RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 YY1P25490 414 aa12.33□□□□□ -0.44
HMGCL-201ENST00000235958 EPS15P42566 896 aa12.33□□□□□ -0.44
HMGCL-201ENST00000235958 MAP3K12Q12852 859 aa12.33□□□□□ -0.44
HMGCL-201ENST00000235958 SLC9C2Q5TAH2 1124 aa12.33□□□□□ -0.44
HMGCL-201ENST00000235958 MICALL2Q8IY33 904 aa12.33□□□□□ -0.44
HMGCL-201ENST00000235958 KBTBD3Q8NAB2 608 aa12.33□□□□□ -0.44
HMGCL-201ENST00000235958 ZNF384Q8TF68 577 aa12.33□□□□□ -0.44
HMGCL-201ENST00000235958 NSUN4Q96CB9 384 aaKnown RBP12.33□□□□□ -0.44
HMGCL-201ENST00000235958 L3MBTL3Q96JM7 780 aaPredicted RBP12.33□□□□□ -0.44
HMGCL-201ENST00000235958 HDAC9Q9UKV0 1011 aa12.33□□□□□ -0.44
HMGCL-201ENST00000235958 TIAM2Q8IVF5 1701 aa12.32□□□□□ -0.44
HMGCL-201ENST00000235958 POTECB2RU33 542 aa12.32□□□□□ -0.44
HMGCL-201ENST00000235958 IGSF3O75054 1194 aa12.32□□□□□ -0.44
HMGCL-201ENST00000235958 GSPT1P15170 499 aaKnown RBP12.32□□□□□ -0.44
HMGCL-201ENST00000235958 SDSP20132 328 aa12.32□□□□□ -0.44
HMGCL-201ENST00000235958 MMP14P50281 582 aa12.32□□□□□ -0.44
HMGCL-201ENST00000235958 ZNF280AP59817 542 aaPredicted RBP12.32□□□□□ -0.44
HMGCL-201ENST00000235958 HDLBPQ00341 1268 aaKnown RBP12.32□□□□□ -0.44
HMGCL-201ENST00000235958 DIXDC1Q155Q3 683 aa12.32□□□□□ -0.44
HMGCL-201ENST00000235958 RBM26Q5T8P6 1007 aaKnown RBP12.32□□□□□ -0.44
HMGCL-201ENST00000235958 DZIP1Q86YF9 867 aaKnown RBP12.32□□□□□ -0.44
HMGCL-201ENST00000235958 CNTROBQ8N137 903 aa12.32□□□□□ -0.44
HMGCL-201ENST00000235958 FAM163AQ96GL9 167 aaPredicted RBP12.32□□□□□ -0.44
HMGCL-201ENST00000235958 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.32□□□□□ -0.44
HMGCL-201ENST00000235958 RRAGCQ9HB90 399 aa12.32□□□□□ -0.44
HMGCL-201ENST00000235958 ZNF646O15015 1829 aaPredicted RBP12.32□□□□□ -0.44
HMGCL-201ENST00000235958 LDHCP07864 332 aa12.31□□□□□ -0.44
HMGCL-201ENST00000235958 CYP7A1P22680 504 aa12.31□□□□□ -0.44
HMGCL-201ENST00000235958 LMOD1P29536 600 aaPredicted RBP12.31□□□□□ -0.44
HMGCL-201ENST00000235958 CRKP46108 304 aa12.31□□□□□ -0.44
HMGCL-201ENST00000235958 RBM5P52756 815 aaKnown RBP eCLIP12.31□□□□□ -0.44
HMGCL-201ENST00000235958 GSTO1P78417 241 aa12.31□□□□□ -0.44
HMGCL-201ENST00000235958 SLFNL1Q499Z3 407 aa12.31□□□□□ -0.44
HMGCL-201ENST00000235958 NAA16Q6N069 864 aaPredicted RBP12.31□□□□□ -0.44
HMGCL-201ENST00000235958 HHIPL2Q6UWX4 724 aa12.31□□□□□ -0.44
HMGCL-201ENST00000235958 SAMD7Q7Z3H4 446 aa12.31□□□□□ -0.44
HMGCL-201ENST00000235958 MAGEB6Q8N7X4 407 aa12.31□□□□□ -0.44
HMGCL-201ENST00000235958 ZNF526Q8TF50 670 aaPredicted RBP12.31□□□□□ -0.44
HMGCL-201ENST00000235958 TEKT1Q969V4 418 aa12.31□□□□□ -0.44
HMGCL-201ENST00000235958 FSD1Q9BTV5 496 aa12.31□□□□□ -0.44
HMGCL-201ENST00000235958 SERPINA10Q9UK55 444 aa12.31□□□□□ -0.44
HMGCL-201ENST00000235958 PCDHAC2Q9Y5I4 1007 aa12.31□□□□□ -0.44
HMGCL-201ENST00000235958 MYH2Q9UKX2 1941 aa12.31□□□□□ -0.44
HMGCL-201ENST00000235958 RNF113AO15541 343 aaKnown RBP12.3□□□□□ -0.44
HMGCL-201ENST00000235958 CHGBP05060 677 aa12.3□□□□□ -0.44
HMGCL-201ENST00000235958 VEGFAP15692 232 aaPredicted RBP12.3□□□□□ -0.44
HMGCL-201ENST00000235958 PDE6AP16499 860 aa12.3□□□□□ -0.44
HMGCL-201ENST00000235958 DLGAP5Q15398 846 aa12.3□□□□□ -0.44
HMGCL-201ENST00000235958 CFAP100Q494V2 611 aa12.3□□□□□ -0.44
HMGCL-201ENST00000235958 BMP2KLQ5H9B9 411 aa12.3□□□□□ -0.44
HMGCL-201ENST00000235958 ZSCAN25Q6NSZ9 544 aa12.3□□□□□ -0.44
HMGCL-201ENST00000235958 SLF2Q8IX21 1173 aa12.3□□□□□ -0.44
HMGCL-201ENST00000235958 MTMR14Q8NCE2 650 aa12.3□□□□□ -0.44
HMGCL-201ENST00000235958 PRMT6Q96LA8 375 aaPredicted RBP12.3□□□□□ -0.44
HMGCL-201ENST00000235958 MYOZ2Q9NPC6 264 aa12.3□□□□□ -0.44
HMGCL-201ENST00000235958 HACL1Q9UJ83 578 aa12.3□□□□□ -0.44
HMGCL-201ENST00000235958 MAST3O60307 1309 aa12.3□□□□□ -0.44
HMGCL-201ENST00000235958 TCRBV5S4A2TA0A5A2 114 aa12.29□□□□□ -0.44
HMGCL-201ENST00000235958 EGFRP00533 1210 aa12.29□□□□□ -0.44
HMGCL-201ENST00000235958 EPHX2P34913 555 aa12.29□□□□□ -0.44
HMGCL-201ENST00000235958 ADD2P35612 726 aa12.29□□□□□ -0.44
HMGCL-201ENST00000235958 HIRAP54198 1017 aaPredicted RBP12.29□□□□□ -0.44
HMGCL-201ENST00000235958 UBE3CQ15386 1083 aa12.29□□□□□ -0.44
HMGCL-201ENST00000235958 LRRFIP1Q32MZ4 808 aaKnown RBP12.29□□□□□ -0.44
HMGCL-201ENST00000235958 TBC1D10BQ4KMP7 808 aaPredicted RBP12.29□□□□□ -0.44
HMGCL-201ENST00000235958 APOBEC3HQ6NTF7 200 aaKnown RBP12.29□□□□□ -0.44
HMGCL-201ENST00000235958 TICAM2Q86XR7 235 aa12.29□□□□□ -0.44
HMGCL-201ENST00000235958 ZDHHC15Q96MV8 337 aa12.29□□□□□ -0.44
HMGCL-201ENST00000235958 TAF1DQ9H5J8 278 aaPredicted RBP12.29□□□□□ -0.44
HMGCL-201ENST00000235958 ADARB2Q9NS39 739 aaKnown RBP12.29□□□□□ -0.44
HMGCL-201ENST00000235958 ZNF532Q9HCE3 1301 aa12.29□□□□□ -0.44
HMGCL-201ENST00000235958 POLR2AP24928 1970 aaKnown RBP12.29□□□□□ -0.44
HMGCL-201ENST00000235958 GPR75-ASB3A0A0A6YYF3 556 aa12.28□□□□□ -0.44
HMGCL-201ENST00000235958 IQCA1LA6NCM1 817 aa12.28□□□□□ -0.44
HMGCL-201ENST00000235958 WNT10BO00744 389 aa12.28□□□□□ -0.44
HMGCL-201ENST00000235958 ZFYP08048 801 aaPredicted RBP12.28□□□□□ -0.44
HMGCL-201ENST00000235958 PPP4CP60510 307 aa12.28□□□□□ -0.44
HMGCL-201ENST00000235958 NBPF9Q3BBW0 867 aa12.28□□□□□ -0.44
HMGCL-201ENST00000235958 TMED8Q6PL24 325 aaPredicted RBP12.28□□□□□ -0.44
HMGCL-201ENST00000235958 ADGRA1Q86SQ6 560 aa12.28□□□□□ -0.44
HMGCL-201ENST00000235958 ZBED3Q96IU2 234 aaPredicted RBP12.28□□□□□ -0.44
HMGCL-201ENST00000235958 NMRK2Q9NPI5 230 aa12.28□□□□□ -0.44
HMGCL-201ENST00000235958 DAGLAQ9Y4D2 1042 aa12.28□□□□□ -0.44
HMGCL-201ENST00000235958 AK9Q5TCS8 1911 aa12.27□□□□□ -0.44
HMGCL-201ENST00000235958 SPDYE2BA6NHP3 402 aa12.27□□□□□ -0.45
HMGCL-201ENST00000235958 SPDYE6P0CI01 402 aa12.27□□□□□ -0.45
HMGCL-201ENST00000235958 KIF4BQ2VIQ3 1234 aa12.27□□□□□ -0.45
HMGCL-201ENST00000235958 USP50Q70EL3 339 aaPredicted RBP12.27□□□□□ -0.45
HMGCL-201ENST00000235958 MIGA1Q8NAN2 632 aa12.27□□□□□ -0.45
HMGCL-201ENST00000235958 TRPM4Q8TD43 1214 aa12.27□□□□□ -0.45
HMGCL-201ENST00000235958 OSBP2Q969R2 916 aa12.27□□□□□ -0.45
HMGCL-201ENST00000235958 TDRD3Q9H7E2 651 aaKnown RBP12.27□□□□□ -0.45
HMGCL-201ENST00000235958 USP40Q9NVE5 1235 aa12.27□□□□□ -0.45
HMGCL-201ENST00000235958 MROH7-TTC4A0A0A0MT08 1334 aa12.27□□□□□ -0.45
HMGCL-201ENST00000235958 GAKO14976 1311 aa12.27□□□□□ -0.45
HMGCL-201ENST00000235958 DOCK2Q92608 1830 aa12.27□□□□□ -0.45
HMGCL-201ENST00000235958 MYH7P12883 1935 aa12.27□□□□□ -0.45
HMGCL-201ENST00000235958 SCN4AP35499 1836 aa12.26□□□□□ -0.45
HMGCL-201ENST00000235958 HIP1O00291 1037 aa12.26□□□□□ -0.45
HMGCL-201ENST00000235958 BAG3O95817 575 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms