RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 DMTNQ08495 405 aa17.5■□□□□ 0.39
EFNB1-201ENST00000204961 NCBP1Q09161 790 aaKnown RBP17.5■□□□□ 0.39
EFNB1-201ENST00000204961 HELLSQ9NRZ9 838 aa17.5■□□□□ 0.39
EFNB1-201ENST00000204961 ZNF532Q9HCE3 1301 aa17.5■□□□□ 0.39
EFNB1-201ENST00000204961 MYSM1Q5VVJ2 828 aa17.5■□□□□ 0.39
EFNB1-201ENST00000204961 ZNF771Q7L3S4 317 aaPredicted RBP17.5■□□□□ 0.39
EFNB1-201ENST00000204961 SEC31BQ9NQW1 1179 aa17.5■□□□□ 0.39
EFNB1-201ENST00000204961 CACNA1FO60840 1977 aa17.5■□□□□ 0.39
EFNB1-201ENST00000204961 HEG1Q9ULI3 1381 aa17.49■□□□□ 0.39
EFNB1-201ENST00000204961 ERICH4A6NGS2 130 aa17.49■□□□□ 0.39
EFNB1-201ENST00000204961 IFIT3O14879 490 aaKnown RBP17.49■□□□□ 0.39
EFNB1-201ENST00000204961 PFKFB1P16118 471 aa17.49■□□□□ 0.39
EFNB1-201ENST00000204961 MAGEB6Q8N7X4 407 aa17.49■□□□□ 0.39
EFNB1-201ENST00000204961 SMARCC2Q8TAQ2 1214 aa17.49■□□□□ 0.39
EFNB1-201ENST00000204961 DPF2Q92785 391 aa17.49■□□□□ 0.39
EFNB1-201ENST00000204961 ARHGAP23Q9P227 1491 aa17.49■□□□□ 0.39
EFNB1-201ENST00000204961 HMGB1P09429 215 aaKnown RBP17.49■□□□□ 0.39
EFNB1-201ENST00000204961 STX17P56962 302 aa17.49■□□□□ 0.39
EFNB1-201ENST00000204961 TMEM67Q5HYA8 995 aa17.49■□□□□ 0.39
EFNB1-201ENST00000204961 NFAT5O94916 1531 aa17.49■□□□□ 0.39
EFNB1-201ENST00000204961 GRIN1Q05586 938 aa17.49■□□□□ 0.39
EFNB1-201ENST00000204961 TRERF1Q96PN7 1200 aa17.49■□□□□ 0.39
EFNB1-201ENST00000204961 CDK11BP21127 795 aaKnown RBP17.48■□□□□ 0.39
EFNB1-201ENST00000204961 GUCY1A2P33402 732 aa17.48■□□□□ 0.39
EFNB1-201ENST00000204961 LINC00301Q8NCQ3 95 aa17.48■□□□□ 0.39
EFNB1-201ENST00000204961 RGPD5Q99666 1765 aa17.48■□□□□ 0.39
EFNB1-201ENST00000204961 IRS4O14654 1257 aaPredicted RBP17.48■□□□□ 0.39
EFNB1-201ENST00000204961 DSCC1Q9BVC3 393 aa17.48■□□□□ 0.39
EFNB1-201ENST00000204961 ZBTB1Q9Y2K1 713 aa17.48■□□□□ 0.39
EFNB1-201ENST00000204961 GOLGA8AA7E2F4 631 aa17.47■□□□□ 0.39
EFNB1-201ENST00000204961 FOXP2O15409 715 aa17.47■□□□□ 0.39
EFNB1-201ENST00000204961 SYKP43405 635 aa17.47■□□□□ 0.39
EFNB1-201ENST00000204961 KRT40Q6A162 431 aa17.47■□□□□ 0.39
EFNB1-201ENST00000204961 VPS37DQ86XT2 251 aa17.47■□□□□ 0.39
EFNB1-201ENST00000204961 GPIHBP1Q8IV16 184 aa17.47■□□□□ 0.39
EFNB1-201ENST00000204961 CYP2D7A0A087X1C5 515 aa17.47■□□□□ 0.39
EFNB1-201ENST00000204961 BTBD18B2RXH4 712 aa17.47■□□□□ 0.39
EFNB1-201ENST00000204961 TMEM232C9JQI7 657 aa17.47■□□□□ 0.39
EFNB1-201ENST00000204961 MBD4O95243 580 aa17.47■□□□□ 0.39
EFNB1-201ENST00000204961 TDO2P48775 406 aa17.47■□□□□ 0.39
EFNB1-201ENST00000204961 FBXO18Q8NFZ0 1043 aa17.47■□□□□ 0.39
EFNB1-201ENST00000204961 PALLDQ8WX93 1383 aa17.47■□□□□ 0.39
EFNB1-201ENST00000204961 TCIRG1Q13488 830 aa17.47■□□□□ 0.39
EFNB1-201ENST00000204961 ANO1Q5XXA6 986 aa17.47■□□□□ 0.39
EFNB1-201ENST00000204961 CCDC191Q8NCU4 936 aa17.47■□□□□ 0.39
EFNB1-201ENST00000204961 KIAA1468Q9P260 1216 aa17.47■□□□□ 0.39
EFNB1-201ENST00000204961 DNAI1Q9UI46 699 aa17.47■□□□□ 0.39
EFNB1-201ENST00000204961 HPS5Q9UPZ3 1129 aa17.47■□□□□ 0.39
EFNB1-201ENST00000204961 IL2RBP14784 551 aa17.46■□□□□ 0.39
EFNB1-201ENST00000204961 AFMP43652 599 aa17.46■□□□□ 0.39
EFNB1-201ENST00000204961 TRIM29Q14134 588 aa17.46■□□□□ 0.39
EFNB1-201ENST00000204961 ERCC6LQ2NKX8 1250 aa17.46■□□□□ 0.39
EFNB1-201ENST00000204961 PIGBQ92521 554 aa17.46■□□□□ 0.39
EFNB1-201ENST00000204961 SFPQP23246 707 aaKnown RBP eCLIP17.46■□□□□ 0.39
EFNB1-201ENST00000204961 NR5A1Q13285 461 aa17.46■□□□□ 0.39
EFNB1-201ENST00000204961 TSGA10IPQ3SY00 556 aa17.46■□□□□ 0.39
EFNB1-201ENST00000204961 SDR42E1Q8WUS8 393 aa17.46■□□□□ 0.39
EFNB1-201ENST00000204961 EEF2KMTQ96G04 330 aa17.46■□□□□ 0.39
EFNB1-201ENST00000204961 UTP14AQ9BVJ6 771 aaKnown RBP17.46■□□□□ 0.39
EFNB1-201ENST00000204961 NAPBQ9H115 298 aa17.46■□□□□ 0.39
EFNB1-201ENST00000204961 MROH7-TTC4A0A0A0MT08 1334 aa17.46■□□□□ 0.39
EFNB1-201ENST00000204961 TPM3P06753 285 aa17.46■□□□□ 0.38
EFNB1-201ENST00000204961 BCAMP50895 628 aa17.46■□□□□ 0.38
EFNB1-201ENST00000204961 NAA16Q6N069 864 aaPredicted RBP17.46■□□□□ 0.38
EFNB1-201ENST00000204961 FMR1NBQ8N0W7 255 aaPredicted RBP17.46■□□□□ 0.38
EFNB1-201ENST00000204961 CTNNA3Q9UI47 895 aa17.46■□□□□ 0.38
EFNB1-201ENST00000204961 SLIT1O75093 1534 aa17.45■□□□□ 0.38
EFNB1-201ENST00000204961 IARSP41252 1262 aaKnown RBP17.45■□□□□ 0.38
EFNB1-201ENST00000204961 NAT10Q9H0A0 1025 aaKnown RBP17.45■□□□□ 0.38
EFNB1-201ENST00000204961 SH3TC1Q8TE82 1336 aa17.45■□□□□ 0.38
EFNB1-201ENST00000204961 ADAMTS2O95450 1211 aa17.45■□□□□ 0.38
EFNB1-201ENST00000204961 ENGASEQ8NFI3 743 aa17.45■□□□□ 0.38
EFNB1-201ENST00000204961 BTG4Q9NY30 223 aa17.45■□□□□ 0.38
EFNB1-201ENST00000204961 CNNM3Q8NE01 707 aa17.44■□□□□ 0.38
EFNB1-201ENST00000204961 APPBP2Q92624 585 aa17.44■□□□□ 0.38
EFNB1-201ENST00000204961 MPHOSPH8Q99549 860 aa17.44■□□□□ 0.38
EFNB1-201ENST00000204961 CGNQ9P2M7 1197 aaKnown RBP17.44■□□□□ 0.38
EFNB1-201ENST00000204961 TUBGCP6Q96RT7 1819 aa17.44■□□□□ 0.38
EFNB1-201ENST00000204961 NEDD4P46934 1319 aa17.44■□□□□ 0.38
EFNB1-201ENST00000204961 C1orf167Q5SNV9 1468 aa17.44■□□□□ 0.38
EFNB1-201ENST00000204961 FAM205CA6NFA0 338 aa17.44■□□□□ 0.38
EFNB1-201ENST00000204961 URI1O94763 535 aaPredicted RBP17.44■□□□□ 0.38
EFNB1-201ENST00000204961 USP49Q70CQ1 688 aa17.44■□□□□ 0.38
EFNB1-201ENST00000204961 LRP2BPQ9P2M1 347 aa17.44■□□□□ 0.38
EFNB1-201ENST00000204961 ANKRD18BA2A2Z9 1011 aa17.44■□□□□ 0.38
EFNB1-201ENST00000204961 ZBTB43O43298 467 aa17.44■□□□□ 0.38
EFNB1-201ENST00000204961 UBASH3AP57075 661 aa17.44■□□□□ 0.38
EFNB1-201ENST00000204961 CCDC102BQ68D86 513 aa17.44■□□□□ 0.38
EFNB1-201ENST00000204961 FANCLQ9NW38 375 aa17.44■□□□□ 0.38
EFNB1-201ENST00000204961 PES1O00541 588 aaKnown RBP17.43■□□□□ 0.38
EFNB1-201ENST00000204961 ADKP55263 362 aaKnown RBP17.43■□□□□ 0.38
EFNB1-201ENST00000204961 LONRF3Q496Y0 759 aa17.43■□□□□ 0.38
EFNB1-201ENST00000204961 ADALQ6DHV7 355 aa17.43■□□□□ 0.38
EFNB1-201ENST00000204961 SMYD4Q8IYR2 804 aaPredicted RBP17.43■□□□□ 0.38
EFNB1-201ENST00000204961 DESI2Q9BSY9 194 aa17.43■□□□□ 0.38
EFNB1-201ENST00000204961 SLC12A7Q9Y666 1083 aa17.43■□□□□ 0.38
EFNB1-201ENST00000204961 LRRC37A3O60309 1634 aa17.43■□□□□ 0.38
EFNB1-201ENST00000204961 KIF23Q02241 960 aaPredicted RBP17.43■□□□□ 0.38
EFNB1-201ENST00000204961 AKAP2Q9Y2D5 859 aa17.43■□□□□ 0.38
EFNB1-201ENST00000204961 DHX16O60231 1041 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms