 683 aa13.84□□□□□ -0.19
TREM1-201ENST00000244709 CCDC129Q6ZRS4 1044 aa13.84□□□□□ -0.19
TREM1-201ENST00000244709 RUFY2Q8WXA3 655 aa13.84□□□□□ -0.19
TREM1-201ENST00000244709 PUS7LQ9H0K6 701 aaKnown RBP13.84□□□□□ -0.19
TREM1-201ENST00000244709 HELLSQ9NRZ9 838 aa13.84□□□□□ -0.19
TREM1-201ENST00000244709 TTF2Q9UNY4 1162 aaKnown RBP13.84□□□□□ -0.19
TREM1-201ENST00000244709 MAST3O60307 1309 aa13.84□□□□□ -0.19
TREM1-201ENST00000244709 RAD50Q92878 1312 aa13.84□□□□□ -0.19
TREM1-201ENST00000244709 ZNF541Q9H0D2 1346 aa13.84□□□□□ -0.19
TREM1-201ENST00000244709 IGSF3O75054 1194 aa13.83□□□□□ -0.2
TREM1-201ENST00000244709 MCMDC2Q4G0Z9 681 aa13.83□□□□□ -0.2
TREM1-201ENST00000244709 C9orf131Q5VYM1 1079 aa13.83□□□□□ -0.2
TREM1-201ENST00000244709 ZNF589Q86UQ0 364 aaPredicted RBP13.83□□□□□ -0.2
TREM1-201ENST00000244709 KIAA0825Q8IV33 1275 aa13.83□□□□□ -0.2
TREM1-201ENST00000244709 ZBTB12Q9Y330 459 aaPredicted RBP13.83□□□□□ -0.2
TREM1-201ENST00000244709 MFAP1P55081 439 aaKnown RBP13.82□□□□□ -0.2
TREM1-201ENST00000244709 GSTO1P78417 241 aa13.82□□□□□ -0.2
TREM1-201ENST00000244709 TNIP1Q15025 636 aa13.82□□□□□ -0.2
TREM1-201ENST00000244709 MIGA1Q8NAN2 632 aa13.82□□□□□ -0.2
TREM1-201ENST00000244709 MYO3BQ8WXR4 1341 aa13.82□□□□□ -0.2
TREM1-201ENST00000244709 SCNN1DP51172 638 aa13.82□□□□□ -0.2
TREM1-201ENST00000244709 GMLQ99445 158 aa13.82□□□□□ -0.2
TREM1-201ENST00000244709 CDK5RAP2Q96SN8 1893 aa13.82□□□□□ -0.2
TREM1-201ENST00000244709 MROH7-TTC4A0A0A0MT08 1334 aa13.81□□□□□ -0.2
TREM1-201ENST00000244709 CCDC171Q6TFL3 1326 aa13.81□□□□□ -0.2
TREM1-201ENST00000244709 GPAA1O43292 621 aa13.81□□□□□ -0.2
TREM1-201ENST00000244709 MBD4O95243 580 aa13.81□□□□□ -0.2
TREM1-201ENST00000244709 TMED8Q6PL24 325 aaPredicted RBP13.81□□□□□ -0.2
TREM1-201ENST00000244709 AGBL3Q8NEM8 1001 aa13.81□□□□□ -0.2
TREM1-201ENST00000244709 GJA3Q9Y6H8 435 aa13.81□□□□□ -0.2
TREM1-201ENST00000244709 ECM29Q5VYK3 1845 aa13.81□□□□□ -0.2
TREM1-201ENST00000244709 MAGEB6P1A0A0J9YX57 407 aa13.8□□□□□ -0.2
TREM1-201ENST00000244709 DYNLL1P63167 89 aaKnown RBP13.8□□□□□ -0.2
TREM1-201ENST00000244709 SLF2Q8IX21 1173 aa13.8□□□□□ -0.2
TREM1-201ENST00000244709 LCORLQ8N3X6 602 aa13.8□□□□□ -0.2
TREM1-201ENST00000244709 AIDAQ96BJ3 306 aa13.8□□□□□ -0.2
TREM1-201ENST00000244709 ARMT1Q9H993 441 aa13.8□□□□□ -0.2
TREM1-201ENST00000244709 ANO2Q9NQ90 1003 aa13.8□□□□□ -0.2
TREM1-201ENST00000244709 AATFQ9NY61 560 aaKnown RBP eCLIP13.8□□□□□ -0.2
TREM1-201ENST00000244709 GAKO14976 1311 aa13.8□□□□□ -0.2
TREM1-201ENST00000244709 LDHCP07864 332 aa13.79□□□□□ -0.2
TREM1-201ENST00000244709 BTDP43251 543 aa13.79□□□□□ -0.2
TREM1-201ENST00000244709 CRKP46108 304 aa13.79□□□□□ -0.2
TREM1-201ENST00000244709 TEKT1Q969V4 418 aa13.79□□□□□ -0.2
TREM1-201ENST00000244709 FAM163AQ96GL9 167 aaPredicted RBP13.79□□□□□ -0.2
TREM1-201ENST00000244709 RIOK1Q9BRS2 568 aaKnown RBP13.79□□□□□ -0.2
TREM1-201ENST00000244709 LSG1Q9H089 658 aaKnown RBP13.79□□□□□ -0.2
TREM1-201ENST00000244709 DAGLAQ9Y4D2 1042 aa13.79□□□□□ -0.2
TREM1-201ENST00000244709 FOCADQ5VW36 1801 aa13.79□□□□□ -0.2
TREM1-201ENST00000244709 REC8O95072 547 aa13.79□□□□□ -0.2
TREM1-201ENST00000244709 GMPSP49915 693 aaPredicted RBP13.79□□□□□ -0.2
TREM1-201ENST00000244709 PTH1RQ03431 593 aa13.79□□□□□ -0.2
TREM1-201ENST00000244709 VPS53Q5VIR6 699 aa13.79□□□□□ -0.2
TREM1-201ENST00000244709 STRBPQ96SI9 672 aaKnown RBP13.79□□□□□ -0.2
TREM1-201ENST00000244709 SERPINA10Q9UK55 444 aa13.79□□□□□ -0.2
TREM1-201ENST00000244709 PCDHAC2Q9Y5I4 1007 aa13.79□□□□□ -0.2
TREM1-201ENST00000244709 BAZ2AQ9UIF9 1905 aaKnown RBP13.78□□□□□ -0.2
TREM1-201ENST00000244709 GPR75-ASB3A0A0A6YYF3 556 aa13.78□□□□□ -0.2
TREM1-201ENST00000244709 SHTN1A0MZ66 631 aa13.78□□□□□ -0.2
TREM1-201ENST00000244709 RPS12P25398 132 aaKnown RBP13.78□□□□□ -0.2
TREM1-201ENST00000244709 HHIPL2Q6UWX4 724 aa13.78□□□□□ -0.2
TREM1-201ENST00000244709 KIAA1211Q6ZU35 1233 aa13.78□□□□□ -0.2
TREM1-201ENST00000244709 GPC2Q8N158 579 aa13.78□□□□□ -0.2
TREM1-201ENST00000244709 NOL10Q9BSC4 688 aaKnown RBP13.78□□□□□ -0.2
TREM1-201ENST00000244709 MRIQ9BWK5 157 aa13.78□□□□□ -0.2
TREM1-201ENST00000244709 HDAC9Q9UKV0 1011 aa13.78□□□□□ -0.2
TREM1-201ENST00000244709 NAV1Q8NEY1 1877 aa13.77□□□□□ -0.2
TREM1-201ENST00000244709 EIF5BO60841 1220 aaKnown RBP13.77□□□□□ -0.21
TREM1-201ENST00000244709 USP17L8P0C7I0 530 aa13.77□□□□□ -0.21
TREM1-201ENST00000244709 HSPD1P10809 573 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms