RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 BAG1Q99933 345 aaPredicted RBP16.51■□□□□ 0.23
SFXN3-201ENST00000224807 CARMIL3Q8ND23 1372 aa16.51■□□□□ 0.23
SFXN3-201ENST00000224807 CEMIPQ8WUJ3 1361 aa16.51■□□□□ 0.23
SFXN3-201ENST00000224807 ZNF609O15014 1411 aa16.51■□□□□ 0.23
SFXN3-201ENST00000224807 ADGRL3Q9HAR2 1447 aa16.51■□□□□ 0.23
SFXN3-201ENST00000224807 PI16Q6UXB8 463 aa16.51■□□□□ 0.23
SFXN3-201ENST00000224807 NLRP12P59046 1061 aa16.51■□□□□ 0.23
SFXN3-201ENST00000224807 LRRFIP1Q32MZ4 808 aaKnown RBP16.51■□□□□ 0.23
SFXN3-201ENST00000224807 MYSM1Q5VVJ2 828 aa16.51■□□□□ 0.23
SFXN3-201ENST00000224807 NAA16Q6N069 864 aaPredicted RBP16.51■□□□□ 0.23
SFXN3-201ENST00000224807 TRIM65Q6PJ69 517 aa16.51■□□□□ 0.23
SFXN3-201ENST00000224807 PAXIP1Q6ZW49 1069 aaPredicted RBP16.51■□□□□ 0.23
SFXN3-201ENST00000224807 RALYLQ86SE5 291 aaKnown RBP16.51■□□□□ 0.23
SFXN3-201ENST00000224807 CMTR1Q8N1G2 835 aaKnown RBP16.51■□□□□ 0.23
SFXN3-201ENST00000224807 TXLNBQ8N3L3 684 aa16.51■□□□□ 0.23
SFXN3-201ENST00000224807 SRRTQ9BXP5 876 aaKnown RBP16.51■□□□□ 0.23
SFXN3-201ENST00000224807 MROH7-TTC4A0A0A0MT08 1334 aa16.51■□□□□ 0.23
SFXN3-201ENST00000224807 ALDH1L1O75891 902 aa16.5■□□□□ 0.23
SFXN3-201ENST00000224807 CASP1P29466 404 aa16.5■□□□□ 0.23
SFXN3-201ENST00000224807 KIF4BQ2VIQ3 1234 aa16.5■□□□□ 0.23
SFXN3-201ENST00000224807 LEKR1Q6ZMV7 388 aa16.5■□□□□ 0.23
SFXN3-201ENST00000224807 AK7Q96M32 723 aa16.5■□□□□ 0.23
SFXN3-201ENST00000224807 TSPOAP1O95153 1857 aa16.5■□□□□ 0.23
SFXN3-201ENST00000224807 NCAPHQ15003 741 aa16.5■□□□□ 0.23
SFXN3-201ENST00000224807 AEBP2Q6ZN18 517 aaPredicted RBP16.5■□□□□ 0.23
SFXN3-201ENST00000224807 NFXL1Q6ZNB6 911 aa16.5■□□□□ 0.23
SFXN3-201ENST00000224807 STAMQ92783 540 aa16.5■□□□□ 0.23
SFXN3-201ENST00000224807 TNRQ92752 1358 aa16.5■□□□□ 0.23
SFXN3-201ENST00000224807 UBR1Q8IWV7 1749 aa16.5■□□□□ 0.23
SFXN3-201ENST00000224807 PSDA5PKW4 1024 aaPredicted RBP16.49■□□□□ 0.23
SFXN3-201ENST00000224807 VWA3AA6NCI4 1184 aa16.49■□□□□ 0.23
SFXN3-201ENST00000224807 SOWAHDA6NJG2 315 aa16.49■□□□□ 0.23
SFXN3-201ENST00000224807 HSPD1P10809 573 aaKnown RBP16.49■□□□□ 0.23
SFXN3-201ENST00000224807 LONRF2Q1L5Z9 754 aa16.49■□□□□ 0.23
SFXN3-201ENST00000224807 CCDC93Q567U6 631 aa16.49■□□□□ 0.23
SFXN3-201ENST00000224807 INCENPQ9NQS7 918 aa16.49■□□□□ 0.23
SFXN3-201ENST00000224807 MED23Q9ULK4 1368 aa16.49■□□□□ 0.23
SFXN3-201ENST00000224807 PRC1O43663 620 aa16.49■□□□□ 0.23
SFXN3-201ENST00000224807 CDC27P30260 824 aa16.49■□□□□ 0.23
SFXN3-201ENST00000224807 MYL5Q02045 173 aa16.49■□□□□ 0.23
SFXN3-201ENST00000224807 PDE4BQ07343 736 aa16.49■□□□□ 0.23
SFXN3-201ENST00000224807 ANO1Q5XXA6 986 aa16.49■□□□□ 0.23
SFXN3-201ENST00000224807 NFATC2IPQ8NCF5 419 aa16.49■□□□□ 0.23
SFXN3-201ENST00000224807 PAG1Q9NWQ8 432 aa16.49■□□□□ 0.23
SFXN3-201ENST00000224807 IMPACTQ9P2X3 320 aa16.49■□□□□ 0.23
SFXN3-201ENST00000224807 ZMYND10O75800 440 aa16.49■□□□□ 0.23
SFXN3-201ENST00000224807 HOXB7P09629 217 aa16.49■□□□□ 0.23
SFXN3-201ENST00000224807 IFIT1P09914 478 aaKnown RBP16.49■□□□□ 0.23
SFXN3-201ENST00000224807 REXO1L1PQ8IX06 675 aa16.49■□□□□ 0.23
SFXN3-201ENST00000224807 SMARCC2Q8TAQ2 1214 aa16.49■□□□□ 0.23
SFXN3-201ENST00000224807 FAN1Q9Y2M0 1017 aa16.49■□□□□ 0.23
SFXN3-201ENST00000224807 PCDHA5Q9Y5H7 936 aa16.49■□□□□ 0.23
SFXN3-201ENST00000224807 ZSCAN12O43309 604 aa16.48■□□□□ 0.23
SFXN3-201ENST00000224807 ZRANB2O95218 330 aaKnown RBP eCLIP16.48■□□□□ 0.23
SFXN3-201ENST00000224807 AKAP17AQ02040 695 aaKnown RBP16.48■□□□□ 0.23
SFXN3-201ENST00000224807 ZNF569Q5MCW4 686 aa16.48■□□□□ 0.23
SFXN3-201ENST00000224807 GPATCH11Q8N954 259 aa16.48■□□□□ 0.23
SFXN3-201ENST00000224807 ZC3H6P61129 1189 aaKnown RBP16.48■□□□□ 0.23
SFXN3-201ENST00000224807 PSME1Q06323 249 aa16.48■□□□□ 0.23
SFXN3-201ENST00000224807 RRP12Q5JTH9 1297 aaKnown RBP16.48■□□□□ 0.23
SFXN3-201ENST00000224807 JAKMIP3Q5VZ66 844 aa16.48■□□□□ 0.23
SFXN3-201ENST00000224807 ALDH8A1Q9H2A2 487 aaPredicted RBP16.48■□□□□ 0.23
SFXN3-201ENST00000224807 NFE2L3Q9Y4A8 694 aa16.48■□□□□ 0.23
SFXN3-201ENST00000224807 MED1Q15648 1581 aaPredicted RBP16.47■□□□□ 0.23
SFXN3-201ENST00000224807 EFCAB8A8MWE9 144 aa16.47■□□□□ 0.23
SFXN3-201ENST00000224807 AFMP43652 599 aa16.47■□□□□ 0.23
SFXN3-201ENST00000224807 GCKRQ14397 625 aa16.47■□□□□ 0.23
SFXN3-201ENST00000224807 PLEKHO1Q53GL0 409 aaPredicted RBP16.47■□□□□ 0.23
SFXN3-201ENST00000224807 RGS22Q8NE09 1264 aa16.47■□□□□ 0.23
SFXN3-201ENST00000224807 KCNG4Q8TDN1 519 aa16.47■□□□□ 0.23
SFXN3-201ENST00000224807 DRC1Q96MC2 740 aa16.47■□□□□ 0.23
SFXN3-201ENST00000224807 ALG1Q9BT22 464 aa16.47■□□□□ 0.23
SFXN3-201ENST00000224807 SAMSN1Q9NSI8 373 aaKnown RBP16.47■□□□□ 0.23
SFXN3-201ENST00000224807 NEURL1BA8MQ27 555 aa16.47■□□□□ 0.23
SFXN3-201ENST00000224807 E2F4Q16254 413 aa16.47■□□□□ 0.23
SFXN3-201ENST00000224807 ESCO1Q5FWF5 840 aa16.47■□□□□ 0.23
SFXN3-201ENST00000224807 SMYD4Q8IYR2 804 aaPredicted RBP16.47■□□□□ 0.23
SFXN3-201ENST00000224807 KDM3BQ7LBC6 1761 aa16.47■□□□□ 0.23
SFXN3-201ENST00000224807 PLEKHG1Q9ULL1 1385 aa16.47■□□□□ 0.23
SFXN3-201ENST00000224807 MARF1Q9Y4F3 1742 aaKnown RBP16.47■□□□□ 0.23
SFXN3-201ENST00000224807 M0R2C6 588 aa16.47■□□□□ 0.23
SFXN3-201ENST00000224807 PTPN12Q05209 780 aaKnown RBP16.47■□□□□ 0.23
SFXN3-201ENST00000224807 LRRC24Q50LG9 513 aa16.47■□□□□ 0.23
SFXN3-201ENST00000224807 DHX37Q8IY37 1157 aaKnown RBP16.47■□□□□ 0.23
SFXN3-201ENST00000224807 MRPL44Q9H9J2 332 aaKnown RBP16.47■□□□□ 0.23
SFXN3-201ENST00000224807 RRP15Q9Y3B9 282 aaKnown RBP16.47■□□□□ 0.23
SFXN3-201ENST00000224807 RNMTO43148 476 aaKnown RBP16.46■□□□□ 0.23
SFXN3-201ENST00000224807 MRPS25P82663 173 aaKnown RBP16.46■□□□□ 0.23
SFXN3-201ENST00000224807 SART3Q15020 963 aaKnown RBP16.46■□□□□ 0.23
SFXN3-201ENST00000224807 CDC5LQ99459 802 aaKnown RBP16.46■□□□□ 0.23
SFXN3-201ENST00000224807 POLD4Q9HCU8 107 aa16.46■□□□□ 0.23
SFXN3-201ENST00000224807 RTEL1Q9NZ71 1219 aa16.46■□□□□ 0.23
SFXN3-201ENST00000224807 HDAC5Q9UQL6 1122 aa16.46■□□□□ 0.23
SFXN3-201ENST00000224807 ATP5JP18859 108 aa16.45■□□□□ 0.22
SFXN3-201ENST00000224807 CHMP4BP1P59074 171 aa16.45■□□□□ 0.22
SFXN3-201ENST00000224807 ANKRD13DQ6ZTN6 518 aa16.45■□□□□ 0.22
SFXN3-201ENST00000224807 KBTBD3Q8NAB2 608 aa16.45■□□□□ 0.22
SFXN3-201ENST00000224807 GOLGA1Q92805 767 aa16.45■□□□□ 0.22
SFXN3-201ENST00000224807 EEF2KMTQ96G04 330 aa16.45■□□□□ 0.22
SFXN3-201ENST00000224807 ZBTB3Q9H5J0 574 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms