RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 AKAP2Q9Y2D5 859 aa16.81■□□□□ 0.28
UPK1A-201ENST00000222275 SPDYE2BA6NHP3 402 aa16.8■□□□□ 0.28
UPK1A-201ENST00000222275 RAB11FIP3O75154 756 aa16.8■□□□□ 0.28
UPK1A-201ENST00000222275 SPDYE6P0CI01 402 aa16.8■□□□□ 0.28
UPK1A-201ENST00000222275 IRX6P78412 446 aaPredicted RBP16.8■□□□□ 0.28
UPK1A-201ENST00000222275 DLGAP5Q15398 846 aa16.8■□□□□ 0.28
UPK1A-201ENST00000222275 MFSD14BQ5SR56 506 aa16.8■□□□□ 0.28
UPK1A-201ENST00000222275 CSRNP1Q96S65 589 aa16.8■□□□□ 0.28
UPK1A-201ENST00000222275 HDAC9Q9UKV0 1011 aa16.8■□□□□ 0.28
UPK1A-201ENST00000222275 THSD7BQ9C0I4 1608 aa16.8■□□□□ 0.28
UPK1A-201ENST00000222275 CAPN15O75808 1086 aa16.79■□□□□ 0.28
UPK1A-201ENST00000222275 SLC10A3P09131 477 aa16.79■□□□□ 0.28
UPK1A-201ENST00000222275 MMP14P50281 582 aa16.79■□□□□ 0.28
UPK1A-201ENST00000222275 CHAF1AQ13111 956 aaPredicted RBP16.79■□□□□ 0.28
UPK1A-201ENST00000222275 HDAC1Q13547 482 aaPredicted RBP16.79■□□□□ 0.28
UPK1A-201ENST00000222275 PRKG1Q13976 671 aa16.79■□□□□ 0.28
UPK1A-201ENST00000222275 PUM3Q15397 648 aaKnown RBP16.79■□□□□ 0.28
UPK1A-201ENST00000222275 ERICH6BQ5W0A0 696 aa16.79■□□□□ 0.28
UPK1A-201ENST00000222275 RASAL3Q86YV0 1011 aa16.79■□□□□ 0.28
UPK1A-201ENST00000222275 CDAN1Q8IWY9 1227 aa16.79■□□□□ 0.28
UPK1A-201ENST00000222275 SIRT2Q8IXJ6 389 aa16.79■□□□□ 0.28
UPK1A-201ENST00000222275 DEFB129Q9H1M3 183 aa16.79■□□□□ 0.28
UPK1A-201ENST00000222275 PCDHB15Q9Y5E8 787 aa16.79■□□□□ 0.28
UPK1A-201ENST00000222275 IFIT1P09914 478 aaKnown RBP16.78■□□□□ 0.28
UPK1A-201ENST00000222275 NOGQ13253 232 aa16.78■□□□□ 0.28
UPK1A-201ENST00000222275 GPR108Q9NPR9 543 aa16.78■□□□□ 0.28
UPK1A-201ENST00000222275 TTF2Q9UNY4 1162 aaKnown RBP16.78■□□□□ 0.28
UPK1A-201ENST00000222275 SLC5A1P13866 664 aa16.77■□□□□ 0.28
UPK1A-201ENST00000222275 LPIN2Q92539 896 aa16.77■□□□□ 0.28
UPK1A-201ENST00000222275 CCDC102AQ96A19 550 aa16.77■□□□□ 0.28
UPK1A-201ENST00000222275 KIF1BPQ96EK5 621 aa16.77■□□□□ 0.28
UPK1A-201ENST00000222275 DCTPP1Q9H773 170 aa16.77■□□□□ 0.28
UPK1A-201ENST00000222275 ADORA1P30542 326 aa16.76■□□□□ 0.27
UPK1A-201ENST00000222275 ATP2B3Q16720 1220 aa16.76■□□□□ 0.27
UPK1A-201ENST00000222275 CAVIN4Q5BKX8 364 aa16.76■□□□□ 0.27
UPK1A-201ENST00000222275 LDLRAD1Q5T700 205 aa16.76■□□□□ 0.27
UPK1A-201ENST00000222275 NBPF12Q5TAG4 269 aaPredicted RBP16.76■□□□□ 0.27
UPK1A-201ENST00000222275 GCC1Q96CN9 775 aa16.76■□□□□ 0.27
UPK1A-201ENST00000222275 TDRD3Q9H7E2 651 aaKnown RBP16.76■□□□□ 0.27
UPK1A-201ENST00000222275 ZBTB47Q9UFB7 747 aaPredicted RBP16.76■□□□□ 0.27
UPK1A-201ENST00000222275 EXOC6BQ9Y2D4 811 aa16.76■□□□□ 0.27
UPK1A-201ENST00000222275 FKBP1BP68106 108 aa16.75■□□□□ 0.27
UPK1A-201ENST00000222275 TFCP2Q12800 502 aa16.75■□□□□ 0.27
UPK1A-201ENST00000222275 APOBEC3FQ8IUX4 373 aaKnown RBP16.75■□□□□ 0.27
UPK1A-201ENST00000222275 RNF186Q9NXI6 227 aa16.75■□□□□ 0.27
UPK1A-201ENST00000222275 ZNF70Q9UC06 446 aaPredicted RBP16.75■□□□□ 0.27
UPK1A-201ENST00000222275 SSC5DA1L4H1 1573 aa16.75■□□□□ 0.27
UPK1A-201ENST00000222275 CRKP46108 304 aa16.74■□□□□ 0.27
UPK1A-201ENST00000222275 RBM5P52756 815 aaKnown RBP eCLIP16.74■□□□□ 0.27
UPK1A-201ENST00000222275 TIMM10P62072 90 aa16.74■□□□□ 0.27
UPK1A-201ENST00000222275 RASA3Q14644 834 aa16.74■□□□□ 0.27
UPK1A-201ENST00000222275 SPDYE2Q495Y8 402 aa16.74■□□□□ 0.27
UPK1A-201ENST00000222275 VPS37DQ86XT2 251 aa16.74■□□□□ 0.27
UPK1A-201ENST00000222275 CLASRPQ8N2M8 674 aaKnown RBP16.74■□□□□ 0.27
UPK1A-201ENST00000222275 RHPN1Q8TCX5 695 aa16.74■□□□□ 0.27
UPK1A-201ENST00000222275 VEZTQ9HBM0 779 aa16.74■□□□□ 0.27
UPK1A-201ENST00000222275 SERPINA10Q9UK55 444 aa16.74■□□□□ 0.27
UPK1A-201ENST00000222275 CASP8AP2Q9UKL3 1982 aa16.74■□□□□ 0.27
UPK1A-201ENST00000222275 COL1A1P02452 1464 aaPredicted RBP16.73■□□□□ 0.27
UPK1A-201ENST00000222275 TRPA1O75762 1119 aa16.73■□□□□ 0.27
UPK1A-201ENST00000222275 PHKA1P46020 1223 aa16.73■□□□□ 0.27
UPK1A-201ENST00000222275 MKRN3Q13064 507 aaKnown RBP16.73■□□□□ 0.27
UPK1A-201ENST00000222275 TTLL12Q14166 644 aaPredicted RBP16.73■□□□□ 0.27
UPK1A-201ENST00000222275 APOBEC3HQ6NTF7 200 aaKnown RBP16.73■□□□□ 0.27
UPK1A-201ENST00000222275 CLMNQ96JQ2 1002 aa16.73■□□□□ 0.27
UPK1A-201ENST00000222275 TEPSINQ96N21 525 aa16.73■□□□□ 0.27
UPK1A-201ENST00000222275 BEGAINQ9BUH8 593 aa16.73■□□□□ 0.27
UPK1A-201ENST00000222275 LRRCC1Q9C099 1032 aa16.73■□□□□ 0.27
UPK1A-201ENST00000222275 A0A1B0GUL7 405 aa16.72■□□□□ 0.27
UPK1A-201ENST00000222275 USP2O75604 605 aaPredicted RBP16.72■□□□□ 0.27
UPK1A-201ENST00000222275 CACNB3P54284 484 aa16.72■□□□□ 0.27
UPK1A-201ENST00000222275 GNL3LQ9NVN8 582 aaKnown RBP16.72■□□□□ 0.27
UPK1A-201ENST00000222275 ANGEL1Q9UNK9 670 aaKnown RBP16.72■□□□□ 0.27
UPK1A-201ENST00000222275 PAPPA2Q9BXP8 1791 aa16.72■□□□□ 0.27
UPK1A-201ENST00000222275 FRAT2O75474 233 aaPredicted RBP16.71■□□□□ 0.27
UPK1A-201ENST00000222275 TNNI3KQ59H18 835 aa16.71■□□□□ 0.27
UPK1A-201ENST00000222275 GORABQ5T7V8 394 aa16.71■□□□□ 0.27
UPK1A-201ENST00000222275 NEUROD6Q96NK8 337 aa16.71■□□□□ 0.27
UPK1A-201ENST00000222275 R3HDMLQ9H3Y0 253 aa16.71■□□□□ 0.27
UPK1A-201ENST00000222275 FPGT-TNNI3KV9GXZ4 949 aa16.71■□□□□ 0.27
UPK1A-201ENST00000222275 TCP10L2B9ZVM9 353 aa16.7■□□□□ 0.26
UPK1A-201ENST00000222275 ZBTB22O15209 634 aa16.7■□□□□ 0.26
UPK1A-201ENST00000222275 GJA5P36382 358 aa16.7■□□□□ 0.26
UPK1A-201ENST00000222275 MAP3K11Q16584 847 aa16.7■□□□□ 0.26
UPK1A-201ENST00000222275 TMEM39BQ9GZU3 492 aa16.7■□□□□ 0.26
UPK1A-201ENST00000222275 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.7■□□□□ 0.26
UPK1A-201ENST00000222275 APBB1O00213 710 aa16.69■□□□□ 0.26
UPK1A-201ENST00000222275 SEMA3EO15041 775 aa16.69■□□□□ 0.26
UPK1A-201ENST00000222275 CA12O43570 354 aa16.69■□□□□ 0.26
UPK1A-201ENST00000222275 HDLBPQ00341 1268 aaKnown RBP16.69■□□□□ 0.26
UPK1A-201ENST00000222275 CCDC158Q5M9N0 1113 aa16.69■□□□□ 0.26
UPK1A-201ENST00000222275 TBC1D22AQ8WUA7 517 aa16.69■□□□□ 0.26
UPK1A-201ENST00000222275 MRIQ9BWK5 157 aa16.69■□□□□ 0.26
UPK1A-201ENST00000222275 MYO1BO43795 1136 aa16.68■□□□□ 0.26
UPK1A-201ENST00000222275 IFIT2P09913 472 aaKnown RBP16.68■□□□□ 0.26
UPK1A-201ENST00000222275 PRDX5P30044 214 aa16.68■□□□□ 0.26
UPK1A-201ENST00000222275 TM4SF4P48230 202 aa16.68■□□□□ 0.26
UPK1A-201ENST00000222275 DIXDC1Q155Q3 683 aa16.68■□□□□ 0.26
UPK1A-201ENST00000222275 SPRYD7Q5W111 196 aa16.68■□□□□ 0.26
UPK1A-201ENST00000222275 CCDC102BQ68D86 513 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms