RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 GPR25O00155 361 aa18.78■□□□□ 0.6
UPK3A-201ENST00000216211 TNRC18O15417 2968 aaPredicted RBP18.78■□□□□ 0.6
UPK3A-201ENST00000216211 USP2O75604 605 aaPredicted RBP18.78■□□□□ 0.6
UPK3A-201ENST00000216211 IREB2P48200 963 aaKnown RBP18.78■□□□□ 0.6
UPK3A-201ENST00000216211 TNFAIP1Q13829 316 aa18.78■□□□□ 0.6
UPK3A-201ENST00000216211 R3HDMLQ9H3Y0 253 aa18.78■□□□□ 0.6
UPK3A-201ENST00000216211 EYA2O00167 538 aa18.77■□□□□ 0.6
UPK3A-201ENST00000216211 ZBTB48P10074 688 aaPredicted RBP18.77■□□□□ 0.6
UPK3A-201ENST00000216211 FGFR2P21802 821 aa18.77■□□□□ 0.6
UPK3A-201ENST00000216211 PUM3Q15397 648 aaKnown RBP18.77■□□□□ 0.6
UPK3A-201ENST00000216211 CDAN1Q8IWY9 1227 aa18.77■□□□□ 0.6
UPK3A-201ENST00000216211 TBC1D22AQ8WUA7 517 aa18.77■□□□□ 0.6
UPK3A-201ENST00000216211 NOB1Q9ULX3 412 aaKnown RBP18.77■□□□□ 0.6
UPK3A-201ENST00000216211 MANSC4A6NHS7 340 aaPredicted RBP18.76■□□□□ 0.59
UPK3A-201ENST00000216211 IFIT1P09914 478 aaKnown RBP18.76■□□□□ 0.59
UPK3A-201ENST00000216211 CFHR5Q9BXR6 569 aa18.76■□□□□ 0.59
UPK3A-201ENST00000216211 UNCXA6NJT0 531 aa18.75■□□□□ 0.59
UPK3A-201ENST00000216211 CT47B1P0C2W7 299 aaPredicted RBP18.75■□□□□ 0.59
UPK3A-201ENST00000216211 UBTFL1P0CB47 393 aaPredicted RBP18.75■□□□□ 0.59
UPK3A-201ENST00000216211 GJA5P36382 358 aa18.75■□□□□ 0.59
UPK3A-201ENST00000216211 SOX10P56693 466 aa18.75■□□□□ 0.59
UPK3A-201ENST00000216211 NOM1Q5C9Z4 860 aaKnown RBP18.75■□□□□ 0.59
UPK3A-201ENST00000216211 IFNL1Q8IU54 200 aa18.75■□□□□ 0.59
UPK3A-201ENST00000216211 ANKRD13AQ8IZ07 590 aa18.75■□□□□ 0.59
UPK3A-201ENST00000216211 TEPSINQ96N21 525 aa18.75■□□□□ 0.59
UPK3A-201ENST00000216211 TMEM39BQ9GZU3 492 aa18.75■□□□□ 0.59
UPK3A-201ENST00000216211 KIF16BQ96L93 1317 aa18.74■□□□□ 0.59
UPK3A-201ENST00000216211 ALDH1A1P00352 501 aa18.74■□□□□ 0.59
UPK3A-201ENST00000216211 SLC5A1P13866 664 aa18.74■□□□□ 0.59
UPK3A-201ENST00000216211 TNNI2P48788 182 aa18.74■□□□□ 0.59
UPK3A-201ENST00000216211 CACNB3P54284 484 aa18.74■□□□□ 0.59
UPK3A-201ENST00000216211 INHBEP58166 350 aa18.74■□□□□ 0.59
UPK3A-201ENST00000216211 ATG9AQ7Z3C6 839 aa18.74■□□□□ 0.59
UPK3A-201ENST00000216211 TEKT1Q969V4 418 aa18.74■□□□□ 0.59
UPK3A-201ENST00000216211 SIL1Q9H173 461 aa18.74■□□□□ 0.59
UPK3A-201ENST00000216211 ELP3Q9H9T3 547 aa18.74■□□□□ 0.59
UPK3A-201ENST00000216211 AK9Q5TCS8 1911 aa18.73■□□□□ 0.59
UPK3A-201ENST00000216211 IGF2BP3O00425 579 aaKnown RBP eCLIP18.73■□□□□ 0.59
UPK3A-201ENST00000216211 FKTNO75072 461 aa18.73■□□□□ 0.59
UPK3A-201ENST00000216211 HDLBPQ00341 1268 aaKnown RBP18.73■□□□□ 0.59
UPK3A-201ENST00000216211 LPIN2Q92539 896 aa18.73■□□□□ 0.59
UPK3A-201ENST00000216211 API5Q9BZZ5 524 aaKnown RBP18.73■□□□□ 0.59
UPK3A-201ENST00000216211 HPS5Q9UPZ3 1129 aa18.73■□□□□ 0.59
UPK3A-201ENST00000216211 PKN2Q16513 984 aaKnown RBP18.72■□□□□ 0.59
UPK3A-201ENST00000216211 LRRFIP2Q9Y608 721 aaKnown RBP18.72■□□□□ 0.59
UPK3A-201ENST00000216211 MAST3O60307 1309 aa18.72■□□□□ 0.59
UPK3A-201ENST00000216211 OPTNQ96CV9 577 aa18.71■□□□□ 0.59
UPK3A-201ENST00000216211 ZDHHC15Q96MV8 337 aa18.71■□□□□ 0.59
UPK3A-201ENST00000216211 CIAO1O76071 339 aa18.7■□□□□ 0.58
UPK3A-201ENST00000216211 RARSP54136 660 aaKnown RBP18.7■□□□□ 0.58
UPK3A-201ENST00000216211 ATP2B3Q16720 1220 aa18.7■□□□□ 0.58
UPK3A-201ENST00000216211 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.7■□□□□ 0.58
UPK3A-201ENST00000216211 MEIS3Q99687 375 aa18.7■□□□□ 0.58
UPK3A-201ENST00000216211 MRIQ9BWK5 157 aa18.7■□□□□ 0.58
UPK3A-201ENST00000216211 CEP126Q9P2H0 1117 aa18.7■□□□□ 0.58
UPK3A-201ENST00000216211 PA2G4Q9UQ80 394 aaKnown RBP18.7■□□□□ 0.58
UPK3A-201ENST00000216211 SUGT1Q9Y2Z0 365 aa18.7■□□□□ 0.58
UPK3A-201ENST00000216211 MYH2Q9UKX2 1941 aa18.69■□□□□ 0.58
UPK3A-201ENST00000216211 VGLL4Q14135 290 aa18.69■□□□□ 0.58
UPK3A-201ENST00000216211 APOBEC3HQ6NTF7 200 aaKnown RBP18.69■□□□□ 0.58
UPK3A-201ENST00000216211 WDR66Q8TBY9 1149 aa18.69■□□□□ 0.58
UPK3A-201ENST00000216211 CNKSR2Q8WXI2 1034 aa18.69■□□□□ 0.58
UPK3A-201ENST00000216211 PTPN18Q99952 460 aa18.69■□□□□ 0.58
UPK3A-201ENST00000216211 TMOD2Q9NZR1 351 aa18.69■□□□□ 0.58
UPK3A-201ENST00000216211 FBXO3Q9UK99 471 aa18.69■□□□□ 0.58
UPK3A-201ENST00000216211 MAP3K9P80192 1104 aa18.68■□□□□ 0.58
UPK3A-201ENST00000216211 OTUD7BQ6GQQ9 843 aa18.68■□□□□ 0.58
UPK3A-201ENST00000216211 FBXO46Q6PJ61 603 aaPredicted RBP18.68■□□□□ 0.58
UPK3A-201ENST00000216211 HHIPL2Q6UWX4 724 aa18.68■□□□□ 0.58
UPK3A-201ENST00000216211 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.68■□□□□ 0.58
UPK3A-201ENST00000216211 TESPA1A2RU30 521 aaPredicted RBP18.67■□□□□ 0.58
UPK3A-201ENST00000216211 FAM83AQ86UY5 434 aa18.67■□□□□ 0.58
UPK3A-201ENST00000216211 HDAC5Q9UQL6 1122 aa18.67■□□□□ 0.58
UPK3A-201ENST00000216211 CSADQ9Y600 493 aa18.67■□□□□ 0.58
UPK3A-201ENST00000216211 CENPBP07199 599 aaPredicted RBP18.66■□□□□ 0.58
UPK3A-201ENST00000216211 PRDX5P30044 214 aa18.66■□□□□ 0.58
UPK3A-201ENST00000216211 IL15P40933 162 aaPredicted RBP18.66■□□□□ 0.58
UPK3A-201ENST00000216211 CRHR2Q13324 411 aa18.66■□□□□ 0.58
UPK3A-201ENST00000216211 MS4A4AQ96JQ5 239 aa18.66■□□□□ 0.58
UPK3A-201ENST00000216211 PHKA1P46020 1223 aa18.65■□□□□ 0.58
UPK3A-201ENST00000216211 DIXDC1Q155Q3 683 aa18.65■□□□□ 0.58
UPK3A-201ENST00000216211 FKBP1CQ5VVH2 108 aa18.65■□□□□ 0.58
UPK3A-201ENST00000216211 INTS3Q68E01 1043 aaKnown RBP18.65■□□□□ 0.58
UPK3A-201ENST00000216211 ARHGAP45Q92619 1136 aa18.65■□□□□ 0.58
UPK3A-201ENST00000216211 OTUD5Q96G74 571 aa18.65■□□□□ 0.58
UPK3A-201ENST00000216211 COPRSQ9NQ92 184 aa18.65■□□□□ 0.58
UPK3A-201ENST00000216211 GNL3LQ9NVN8 582 aaKnown RBP18.65■□□□□ 0.58
UPK3A-201ENST00000216211 TRIM17Q9Y577 477 aa18.65■□□□□ 0.58
UPK3A-201ENST00000216211 ADORA1P30542 326 aa18.64■□□□□ 0.57
UPK3A-201ENST00000216211 CD99L2Q8TCZ2 262 aa18.64■□□□□ 0.57
UPK3A-201ENST00000216211 BRI3BPQ8WY22 251 aa18.64■□□□□ 0.57
UPK3A-201ENST00000216211 ZKSCAN4Q969J2 545 aaPredicted RBP18.64■□□□□ 0.57
UPK3A-201ENST00000216211 WRNIP1Q96S55 665 aa18.64■□□□□ 0.57
UPK3A-201ENST00000216211 TNNQ9UQP3 1299 aa18.64■□□□□ 0.57
UPK3A-201ENST00000216211 DAGLAQ9Y4D2 1042 aa18.64■□□□□ 0.57
UPK3A-201ENST00000216211 SNCAIPQ9Y6H5 919 aa18.64■□□□□ 0.57
UPK3A-201ENST00000216211 DOCK2Q92608 1830 aa18.64■□□□□ 0.57
UPK3A-201ENST00000216211 RPAP1Q9BWH6 1393 aaPredicted RBP18.64■□□□□ 0.57
UPK3A-201ENST00000216211 HTTP42858 3142 aa18.63■□□□□ 0.57
UPK3A-201ENST00000216211 CCL15-CCL14A0A0B4J2E2 113 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms