RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 GNGT1P63211 74 aa8.49□□□□□ -1.05
RIF1-201ENST00000243326 MTHFSDQ2M296 383 aaKnown RBP8.49□□□□□ -1.05
RIF1-201ENST00000243326 COPS6Q7L5N1 327 aa8.49□□□□□ -1.05
RIF1-201ENST00000243326 JAKMIP2Q96AA8 810 aa8.49□□□□□ -1.05
RIF1-201ENST00000243326 PPP1R12BO60237 982 aaPredicted RBP8.48□□□□□ -1.05
RIF1-201ENST00000243326 MYL5Q02045 173 aa8.48□□□□□ -1.05
RIF1-201ENST00000243326 ZNF692Q9BU19 519 aaPredicted RBP8.48□□□□□ -1.05
RIF1-201ENST00000243326 BAIAP2L1Q9UHR4 511 aa8.48□□□□□ -1.05
RIF1-201ENST00000243326 PLCB3Q01970 1234 aa8.48□□□□□ -1.05
RIF1-201ENST00000243326 TEX11Q8IYF3 940 aa8.48□□□□□ -1.05
RIF1-201ENST00000243326 COMMD10Q9Y6G5 202 aa8.48□□□□□ -1.05
RIF1-201ENST00000243326 DHX29Q7Z478 1369 aaKnown RBP8.48□□□□□ -1.05
RIF1-201ENST00000243326 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.48□□□□□ -1.051e-7■■□□□ 13.1
RIF1-201ENST00000243326 CABLES1Q8TDN4 633 aa8.48□□□□□ -1.05
RIF1-201ENST00000243326 SNAPC4Q5SXM2 1469 aa8.48□□□□□ -1.05
RIF1-201ENST00000243326 PNMA6EA0A0J9YXQ4 647 aa8.48□□□□□ -1.05
RIF1-201ENST00000243326 SORBS3O60504 671 aa8.48□□□□□ -1.05
RIF1-201ENST00000243326 IFIT1BQ5T764 474 aaKnown RBP8.48□□□□□ -1.05
RIF1-201ENST00000243326 FAM114A1Q8IWE2 563 aa8.48□□□□□ -1.05
RIF1-201ENST00000243326 MAGEB6Q8N7X4 407 aa8.48□□□□□ -1.05
RIF1-201ENST00000243326 DDX21Q9NR30 783 aaKnown RBP eCLIP8.48□□□□□ -1.05
RIF1-201ENST00000243326 GOLGA6L9A6NEM1 432 aa8.48□□□□□ -1.05
RIF1-201ENST00000243326 HARSP12081 509 aaKnown RBP8.48□□□□□ -1.05
RIF1-201ENST00000243326 CLIC6Q96NY7 704 aa8.48□□□□□ -1.05
RIF1-201ENST00000243326 PPP2R5DQ14738 602 aa8.48□□□□□ -1.05
RIF1-201ENST00000243326 ST7Q9NRC1 585 aa8.48□□□□□ -1.05
RIF1-201ENST00000243326 CWC25Q9NXE8 425 aaPredicted RBP8.48□□□□□ -1.05
RIF1-201ENST00000243326 PPP2R5CQ13362 524 aa8.48□□□□□ -1.05
RIF1-201ENST00000243326 RIPOR2Q9Y4F9 1068 aa8.48□□□□□ -1.05
RIF1-201ENST00000243326 PPP1R7Q15435 360 aa8.48□□□□□ -1.05
RIF1-201ENST00000243326 ZNF131P52739 623 aa8.48□□□□□ -1.05
RIF1-201ENST00000243326 FEZ1Q99689 392 aa8.48□□□□□ -1.05
RIF1-201ENST00000243326 DPH5Q9H2P9 285 aa8.48□□□□□ -1.05
RIF1-201ENST00000243326 KRT9P35527 623 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 ANKRD42Q8N9B4 389 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 RPS6KB1P23443 525 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 CETN2P41208 172 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 NAPAP54920 295 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 EPC1Q9H2F5 836 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 GOLGA6CA6NDK9 693 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 GOLGA6DP0CG33 693 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 POTEJP0CG39 1038 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 PTH1RQ03431 593 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 EIF4A2Q14240 407 aaKnown RBP8.47□□□□□ -1.05
RIF1-201ENST00000243326 CAVIN4Q5BKX8 364 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 GOLGA6AQ9NYA3 693 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 ZMYM4Q5VZL5 1548 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 CHMP2AO43633 222 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 NELFCDQ8IXH7 590 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 PDIA4P13667 645 aaKnown RBP8.47□□□□□ -1.05
RIF1-201ENST00000243326 TIMM10P62072 90 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 DYMQ7RTS9 669 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 GRAMD1CQ8IYS0 662 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 BANK1Q8NDB2 785 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 CCDC42Q96M95 316 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 NSRP1Q9H0G5 558 aaKnown RBP8.47□□□□□ -1.05
RIF1-201ENST00000243326 TRIM35Q9UPQ4 493 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 SYNRGQ9UMZ2 1314 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 ANKRD13CQ8N6S4 541 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 SERTAD1Q9UHV2 236 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 CCT5P48643 541 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 PIK3R4Q99570 1358 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 RNF113AO15541 343 aaKnown RBP8.47□□□□□ -1.05
RIF1-201ENST00000243326 GSPT1P15170 499 aaKnown RBP8.47□□□□□ -1.05
RIF1-201ENST00000243326 CCDC196A0A1B0GTZ2 297 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 ACEP12821 1306 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 KIF5AQ12840 1032 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 ANKRD24Q8TF21 1146 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.47□□□□□ -1.05
RIF1-201ENST00000243326 INTS8Q75QN2 995 aaKnown RBP8.47□□□□□ -1.05
RIF1-201ENST00000243326 PARD3Q8TEW0 1356 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 KRT2P35908 639 aa8.47□□□□□ -1.05
RIF1-201ENST00000243326 ZNF445P59923 1031 aa8.46□□□□□ -1.05
RIF1-201ENST00000243326 DCTPP1Q9H773 170 aa8.46□□□□□ -1.05
RIF1-201ENST00000243326 C6orf229H3BNL8 230 aa8.46□□□□□ -1.05
RIF1-201ENST00000243326 BUB1O43683 1085 aa8.46□□□□□ -1.05
RIF1-201ENST00000243326 TNNI2P48788 182 aa8.46□□□□□ -1.05
RIF1-201ENST00000243326 ZBTB7BO15156 539 aaPredicted RBP8.46□□□□□ -1.05
RIF1-201ENST00000243326 ME3Q16798 604 aa8.46□□□□□ -1.05
RIF1-201ENST00000243326 HS1BP3Q53T59 392 aa8.46□□□□□ -1.05
RIF1-201ENST00000243326 PIK3AP1Q6ZUJ8 805 aa8.46□□□□□ -1.05
RIF1-201ENST00000243326 TRIM75PA6NK02 468 aa8.46□□□□□ -1.05
RIF1-201ENST00000243326 ZNF354CQ86Y25 554 aa8.46□□□□□ -1.05
RIF1-201ENST00000243326 SLC24A3Q9HC58 644 aa8.46□□□□□ -1.05
RIF1-201ENST00000243326 SBNO1A3KN83 1393 aa8.46□□□□□ -1.06
RIF1-201ENST00000243326 FMNL3Q8IVF7 1028 aa8.46□□□□□ -1.06
RIF1-201ENST00000243326 TAOK3Q9H2K8 898 aa8.46□□□□□ -1.06
RIF1-201ENST00000243326 GPCPD1Q9NPB8 672 aa8.46□□□□□ -1.06
RIF1-201ENST00000243326 MARCH10Q8NA82 808 aaPredicted RBP8.46□□□□□ -1.06
RIF1-201ENST00000243326 ARHGEF2Q92974 986 aaKnown RBP8.46□□□□□ -1.06
RIF1-201ENST00000243326 DBF4Q9UBU7 674 aaPredicted RBP8.46□□□□□ -1.06
RIF1-201ENST00000243326 RPGRIP1LQ68CZ1 1315 aa8.46□□□□□ -1.06
RIF1-201ENST00000243326 SARNPP82979 210 aaKnown RBP8.46□□□□□ -1.06
RIF1-201ENST00000243326 KIF22Q14807 665 aa8.46□□□□□ -1.06
RIF1-201ENST00000243326 RSRC1Q96IZ7 334 aaKnown RBP8.46□□□□□ -1.06
RIF1-201ENST00000243326 USTQ9Y2C2 406 aa8.46□□□□□ -1.06
RIF1-201ENST00000243326 CEP104O60308 925 aa8.46□□□□□ -1.06
RIF1-201ENST00000243326 PPM1FP49593 454 aaPredicted RBP8.46□□□□□ -1.06
RIF1-201ENST00000243326 ATP2B3Q16720 1220 aa8.46□□□□□ -1.06
RIF1-201ENST00000243326 USP28Q96RU2 1077 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms