RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 MCM6Q14566 821 aa19.72■□□□□ 0.75
PTPN18-201ENST00000175756 DESI2Q9BSY9 194 aa19.72■□□□□ 0.75
PTPN18-201ENST00000175756 PUF60Q9UHX1 559 aaKnown RBP19.72■□□□□ 0.75
PTPN18-201ENST00000175756 TULP1O00294 542 aaPredicted RBP19.72■□□□□ 0.75
PTPN18-201ENST00000175756 VPS37DQ86XT2 251 aa19.72■□□□□ 0.75
PTPN18-201ENST00000175756 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.72■□□□□ 0.75
PTPN18-201ENST00000175756 PTPRUQ92729 1446 aa19.71■□□□□ 0.75
PTPN18-201ENST00000175756 KIF4BQ2VIQ3 1234 aa19.71■□□□□ 0.75
PTPN18-201ENST00000175756 ZNF274Q96GC6 653 aaPredicted RBP19.71■□□□□ 0.75
PTPN18-201ENST00000175756 ABCF2Q9UG63 623 aa19.71■□□□□ 0.75
PTPN18-201ENST00000175756 ZNF609O15014 1411 aa19.71■□□□□ 0.75
PTPN18-201ENST00000175756 SEC31AO94979 1220 aaKnown RBP19.71■□□□□ 0.75
PTPN18-201ENST00000175756 SART3Q15020 963 aaKnown RBP19.71■□□□□ 0.75
PTPN18-201ENST00000175756 KRT40Q6A162 431 aa19.71■□□□□ 0.75
PTPN18-201ENST00000175756 PCMTD1Q96MG8 357 aaPredicted RBP19.71■□□□□ 0.75
PTPN18-201ENST00000175756 SSRP1Q08945 709 aaKnown RBP19.71■□□□□ 0.75
PTPN18-201ENST00000175756 ZMYM1Q5SVZ6 1142 aa19.7■□□□□ 0.74
PTPN18-201ENST00000175756 BRAPQ7Z569 592 aa19.7■□□□□ 0.74
PTPN18-201ENST00000175756 KCNB2Q92953 911 aa19.7■□□□□ 0.74
PTPN18-201ENST00000175756 PHKG2P15735 406 aa19.7■□□□□ 0.74
PTPN18-201ENST00000175756 GABPB1Q06547 395 aaPredicted RBP19.7■□□□□ 0.74
PTPN18-201ENST00000175756 ATL3Q6DD88 541 aa19.7■□□□□ 0.74
PTPN18-201ENST00000175756 RTEL1Q9NZ71 1219 aa19.7■□□□□ 0.74
PTPN18-201ENST00000175756 KCNJ14Q9UNX9 436 aa19.7■□□□□ 0.74
PTPN18-201ENST00000175756 CDC25BP30305 580 aa19.7■□□□□ 0.74
PTPN18-201ENST00000175756 CCZ1BP86790 482 aa19.7■□□□□ 0.74
PTPN18-201ENST00000175756 CCZ1P86791 482 aaPredicted RBP19.7■□□□□ 0.74
PTPN18-201ENST00000175756 SMARCE1Q969G3 411 aa19.7■□□□□ 0.74
PTPN18-201ENST00000175756 MED23Q9ULK4 1368 aa19.69■□□□□ 0.74
PTPN18-201ENST00000175756 FMR1NBQ8N0W7 255 aaPredicted RBP19.69■□□□□ 0.74
PTPN18-201ENST00000175756 ETF1P62495 437 aaKnown RBP19.69■□□□□ 0.74
PTPN18-201ENST00000175756 GOLGA6L1Q8N7Z2 621 aa19.69■□□□□ 0.74
PTPN18-201ENST00000175756 KCNH3Q9ULD8 1083 aa19.69■□□□□ 0.74
PTPN18-201ENST00000175756 hCG_1642624A0A1W2PR95 340 aa19.69■□□□□ 0.74
PTPN18-201ENST00000175756 ZBTB22O15209 634 aa19.69■□□□□ 0.74
PTPN18-201ENST00000175756 BBXQ8WY36 941 aaPredicted RBP19.69■□□□□ 0.74
PTPN18-201ENST00000175756 DCAF5Q96JK2 942 aa19.69■□□□□ 0.74
PTPN18-201ENST00000175756 TIGD1Q96MW7 591 aa19.69■□□□□ 0.74
PTPN18-201ENST00000175756 INCENPQ9NQS7 918 aa19.69■□□□□ 0.74
PTPN18-201ENST00000175756 CEMIPQ8WUJ3 1361 aa19.69■□□□□ 0.74
PTPN18-201ENST00000175756 POLR2DO15514 142 aaKnown RBP19.68■□□□□ 0.74
PTPN18-201ENST00000175756 PDIA6Q15084 440 aa19.68■□□□□ 0.74
PTPN18-201ENST00000175756 SARM1Q6SZW1 724 aa19.68■□□□□ 0.74
PTPN18-201ENST00000175756 SMARCC2Q8TAQ2 1214 aa19.68■□□□□ 0.74
PTPN18-201ENST00000175756 BAG1Q99933 345 aaPredicted RBP19.68■□□□□ 0.74
PTPN18-201ENST00000175756 PUS7LQ9H0K6 701 aaKnown RBP19.68■□□□□ 0.74
PTPN18-201ENST00000175756 IMPACTQ9P2X3 320 aa19.68■□□□□ 0.74
PTPN18-201ENST00000175756 LMAN1P49257 510 aa19.68■□□□□ 0.74
PTPN18-201ENST00000175756 FILIP1LQ4L180 1135 aa19.68■□□□□ 0.74
PTPN18-201ENST00000175756 STAMQ92783 540 aa19.68■□□□□ 0.74
PTPN18-201ENST00000175756 CCDC102AQ96A19 550 aa19.68■□□□□ 0.74
PTPN18-201ENST00000175756 TSR1Q2NL82 804 aaKnown RBP19.67■□□□□ 0.74
PTPN18-201ENST00000175756 ARMCX5Q6P1M9 558 aa19.67■□□□□ 0.74
PTPN18-201ENST00000175756 DHX58Q96C10 678 aa19.67■□□□□ 0.74
PTPN18-201ENST00000175756 UBAC1Q9BSL1 405 aa19.67■□□□□ 0.74
PTPN18-201ENST00000175756 NFE2L3Q9Y4A8 694 aa19.67■□□□□ 0.74
PTPN18-201ENST00000175756 VGLL3A8MV65 326 aa19.67■□□□□ 0.74
PTPN18-201ENST00000175756 HSP90B2PQ58FF3 399 aa19.67■□□□□ 0.74
PTPN18-201ENST00000175756 LRP2BPQ9P2M1 347 aa19.67■□□□□ 0.74
PTPN18-201ENST00000175756 TRMT112Q9UI30 125 aaKnown RBP19.67■□□□□ 0.74
PTPN18-201ENST00000175756 COBLO75128 1261 aa19.67■□□□□ 0.74
PTPN18-201ENST00000175756 PHACTR2O75167 634 aa19.67■□□□□ 0.74
PTPN18-201ENST00000175756 YEATS4O95619 227 aa19.67■□□□□ 0.74
PTPN18-201ENST00000175756 E4F1Q66K89 784 aaPredicted RBP19.67■□□□□ 0.74
PTPN18-201ENST00000175756 PCDHA5Q9Y5H7 936 aa19.67■□□□□ 0.74
PTPN18-201ENST00000175756 USPL1Q5W0Q7 1092 aa19.66■□□□□ 0.74
PTPN18-201ENST00000175756 GRAMD1CQ8IYS0 662 aa19.66■□□□□ 0.74
PTPN18-201ENST00000175756 IL17RAQ96F46 866 aa19.66■□□□□ 0.74
PTPN18-201ENST00000175756 ANGEL1Q9UNK9 670 aaKnown RBP19.66■□□□□ 0.74
PTPN18-201ENST00000175756 TMEM232C9JQI7 657 aa19.66■□□□□ 0.74
PTPN18-201ENST00000175756 SLC4A8Q2Y0W8 1093 aa19.66■□□□□ 0.74
PTPN18-201ENST00000175756 TSGA10IPQ3SY00 556 aa19.66■□□□□ 0.74
PTPN18-201ENST00000175756 ARFGAP3Q9NP61 516 aa19.66■□□□□ 0.74
PTPN18-201ENST00000175756 ITSN1Q15811 1721 aa19.66■□□□□ 0.74
PTPN18-201ENST00000175756 ZFYP08048 801 aaPredicted RBP19.66■□□□□ 0.74
PTPN18-201ENST00000175756 CLCN6P51797 869 aa19.66■□□□□ 0.74
PTPN18-201ENST00000175756 CTDSPL2Q05D32 466 aa19.66■□□□□ 0.74
PTPN18-201ENST00000175756 MPHOSPH8Q99549 860 aa19.66■□□□□ 0.74
PTPN18-201ENST00000175756 CALCOCO1Q9P1Z2 691 aa19.66■□□□□ 0.74
PTPN18-201ENST00000175756 NEK11Q8NG66 645 aa19.65■□□□□ 0.74
PTPN18-201ENST00000175756 APPBP2Q92624 585 aa19.65■□□□□ 0.74
PTPN18-201ENST00000175756 MIGA1Q8NAN2 632 aa19.65■□□□□ 0.74
PTPN18-201ENST00000175756 DPF2Q92785 391 aa19.65■□□□□ 0.74
PTPN18-201ENST00000175756 DACH1Q9UI36 760 aa19.65■□□□□ 0.74
PTPN18-201ENST00000175756 TERF2Q15554 542 aa19.65■□□□□ 0.74
PTPN18-201ENST00000175756 KIF28PB7ZC32 967 aa19.64■□□□□ 0.74
PTPN18-201ENST00000175756 FDPSP14324 419 aaKnown RBP19.64■□□□□ 0.74
PTPN18-201ENST00000175756 DHX8Q14562 1220 aaKnown RBP19.64■□□□□ 0.74
PTPN18-201ENST00000175756 LRRN4CLQ8ND94 238 aa19.64■□□□□ 0.74
PTPN18-201ENST00000175756 ANKRD20A12PQ8NF67 263 aa19.64■□□□□ 0.74
PTPN18-201ENST00000175756 BTBD18B2RXH4 712 aa19.64■□□□□ 0.73
PTPN18-201ENST00000175756 TECPR2O15040 1411 aa19.64■□□□□ 0.73
PTPN18-201ENST00000175756 CMA1P23946 247 aa19.64■□□□□ 0.73
PTPN18-201ENST00000175756 GTF2E1P29083 439 aaPredicted RBP19.64■□□□□ 0.73
PTPN18-201ENST00000175756 FAM193AP78312 1265 aa19.64■□□□□ 0.73
PTPN18-201ENST00000175756 TAF3Q5VWG9 929 aa19.64■□□□□ 0.73
PTPN18-201ENST00000175756 ZCCHC17Q9NP64 241 aaKnown RBP19.64■□□□□ 0.73
PTPN18-201ENST00000175756 PXDNLA1KZ92 1463 aa19.64■□□□□ 0.73
PTPN18-201ENST00000175756 KIF5CO60282 957 aa19.64■□□□□ 0.73
PTPN18-201ENST00000175756 RHOXF2BP0C7M4 288 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms