RNA–Protein interactions for RNA: ENST00000222345.10

SIPA1L3-201, Transcript of signal induced proliferation associated 1 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1L3, Length 7,987 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-201ENST00000222345 CEP104O60308 925 aa15.37■□□□□ 0.05
SIPA1L3-201ENST00000222345 SLC4A8Q2Y0W8 1093 aa15.37■□□□□ 0.05
SIPA1L3-201ENST00000222345 CAVIN4Q5BKX8 364 aa15.37■□□□□ 0.05
SIPA1L3-201ENST00000222345 RAB17Q9H0T7 212 aa15.37■□□□□ 0.05
SIPA1L3-201ENST00000222345 KLHL14Q9P2G3 628 aa15.37■□□□□ 0.05
SIPA1L3-201ENST00000222345 PPP1R9AQ9ULJ8 1098 aa15.37■□□□□ 0.05
SIPA1L3-201ENST00000222345 HSPA1LP34931 641 aa15.37■□□□□ 0.05
SIPA1L3-201ENST00000222345 MFSD6Q6ZSS7 791 aa15.37■□□□□ 0.05
SIPA1L3-201ENST00000222345 SDSP20132 328 aa15.36■□□□□ 0.05
SIPA1L3-201ENST00000222345 GAS8O95995 478 aa15.36■□□□□ 0.05
SIPA1L3-201ENST00000222345 WDR78Q5VTH9 848 aa15.36■□□□□ 0.05
SIPA1L3-201ENST00000222345 C9orf84Q5VXU9 1444 aa15.36■□□□□ 0.05
SIPA1L3-201ENST00000222345 SLF2Q8IX21 1173 aa15.36■□□□□ 0.05
SIPA1L3-201ENST00000222345 RANBP6O60518 1105 aaKnown RBP15.36■□□□□ 0.05
SIPA1L3-201ENST00000222345 ARL1P40616 181 aaPredicted RBP15.36■□□□□ 0.05
SIPA1L3-201ENST00000222345 GABPB2Q8TAK5 448 aaPredicted RBP15.36■□□□□ 0.05
SIPA1L3-201ENST00000222345 PDE4BQ07343 736 aa15.36■□□□□ 0.05
SIPA1L3-201ENST00000222345 ANKRD36BQ8N2N9 1353 aa15.36■□□□□ 0.05
SIPA1L3-201ENST00000222345 IGHDP01880 384 aa15.35■□□□□ 0.05
SIPA1L3-201ENST00000222345 SATB1Q01826 763 aa15.35■□□□□ 0.05
SIPA1L3-201ENST00000222345 ANKRD20A3Q5VUR7 823 aa15.35■□□□□ 0.05
SIPA1L3-201ENST00000222345 FAM135AQ9P2D6 1515 aa15.35■□□□□ 0.05
SIPA1L3-201ENST00000222345 ARMC9Q7Z3E5 817 aa15.35■□□□□ 0.05
SIPA1L3-201ENST00000222345 SYCE1Q8N0S2 351 aa15.35■□□□□ 0.05
SIPA1L3-201ENST00000222345 JRKLQ9Y4A0 524 aa15.35■□□□□ 0.05
SIPA1L3-201ENST00000222345 ZC4H2Q9NQZ6 224 aa15.35■□□□□ 0.05
SIPA1L3-201ENST00000222345 MICU3Q86XE3 530 aa15.35■□□□□ 0.05
SIPA1L3-201ENST00000222345 IGSF22Q8N9C0 903 aa15.35■□□□□ 0.05
SIPA1L3-201ENST00000222345 HAUS8Q9BT25 410 aa15.35■□□□□ 0.05
SIPA1L3-201ENST00000222345 FAM169AQ9Y6X4 670 aa15.35■□□□□ 0.05
SIPA1L3-201ENST00000222345 CFTRP13569 1480 aa15.35■□□□□ 0.05
SIPA1L3-201ENST00000222345 TROVE2P10155 538 aaKnown RBP eCLIP15.35■□□□□ 0.05
SIPA1L3-201ENST00000222345 LGSNQ5TDP6 509 aa15.35■□□□□ 0.05
SIPA1L3-201ENST00000222345 ZBTB43O43298 467 aa15.34■□□□□ 0.05
SIPA1L3-201ENST00000222345 ZNF530Q6P9A1 599 aaPredicted RBP15.34■□□□□ 0.05
SIPA1L3-201ENST00000222345 HOMER3Q9NSC5 361 aa15.34■□□□□ 0.05
SIPA1L3-201ENST00000222345 ERCC5P28715 1186 aaPredicted RBP15.34■□□□□ 0.05
SIPA1L3-201ENST00000222345 CALML3P27482 149 aa15.34■□□□□ 0.05
SIPA1L3-201ENST00000222345 HHATQ5VTY9 493 aa15.34■□□□□ 0.05
SIPA1L3-201ENST00000222345 SLC5A1P13866 664 aa15.34■□□□□ 0.05
SIPA1L3-201ENST00000222345 DDX21Q9NR30 783 aaKnown RBP eCLIP15.34■□□□□ 0.05
SIPA1L3-201ENST00000222345 A0A087WUV0 522 aaPredicted RBP15.34■□□□□ 0.05
SIPA1L3-201ENST00000222345 PLCB3Q01970 1234 aa15.34■□□□□ 0.05
SIPA1L3-201ENST00000222345 STK38LQ9Y2H1 464 aa15.34■□□□□ 0.05
SIPA1L3-201ENST00000222345 MRPS9P82933 396 aaKnown RBP15.33■□□□□ 0.04
SIPA1L3-201ENST00000222345 DRC3Q9H069 523 aa15.33■□□□□ 0.04
SIPA1L3-201ENST00000222345 EEF2P13639 858 aaKnown RBP15.33■□□□□ 0.04
SIPA1L3-201ENST00000222345 PDCD2Q16342 344 aaPredicted RBP15.33■□□□□ 0.04
SIPA1L3-201ENST00000222345 SECISBP2LQ93073 1101 aaKnown RBP15.33■□□□□ 0.04
SIPA1L3-201ENST00000222345 TRIM75PA6NK02 468 aa15.33■□□□□ 0.04
SIPA1L3-201ENST00000222345 ASIC1P78348 528 aa15.33■□□□□ 0.04
SIPA1L3-201ENST00000222345 CCT6BQ92526 530 aa15.33■□□□□ 0.04
SIPA1L3-201ENST00000222345 TRAF1Q13077 416 aa15.33■□□□□ 0.04
SIPA1L3-201ENST00000222345 SLC12A5Q9H2X9 1139 aa15.33■□□□□ 0.04
SIPA1L3-201ENST00000222345 CENPKQ9BS16 269 aa15.32■□□□□ 0.04
SIPA1L3-201ENST00000222345 SCOCQ9UIL1 159 aa15.32■□□□□ 0.04
SIPA1L3-201ENST00000222345 PPM1FP49593 454 aaPredicted RBP15.32■□□□□ 0.04
SIPA1L3-201ENST00000222345 GNGT1P63211 74 aa15.32■□□□□ 0.04
SIPA1L3-201ENST00000222345 PDCD7Q8N8D1 485 aaKnown RBP15.32■□□□□ 0.04
SIPA1L3-201ENST00000222345 MAK16Q9BXY0 300 aaKnown RBP15.32■□□□□ 0.04
SIPA1L3-201ENST00000222345 KAT14Q9H8E8 782 aa15.32■□□□□ 0.04
SIPA1L3-201ENST00000222345 ABCF2Q9UG63 623 aa15.32■□□□□ 0.04
SIPA1L3-201ENST00000222345 GNAQP50148 359 aa15.32■□□□□ 0.04
SIPA1L3-201ENST00000222345 FCHSD1Q86WN1 690 aa15.32■□□□□ 0.04
SIPA1L3-201ENST00000222345 BCAS4Q8TDM0 211 aa15.32■□□□□ 0.04
SIPA1L3-201ENST00000222345 PRAM1Q96QH2 718 aa15.32■□□□□ 0.04
SIPA1L3-201ENST00000222345 IMPG2Q9BZV3 1241 aa15.32■□□□□ 0.04
SIPA1L3-201ENST00000222345 HSP90AA4PQ58FG1 418 aa15.32■□□□□ 0.04
SIPA1L3-201ENST00000222345 P3H4Q92791 437 aa15.32■□□□□ 0.04
SIPA1L3-201ENST00000222345 CCDC51Q96ER9 411 aa15.32■□□□□ 0.04
SIPA1L3-201ENST00000222345 ITIH3Q06033 890 aa15.32■□□□□ 0.04
SIPA1L3-201ENST00000222345 N4BP2L2Q92802 583 aaPredicted RBP15.32■□□□□ 0.04
SIPA1L3-201ENST00000222345 RNF8O76064 485 aa15.31■□□□□ 0.04
SIPA1L3-201ENST00000222345 HMGB2P26583 209 aaKnown RBP15.31■□□□□ 0.04
SIPA1L3-201ENST00000222345 LIG3P49916 1009 aa15.31■□□□□ 0.04
SIPA1L3-201ENST00000222345 WTAPQ15007 396 aa15.31■□□□□ 0.04
SIPA1L3-201ENST00000222345 RTN1Q16799 776 aa15.31■□□□□ 0.04
SIPA1L3-201ENST00000222345 SRGAP1Q7Z6B7 1085 aa15.31■□□□□ 0.04
SIPA1L3-201ENST00000222345 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.31■□□□□ 0.04
SIPA1L3-201ENST00000222345 IQUBQ8NA54 791 aa15.31■□□□□ 0.04
SIPA1L3-201ENST00000222345 KIFAP3Q92845 792 aa15.31■□□□□ 0.04
SIPA1L3-201ENST00000222345 ATP2A3Q93084 1043 aa15.31■□□□□ 0.04
SIPA1L3-201ENST00000222345 TMEM110-MUSTN1A8MSY1 372 aa15.31■□□□□ 0.04
SIPA1L3-201ENST00000222345 ZNF644Q9H582 1327 aaPredicted RBP15.31■□□□□ 0.04
SIPA1L3-201ENST00000222345 NUCKS1Q9H1E3 243 aaKnown RBP15.31■□□□□ 0.04
SIPA1L3-201ENST00000222345 RILPL1Q5EBL4 403 aa15.31■□□□□ 0.04
SIPA1L3-201ENST00000222345 CCDC82Q8N4S0 544 aa15.31■□□□□ 0.04
SIPA1L3-201ENST00000222345 ZRANB1Q9UGI0 708 aa15.31■□□□□ 0.04
SIPA1L3-201ENST00000222345 MRFAP1L1Q96HT8 127 aa15.31■□□□□ 0.04
SIPA1L3-201ENST00000222345 CDK19Q9BWU1 502 aa15.31■□□□□ 0.04
SIPA1L3-201ENST00000222345 XAB2Q9HCS7 855 aaKnown RBP15.31■□□□□ 0.04
SIPA1L3-201ENST00000222345 EIF2AK4Q9P2K8 1649 aaKnown RBP15.31■□□□□ 0.04
SIPA1L3-201ENST00000222345 PIK3R4Q99570 1358 aa15.31■□□□□ 0.04
SIPA1L3-201ENST00000222345 LARP6Q9BRS8 491 aaKnown RBP15.3■□□□□ 0.04
SIPA1L3-201ENST00000222345 RGS16O15492 202 aaPredicted RBP15.3■□□□□ 0.04
SIPA1L3-201ENST00000222345 MYCNP04198 464 aaPredicted RBP15.3■□□□□ 0.04
SIPA1L3-201ENST00000222345 RPL13P26373 211 aaKnown RBP15.3■□□□□ 0.04
SIPA1L3-201ENST00000222345 ARID5AQ03989 594 aa15.3■□□□□ 0.04
SIPA1L3-201ENST00000222345 CCDC152Q4G0S7 254 aa15.3■□□□□ 0.04
SIPA1L3-201ENST00000222345 CLSTN2Q9H4D0 955 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms