RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 HAND2P61296 217 aa15.47■□□□□ 0.07
HIF3A-201ENST00000244302 STRBPQ96SI9 672 aaKnown RBP15.47■□□□□ 0.07
HIF3A-201ENST00000244302 FGAP02671 866 aa15.46■□□□□ 0.07
HIF3A-201ENST00000244302 NEK4P51957 841 aa15.46■□□□□ 0.07
HIF3A-201ENST00000244302 CERS5Q8N5B7 392 aa15.46■□□□□ 0.07
HIF3A-201ENST00000244302 INCENPQ9NQS7 918 aa15.46■□□□□ 0.07
HIF3A-201ENST00000244302 SNED1Q8TER0 1413 aa15.46■□□□□ 0.07
HIF3A-201ENST00000244302 F8W031 263 aaPredicted RBP15.46■□□□□ 0.06
HIF3A-201ENST00000244302 SEMA3EO15041 775 aa15.46■□□□□ 0.06
HIF3A-201ENST00000244302 EVX2Q03828 476 aa15.46■□□□□ 0.06
HIF3A-201ENST00000244302 STOX1Q6ZVD7 989 aa15.46■□□□□ 0.06
HIF3A-201ENST00000244302 TMX4Q9H1E5 349 aaPredicted RBP15.46■□□□□ 0.06
HIF3A-201ENST00000244302 ZNF277Q9NRM2 450 aaPredicted RBP15.46■□□□□ 0.06
HIF3A-201ENST00000244302 NAA16Q6N069 864 aaPredicted RBP15.45■□□□□ 0.06
HIF3A-201ENST00000244302 ZSCAN25Q6NSZ9 544 aa15.45■□□□□ 0.06
HIF3A-201ENST00000244302 SDR42E1Q8WUS8 393 aa15.45■□□□□ 0.06
HIF3A-201ENST00000244302 AIDAQ96BJ3 306 aa15.45■□□□□ 0.06
HIF3A-201ENST00000244302 FOXD4L1Q9NU39 408 aa15.45■□□□□ 0.06
HIF3A-201ENST00000244302 APPP05067 770 aa15.44■□□□□ 0.06
HIF3A-201ENST00000244302 MFSD14BQ5SR56 506 aa15.44■□□□□ 0.06
HIF3A-201ENST00000244302 STK11IPQ8N1F8 1099 aa15.44■□□□□ 0.06
HIF3A-201ENST00000244302 JAKMIP1Q96N16 626 aaKnown RBP15.44■□□□□ 0.06
HIF3A-201ENST00000244302 EPB41L4AQ9HCS5 686 aaPredicted RBP15.44■□□□□ 0.06
HIF3A-201ENST00000244302 AATFQ9NY61 560 aaKnown RBP eCLIP15.44■□□□□ 0.06
HIF3A-201ENST00000244302 PIM2Q9P1W9 311 aa15.44■□□□□ 0.06
HIF3A-201ENST00000244302 MCCP23508 829 aa15.44■□□□□ 0.06
HIF3A-201ENST00000244302 KCNB2Q92953 911 aa15.44■□□□□ 0.06
HIF3A-201ENST00000244302 RIOK1Q9BRS2 568 aaKnown RBP15.44■□□□□ 0.06
HIF3A-201ENST00000244302 MYH7P12883 1935 aa15.44■□□□□ 0.06
HIF3A-201ENST00000244302 MYH13Q9UKX3 1938 aa15.44■□□□□ 0.06
HIF3A-201ENST00000244302 CASTP20810 708 aaKnown RBP15.43■□□□□ 0.06
HIF3A-201ENST00000244302 TGFB2P61812 414 aa15.43■□□□□ 0.06
HIF3A-201ENST00000244302 RABEP1Q15276 862 aa15.43■□□□□ 0.06
HIF3A-201ENST00000244302 DSCC1Q9BVC3 393 aa15.43■□□□□ 0.06
HIF3A-201ENST00000244302 RTFDC1Q9BY42 306 aaPredicted RBP15.43■□□□□ 0.06
HIF3A-201ENST00000244302 COA1Q9GZY4 146 aa15.43■□□□□ 0.06
HIF3A-201ENST00000244302 BCS1LQ9Y276 419 aa15.43■□□□□ 0.06
HIF3A-201ENST00000244302 TACC3Q9Y6A5 838 aa15.43■□□□□ 0.06
HIF3A-201ENST00000244302 YDJCA8MPS7 323 aa15.43■□□□□ 0.06
HIF3A-201ENST00000244302 GSG1L2A8MUP6 293 aa15.43■□□□□ 0.06
HIF3A-201ENST00000244302 LDHBP07195 334 aaKnown RBP15.43■□□□□ 0.06
HIF3A-201ENST00000244302 LRRFIP1Q32MZ4 808 aaKnown RBP15.43■□□□□ 0.06
HIF3A-201ENST00000244302 PCDHAC2Q9Y5I4 1007 aa15.43■□□□□ 0.06
HIF3A-201ENST00000244302 DOCK2Q92608 1830 aa15.43■□□□□ 0.06
HIF3A-201ENST00000244302 G3V3G9 751 aa15.42■□□□□ 0.06
HIF3A-201ENST00000244302 SLC4A8Q2Y0W8 1093 aa15.42■□□□□ 0.06
HIF3A-201ENST00000244302 DCAF8Q5TAQ9 597 aa15.42■□□□□ 0.06
HIF3A-201ENST00000244302 WDR66Q8TBY9 1149 aa15.42■□□□□ 0.06
HIF3A-201ENST00000244302 NBPF3Q9H094 633 aa15.42■□□□□ 0.06
HIF3A-201ENST00000244302 SLC4A4Q9Y6R1 1079 aa15.42■□□□□ 0.06
HIF3A-201ENST00000244302 CYP2D7A0A087X1C5 515 aa15.41■□□□□ 0.06
HIF3A-201ENST00000244302 MAGEB6P1A0A0J9YX57 407 aa15.41■□□□□ 0.06
HIF3A-201ENST00000244302 PPIP5K2O43314 1243 aa15.41■□□□□ 0.06
HIF3A-201ENST00000244302 ECE2O60344 883 aa15.41■□□□□ 0.06
HIF3A-201ENST00000244302 ANAPC15P60006 121 aa15.41■□□□□ 0.06
HIF3A-201ENST00000244302 CHST3Q7LGC8 479 aa15.41■□□□□ 0.06
HIF3A-201ENST00000244302 DZIP1Q86YF9 867 aaKnown RBP15.41■□□□□ 0.06
HIF3A-201ENST00000244302 LRRC2Q9BYS8 371 aa15.41■□□□□ 0.06
HIF3A-201ENST00000244302 U3KPZ7 1027 aaPredicted RBP15.41■□□□□ 0.06
HIF3A-201ENST00000244302 KIAA1551Q9HCM1 1747 aa15.41■□□□□ 0.06
HIF3A-201ENST00000244302 COL4A5P29400 1685 aa15.41■□□□□ 0.06
HIF3A-201ENST00000244302 SCNN1DP51172 638 aa15.41■□□□□ 0.06
HIF3A-201ENST00000244302 DALRD3Q5D0E6 543 aaKnown RBP15.41■□□□□ 0.06
HIF3A-201ENST00000244302 IFNL3Q8IZI9 196 aa15.41■□□□□ 0.06
HIF3A-201ENST00000244302 PDS5AQ29RF7 1337 aaKnown RBP15.4■□□□□ 0.06
HIF3A-201ENST00000244302 EPB41L2O43491 1005 aaKnown RBP15.4■□□□□ 0.06
HIF3A-201ENST00000244302 EIF5BO60841 1220 aaKnown RBP15.4■□□□□ 0.06
HIF3A-201ENST00000244302 CCDC93Q567U6 631 aa15.4■□□□□ 0.06
HIF3A-201ENST00000244302 IL17RAQ96F46 866 aa15.4■□□□□ 0.06
HIF3A-201ENST00000244302 EYA3Q99504 573 aa15.4■□□□□ 0.06
HIF3A-201ENST00000244302 SLKQ9H2G2 1235 aaPredicted RBP15.4■□□□□ 0.06
HIF3A-201ENST00000244302 SCN9AQ15858 1988 aa15.4■□□□□ 0.06
HIF3A-201ENST00000244302 SALL1Q9NSC2 1324 aa15.4■□□□□ 0.06
HIF3A-201ENST00000244302 KIF13BQ9NQT8 1826 aa15.4■□□□□ 0.06
HIF3A-201ENST00000244302 PATL2C9JE40 543 aaKnown RBP15.4■□□□□ 0.06
HIF3A-201ENST00000244302 PRELPP51888 382 aa15.4■□□□□ 0.06
HIF3A-201ENST00000244302 KIAA2012Q0VF49 1180 aa15.4■□□□□ 0.06
HIF3A-201ENST00000244302 TICAM2Q86XR7 235 aa15.4■□□□□ 0.06
HIF3A-201ENST00000244302 SNX21Q969T3 373 aa15.4■□□□□ 0.06
HIF3A-201ENST00000244302 SPON1Q9HCB6 807 aa15.4■□□□□ 0.06
HIF3A-201ENST00000244302 CD2APQ9Y5K6 639 aa15.4■□□□□ 0.06
HIF3A-201ENST00000244302 FAM205AQ6ZU69 1335 aa15.39■□□□□ 0.05
HIF3A-201ENST00000244302 ZKSCAN1P17029 563 aaPredicted RBP15.39■□□□□ 0.05
HIF3A-201ENST00000244302 CTDSPL2Q05D32 466 aa15.39■□□□□ 0.05
HIF3A-201ENST00000244302 TTC14Q96N46 770 aa15.39■□□□□ 0.05
HIF3A-201ENST00000244302 FHDC1Q9C0D6 1143 aaPredicted RBP15.39■□□□□ 0.05
HIF3A-201ENST00000244302 E7EWF7 191 aa15.38■□□□□ 0.05
HIF3A-201ENST00000244302 NFKBIEO00221 500 aa15.38■□□□□ 0.05
HIF3A-201ENST00000244302 RAD17O75943 681 aa15.38■□□□□ 0.05
HIF3A-201ENST00000244302 TBC1D10CQ8IV04 446 aa15.38■□□□□ 0.05
HIF3A-201ENST00000244302 HSCBQ8IWL3 235 aa15.38■□□□□ 0.05
HIF3A-201ENST00000244302 SH3RF3Q8TEJ3 882 aaPredicted RBP15.38■□□□□ 0.05
HIF3A-201ENST00000244302 ZSWIM6Q9HCJ5 1215 aa15.38■□□□□ 0.05
HIF3A-201ENST00000244302 GPHNQ9NQX3 736 aaPredicted RBP15.38■□□□□ 0.05
HIF3A-201ENST00000244302 AK2P54819 239 aa15.38■□□□□ 0.05
HIF3A-201ENST00000244302 RASSF7Q02833 373 aa15.38■□□□□ 0.05
HIF3A-201ENST00000244302 KIAA0825Q8IV33 1275 aa15.38■□□□□ 0.05
HIF3A-201ENST00000244302 DLEC1Q9Y238 1755 aa15.37■□□□□ 0.05
HIF3A-201ENST00000244302 LARGE1O95461 756 aa15.37■□□□□ 0.05
HIF3A-201ENST00000244302 DACT2Q5SW24 774 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms