RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 TXNRD3Q86VQ6 643 aa13.91□□□□□ -0.18
SF3B6-201ENST00000233468 FBXW7Q969H0 707 aa13.91□□□□□ -0.18
SF3B6-201ENST00000233468 FAM84BQ96KN1 310 aaPredicted RBP13.91□□□□□ -0.18
SF3B6-201ENST00000233468 NOP58Q9Y2X3 529 aaKnown RBP13.91□□□□□ -0.18
SF3B6-201ENST00000233468 SPEF2Q9C093 1822 aa13.9□□□□□ -0.18
SF3B6-201ENST00000233468 CCDC85CA6NKD9 419 aa13.9□□□□□ -0.18
SF3B6-201ENST00000233468 SNAP23O00161 211 aa13.9□□□□□ -0.18
SF3B6-201ENST00000233468 SASH1O94885 1247 aa13.9□□□□□ -0.18
SF3B6-201ENST00000233468 KLRK1P26718 216 aa13.9□□□□□ -0.18
SF3B6-201ENST00000233468 FBXO33Q7Z6M2 555 aa13.9□□□□□ -0.18
SF3B6-201ENST00000233468 OGFOD1Q8N543 542 aa13.9□□□□□ -0.18
SF3B6-201ENST00000233468 GPR108Q9NPR9 543 aa13.9□□□□□ -0.18
SF3B6-201ENST00000233468 ASTN2O75129 1339 aaPredicted RBP13.9□□□□□ -0.19
SF3B6-201ENST00000233468 IRS2Q9Y4H2 1338 aa13.9□□□□□ -0.19
SF3B6-201ENST00000233468 ADM5C9JUS6 153 aa13.89□□□□□ -0.19
SF3B6-201ENST00000233468 GYG1P46976 350 aa13.89□□□□□ -0.19
SF3B6-201ENST00000233468 FKBP1AP62942 108 aaKnown RBP13.89□□□□□ -0.19
SF3B6-201ENST00000233468 GTF2IP78347 998 aa13.89□□□□□ -0.19
SF3B6-201ENST00000233468 TFCP2Q12800 502 aa13.89□□□□□ -0.19
SF3B6-201ENST00000233468 GORABQ5T7V8 394 aa13.89□□□□□ -0.19
SF3B6-201ENST00000233468 KRT26Q7Z3Y9 468 aa13.89□□□□□ -0.19
SF3B6-201ENST00000233468 TDRD7Q8NHU6 1098 aaKnown RBP13.89□□□□□ -0.19
SF3B6-201ENST00000233468 HHIPL1Q96JK4 782 aa13.89□□□□□ -0.19
SF3B6-201ENST00000233468 HDAC9Q9UKV0 1011 aa13.89□□□□□ -0.19
SF3B6-201ENST00000233468 PSME4Q14997 1843 aa13.89□□□□□ -0.19
SF3B6-201ENST00000233468 RAB11FIP3O75154 756 aa13.88□□□□□ -0.19
SF3B6-201ENST00000233468 USP17L8P0C7I0 530 aa13.88□□□□□ -0.19
SF3B6-201ENST00000233468 HUNKP57058 714 aa13.88□□□□□ -0.19
SF3B6-201ENST00000233468 DACT2Q5SW24 774 aa13.88□□□□□ -0.19
SF3B6-201ENST00000233468 TBC1D22AQ8WUA7 517 aa13.88□□□□□ -0.19
SF3B6-201ENST00000233468 NEUROD6Q96NK8 337 aa13.88□□□□□ -0.19
SF3B6-201ENST00000233468 SUPT16HQ9Y5B9 1047 aaKnown RBP13.88□□□□□ -0.19
SF3B6-201ENST00000233468 A0A1B0GUL7 405 aa13.87□□□□□ -0.19
SF3B6-201ENST00000233468 FAM155AB1AL88 458 aaPredicted RBP13.87□□□□□ -0.19
SF3B6-201ENST00000233468 SEMA3EO15041 775 aa13.87□□□□□ -0.19
SF3B6-201ENST00000233468 BCAMP50895 628 aa13.87□□□□□ -0.19
SF3B6-201ENST00000233468 AKAP11Q9UKA4 1901 aa13.87□□□□□ -0.19
SF3B6-201ENST00000233468 ZNF609O15014 1411 aa13.87□□□□□ -0.19
SF3B6-201ENST00000233468 FAM205AQ6ZU69 1335 aa13.87□□□□□ -0.19
SF3B6-201ENST00000233468 GSE1Q14687 1217 aa13.86□□□□□ -0.19
SF3B6-201ENST00000233468 WDR66Q8TBY9 1149 aa13.86□□□□□ -0.19
SF3B6-201ENST00000233468 KIF1BPQ96EK5 621 aa13.86□□□□□ -0.19
SF3B6-201ENST00000233468 KIF12Q96FN5 646 aa13.86□□□□□ -0.19
SF3B6-201ENST00000233468 MS4A3Q96HJ5 214 aa13.86□□□□□ -0.19
SF3B6-201ENST00000233468 CRBNQ96SW2 442 aa13.86□□□□□ -0.19
SF3B6-201ENST00000233468 MCOLN1Q9GZU1 580 aa13.86□□□□□ -0.19
SF3B6-201ENST00000233468 DENND2AQ9ULE3 1009 aa13.86□□□□□ -0.19
SF3B6-201ENST00000233468 SCAF8Q9UPN6 1271 aaKnown RBP13.86□□□□□ -0.19
SF3B6-201ENST00000233468 ZNF280AP59817 542 aaPredicted RBP13.85□□□□□ -0.19
SF3B6-201ENST00000233468 TIMM10P62072 90 aa13.85□□□□□ -0.19
SF3B6-201ENST00000233468 KIF4BQ2VIQ3 1234 aa13.85□□□□□ -0.19
SF3B6-201ENST00000233468 CCDC158Q5M9N0 1113 aa13.85□□□□□ -0.19
SF3B6-201ENST00000233468 CLASRPQ8N2M8 674 aaKnown RBP13.85□□□□□ -0.19
SF3B6-201ENST00000233468 DCPSQ96C86 337 aaKnown RBP13.85□□□□□ -0.19
SF3B6-201ENST00000233468 XAGE2Q96GT9 111 aa13.85□□□□□ -0.19
SF3B6-201ENST00000233468 DCBLD2Q96PD2 775 aa13.85□□□□□ -0.19
SF3B6-201ENST00000233468 GMLQ99445 158 aa13.85□□□□□ -0.19
SF3B6-201ENST00000233468 GBA2Q9HCG7 927 aaPredicted RBP13.85□□□□□ -0.19
SF3B6-201ENST00000233468 EXOC6BQ9Y2D4 811 aa13.85□□□□□ -0.19
SF3B6-201ENST00000233468 SUGT1Q9Y2Z0 365 aa13.85□□□□□ -0.19
SF3B6-201ENST00000233468 ZNF646O15015 1829 aaPredicted RBP13.85□□□□□ -0.19
SF3B6-201ENST00000233468 UQCRFS1P1P0C7P4 283 aa13.84□□□□□ -0.19
SF3B6-201ENST00000233468 CHAF1AQ13111 956 aaPredicted RBP13.84□□□□□ -0.19
SF3B6-201ENST00000233468 NOGQ13253 232 aa13.84□□□□□ -0.19
SF3B6-201ENST00000233468 TNNI3KQ59H18 835 aa13.84□□□□□ -0.19
SF3B6-201ENST00000233468 MFSD14BQ5SR56 506 aa13.84□□□□□ -0.19
SF3B6-201ENST00000233468 CCDC102BQ68D86 513 aa13.84□□□□□ -0.19
SF3B6-201ENST00000233468 RGMBQ6NW40 437 aa13.84□□□□□ -0.19
SF3B6-201ENST00000233468 SIRT2Q8IXJ6 389 aa13.84□□□□□ -0.19
SF3B6-201ENST00000233468 ZGPATQ8N5A5 531 aaKnown RBP13.84□□□□□ -0.19
SF3B6-201ENST00000233468 GGA3Q9NZ52 723 aa13.84□□□□□ -0.19
SF3B6-201ENST00000233468 FPGT-TNNI3KV9GXZ4 949 aa13.84□□□□□ -0.19
SF3B6-201ENST00000233468 MAP3K13O43283 966 aa13.83□□□□□ -0.2
SF3B6-201ENST00000233468 CA12O43570 354 aa13.83□□□□□ -0.2
SF3B6-201ENST00000233468 KIF23Q02241 960 aaPredicted RBP13.83□□□□□ -0.2
SF3B6-201ENST00000233468 DGKZQ13574 1117 aa13.83□□□□□ -0.2
SF3B6-201ENST00000233468 C2orf69Q8N8R5 385 aa13.83□□□□□ -0.2
SF3B6-201ENST00000233468 RHPN1Q8TCX5 695 aa13.83□□□□□ -0.2
SF3B6-201ENST00000233468 MYOZ2Q9NPC6 264 aa13.83□□□□□ -0.2
SF3B6-201ENST00000233468 CIZ1Q9ULV3 898 aaPredicted RBP13.83□□□□□ -0.2
SF3B6-201ENST00000233468 MAST3O60307 1309 aa13.83□□□□□ -0.2
SF3B6-201ENST00000233468 ZNF157P51786 506 aaPredicted RBP13.82□□□□□ -0.2
SF3B6-201ENST00000233468 SCARF1Q14162 830 aa13.82□□□□□ -0.2
SF3B6-201ENST00000233468 TTC39AQ5SRH9 613 aa13.82□□□□□ -0.2
SF3B6-201ENST00000233468 KIAA0825Q8IV33 1275 aa13.82□□□□□ -0.2
SF3B6-201ENST00000233468 CDCA5Q96FF9 252 aa13.82□□□□□ -0.2
SF3B6-201ENST00000233468 MXD3Q9BW11 206 aa13.82□□□□□ -0.2
SF3B6-201ENST00000233468 LRRCC1Q9C099 1032 aa13.82□□□□□ -0.2
SF3B6-201ENST00000233468 IQSEC3Q9UPP2 1182 aaPredicted RBP13.82□□□□□ -0.2
SF3B6-201ENST00000233468 PDS5AQ29RF7 1337 aaKnown RBP13.82□□□□□ -0.2
SF3B6-201ENST00000233468 MYO1BO43795 1136 aa13.81□□□□□ -0.2
SF3B6-201ENST00000233468 TRPA1O75762 1119 aa13.81□□□□□ -0.2
SF3B6-201ENST00000233468 CENPBP07199 599 aaPredicted RBP13.81□□□□□ -0.2
SF3B6-201ENST00000233468 IFIT2P09913 472 aaKnown RBP13.81□□□□□ -0.2
SF3B6-201ENST00000233468 PYGBP11216 843 aa13.81□□□□□ -0.2
SF3B6-201ENST00000233468 ADORA1P30542 326 aa13.81□□□□□ -0.2
SF3B6-201ENST00000233468 PHKA1P46020 1223 aa13.81□□□□□ -0.2
SF3B6-201ENST00000233468 RGS19P49795 217 aa13.81□□□□□ -0.2
SF3B6-201ENST00000233468 MLLT1Q03111 559 aaPredicted RBP13.81□□□□□ -0.2
SF3B6-201ENST00000233468 DLGAP5Q15398 846 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms