RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 ZNF70Q9UC06 446 aaPredicted RBP22.42■■□□□ 1.18
PFN1-201ENST00000225655 FBXO3Q9UK99 471 aa22.42■■□□□ 1.18
PFN1-201ENST00000225655 FZD1Q9UP38 647 aa22.42■■□□□ 1.18
PFN1-201ENST00000225655 HDAC5Q9UQL6 1122 aa22.42■■□□□ 1.18
PFN1-201ENST00000225655 TRIM27P14373 513 aa22.41■■□□□ 1.18
PFN1-201ENST00000225655 CRKP46108 304 aa22.41■■□□□ 1.18
PFN1-201ENST00000225655 BCAMP50895 628 aa22.41■■□□□ 1.18
PFN1-201ENST00000225655 HDLBPQ00341 1268 aaKnown RBP22.41■■□□□ 1.18
PFN1-201ENST00000225655 CHAF1AQ13111 956 aaPredicted RBP22.41■■□□□ 1.18
PFN1-201ENST00000225655 RASA3Q14644 834 aa22.41■■□□□ 1.18
PFN1-201ENST00000225655 SPRYD7Q5W111 196 aa22.41■■□□□ 1.18
PFN1-201ENST00000225655 ATG9AQ7Z3C6 839 aa22.41■■□□□ 1.18
PFN1-201ENST00000225655 LAMB1P07942 1786 aa22.4■■□□□ 1.18
PFN1-201ENST00000225655 MYH13Q9UKX3 1938 aa22.4■■□□□ 1.18
PFN1-201ENST00000225655 CCDC85CA6NKD9 419 aa22.4■■□□□ 1.18
PFN1-201ENST00000225655 CIAO1O76071 339 aa22.4■■□□□ 1.18
PFN1-201ENST00000225655 SREBF2Q12772 1141 aa22.4■■□□□ 1.18
PFN1-201ENST00000225655 MKRN3Q13064 507 aaKnown RBP22.4■■□□□ 1.18
PFN1-201ENST00000225655 GRIK5Q16478 980 aa22.4■■□□□ 1.18
PFN1-201ENST00000225655 NBPF12Q5TAG4 269 aaPredicted RBP22.4■■□□□ 1.18
PFN1-201ENST00000225655 LPIN2Q92539 896 aa22.4■■□□□ 1.18
PFN1-201ENST00000225655 TDRD3Q9H7E2 651 aaKnown RBP22.4■■□□□ 1.18
PFN1-201ENST00000225655 SLC5A1P13866 664 aa22.39■■□□□ 1.17
PFN1-201ENST00000225655 SLC10A4Q96EP9 437 aa22.39■■□□□ 1.17
PFN1-201ENST00000225655 MRIQ9BWK5 157 aa22.38■■□□□ 1.17
PFN1-201ENST00000225655 SUGT1Q9Y2Z0 365 aa22.38■■□□□ 1.17
PFN1-201ENST00000225655 LRRFIP2Q9Y608 721 aaKnown RBP22.38■■□□□ 1.17
PFN1-201ENST00000225655 CENPBP07199 599 aaPredicted RBP22.37■■□□□ 1.17
PFN1-201ENST00000225655 ZBTB48P10074 688 aaPredicted RBP22.37■■□□□ 1.17
PFN1-201ENST00000225655 IREB2P48200 963 aaKnown RBP22.37■■□□□ 1.17
PFN1-201ENST00000225655 INTS3Q68E01 1043 aaKnown RBP22.37■■□□□ 1.17
PFN1-201ENST00000225655 TEKT1Q969V4 418 aa22.37■■□□□ 1.17
PFN1-201ENST00000225655 CLUAP1Q96AJ1 413 aa22.37■■□□□ 1.17
PFN1-201ENST00000225655 CLMNQ96JQ2 1002 aa22.37■■□□□ 1.17
PFN1-201ENST00000225655 TEPSINQ96N21 525 aa22.37■■□□□ 1.17
PFN1-201ENST00000225655 MAST3O60307 1309 aa22.36■■□□□ 1.17
PFN1-201ENST00000225655 USP2O75604 605 aaPredicted RBP22.36■■□□□ 1.17
PFN1-201ENST00000225655 TBC1D8O95759 1140 aa22.36■■□□□ 1.17
PFN1-201ENST00000225655 NOM1Q5C9Z4 860 aaKnown RBP22.36■■□□□ 1.17
PFN1-201ENST00000225655 ZDHHC15Q96MV8 337 aa22.36■■□□□ 1.17
PFN1-201ENST00000225655 MEIS3Q99687 375 aa22.36■■□□□ 1.17
PFN1-201ENST00000225655 CFHR5Q9BXR6 569 aa22.36■■□□□ 1.17
PFN1-201ENST00000225655 SIL1Q9H173 461 aa22.36■■□□□ 1.17
PFN1-201ENST00000225655 MANSC4A6NHS7 340 aaPredicted RBP22.35■■□□□ 1.17
PFN1-201ENST00000225655 TNNI2P48788 182 aa22.35■■□□□ 1.17
PFN1-201ENST00000225655 INHBEP58166 350 aa22.35■■□□□ 1.17
PFN1-201ENST00000225655 CTU1Q7Z7A3 348 aaKnown RBP22.35■■□□□ 1.17
PFN1-201ENST00000225655 WNK4Q96J92 1243 aa22.35■■□□□ 1.17
PFN1-201ENST00000225655 CEP126Q9P2H0 1117 aa22.35■■□□□ 1.17
PFN1-201ENST00000225655 OTOFQ9HC10 1997 aa22.35■■□□□ 1.17
PFN1-201ENST00000225655 TCP10L2B9ZVM9 353 aa22.34■■□□□ 1.17
PFN1-201ENST00000225655 IL15P40933 162 aaPredicted RBP22.34■■□□□ 1.17
PFN1-201ENST00000225655 ATP2B3Q16720 1220 aa22.34■■□□□ 1.17
PFN1-201ENST00000225655 ANKRD13AQ8IZ07 590 aa22.34■■□□□ 1.17
PFN1-201ENST00000225655 WDR66Q8TBY9 1149 aa22.34■■□□□ 1.17
PFN1-201ENST00000225655 COPRSQ9NQ92 184 aa22.34■■□□□ 1.17
PFN1-201ENST00000225655 ALDH1A1P00352 501 aa22.33■■□□□ 1.17
PFN1-201ENST00000225655 GNAI3P08754 354 aa22.33■■□□□ 1.17
PFN1-201ENST00000225655 ZNF296Q8WUU4 475 aaPredicted RBP22.33■■□□□ 1.17
PFN1-201ENST00000225655 TMEM39BQ9GZU3 492 aa22.33■■□□□ 1.17
PFN1-201ENST00000225655 RGS19P49795 217 aa22.32■■□□□ 1.16
PFN1-201ENST00000225655 APOBEC3HQ6NTF7 200 aaKnown RBP22.32■■□□□ 1.16
PFN1-201ENST00000225655 HHIPL2Q6UWX4 724 aa22.32■■□□□ 1.16
PFN1-201ENST00000225655 ITPRIPQ8IWB1 547 aa22.32■■□□□ 1.16
PFN1-201ENST00000225655 CDAN1Q8IWY9 1227 aa22.32■■□□□ 1.16
PFN1-201ENST00000225655 CHMP4BQ9H444 224 aaKnown RBP22.32■■□□□ 1.16
PFN1-201ENST00000225655 GPR25O00155 361 aa22.31■■□□□ 1.16
PFN1-201ENST00000225655 RRP1P56182 461 aaKnown RBP22.31■■□□□ 1.16
PFN1-201ENST00000225655 PDE3AQ14432 1141 aa22.31■■□□□ 1.16
PFN1-201ENST00000225655 FKBP1CQ5VVH2 108 aa22.31■■□□□ 1.16
PFN1-201ENST00000225655 IFNL1Q8IU54 200 aa22.31■■□□□ 1.16
PFN1-201ENST00000225655 GNL3LQ9NVN8 582 aaKnown RBP22.31■■□□□ 1.16
PFN1-201ENST00000225655 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.31■■□□□ 1.16
PFN1-201ENST00000225655 PA2G4Q9UQ80 394 aaKnown RBP22.31■■□□□ 1.16
PFN1-201ENST00000225655 ZBTB22O15209 634 aa22.3■■□□□ 1.16
PFN1-201ENST00000225655 MTX1Q13505 466 aa22.3■■□□□ 1.16
PFN1-201ENST00000225655 TMEM57Q8N5G2 664 aa22.3■■□□□ 1.16
PFN1-201ENST00000225655 TMOD2Q9NZR1 351 aa22.3■■□□□ 1.16
PFN1-201ENST00000225655 SEMA3EO15041 775 aa22.29■■□□□ 1.16
PFN1-201ENST00000225655 GJA5P36382 358 aa22.29■■□□□ 1.16
PFN1-201ENST00000225655 CACNB3P54284 484 aa22.29■■□□□ 1.16
PFN1-201ENST00000225655 PKN2Q16513 984 aaKnown RBP22.29■■□□□ 1.16
PFN1-201ENST00000225655 FAM83AQ86UY5 434 aa22.29■■□□□ 1.16
PFN1-201ENST00000225655 SRGAP3O43295 1099 aa22.28■■□□□ 1.16
PFN1-201ENST00000225655 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.28■■□□□ 1.16
PFN1-201ENST00000225655 SALL1Q9NSC2 1324 aa22.28■■□□□ 1.16
PFN1-201ENST00000225655 IGF2BP3O00425 579 aaKnown RBP eCLIP22.27■■□□□ 1.16
PFN1-201ENST00000225655 PHKA1P46020 1223 aa22.27■■□□□ 1.16
PFN1-201ENST00000225655 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.27■■□□□ 1.165e-69■■□□□ 13.8
PFN1-201ENST00000225655 PANK1Q8TE04 598 aa22.27■■□□□ 1.16
PFN1-201ENST00000225655 R3HDMLQ9H3Y0 253 aa22.27■■□□□ 1.16
PFN1-201ENST00000225655 ELP3Q9H9T3 547 aa22.27■■□□□ 1.16
PFN1-201ENST00000225655 DENND2AQ9ULE3 1009 aa22.27■■□□□ 1.16
PFN1-201ENST00000225655 TNNQ9UQP3 1299 aa22.27■■□□□ 1.16
PFN1-201ENST00000225655 RPAP1Q9BWH6 1393 aaPredicted RBP22.26■■□□□ 1.15
PFN1-201ENST00000225655 FKTNO75072 461 aa22.26■■□□□ 1.15
PFN1-201ENST00000225655 MAP3K9P80192 1104 aa22.26■■□□□ 1.15
PFN1-201ENST00000225655 MLLT1Q03111 559 aaPredicted RBP22.26■■□□□ 1.15
PFN1-201ENST00000225655 VGLL4Q14135 290 aa22.26■■□□□ 1.15
PFN1-201ENST00000225655 OPTNQ96CV9 577 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms