RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.12■■□□□ 1.29
PPP1R3F-201ENST00000055335 CNNM3Q8NE01 707 aa23.12■■□□□ 1.29
PPP1R3F-201ENST00000055335 RSPH14Q9UHP6 348 aa23.12■■□□□ 1.29
PPP1R3F-201ENST00000055335 ADAMTS13Q76LX8 1427 aa23.12■■□□□ 1.29
PPP1R3F-201ENST00000055335 FOXN1O15353 648 aa23.12■■□□□ 1.29
PPP1R3F-201ENST00000055335 WWC2Q6AWC2 1192 aa23.12■■□□□ 1.29
PPP1R3F-201ENST00000055335 NFATC2IPQ8NCF5 419 aa23.12■■□□□ 1.29
PPP1R3F-201ENST00000055335 VPS18Q9P253 973 aa23.12■■□□□ 1.29
PPP1R3F-201ENST00000055335 ESCO1Q5FWF5 840 aa23.11■■□□□ 1.29
PPP1R3F-201ENST00000055335 CCDC158Q5M9N0 1113 aa23.11■■□□□ 1.29
PPP1R3F-201ENST00000055335 SRRTQ9BXP5 876 aaKnown RBP23.11■■□□□ 1.29
PPP1R3F-201ENST00000055335 COPRSQ9NQ92 184 aa23.11■■□□□ 1.29
PPP1R3F-201ENST00000055335 SETD1AO15047 1707 aaKnown RBP23.11■■□□□ 1.29
PPP1R3F-201ENST00000055335 PHKBQ93100 1093 aa23.11■■□□□ 1.29
PPP1R3F-201ENST00000055335 CACNA1FO60840 1977 aa23.11■■□□□ 1.29
PPP1R3F-201ENST00000055335 KCNA6P17658 529 aa23.11■■□□□ 1.29
PPP1R3F-201ENST00000055335 ZNF274Q96GC6 653 aaPredicted RBP23.11■■□□□ 1.29
PPP1R3F-201ENST00000055335 MTF1Q14872 753 aa23.1■■□□□ 1.29
PPP1R3F-201ENST00000055335 PDIA6Q15084 440 aa23.1■■□□□ 1.29
PPP1R3F-201ENST00000055335 ZNF330Q9Y3S2 320 aaPredicted RBP23.1■■□□□ 1.29
PPP1R3F-201ENST00000055335 MAST3O60307 1309 aa23.1■■□□□ 1.29
PPP1R3F-201ENST00000055335 ANKRD65E5RJM6 399 aa23.1■■□□□ 1.29
PPP1R3F-201ENST00000055335 M0R2C6 588 aa23.1■■□□□ 1.29
PPP1R3F-201ENST00000055335 CCDC82Q8N4S0 544 aa23.1■■□□□ 1.29
PPP1R3F-201ENST00000055335 AK7Q96M32 723 aa23.1■■□□□ 1.29
PPP1R3F-201ENST00000055335 KCND1Q9NSA2 647 aa23.1■■□□□ 1.29
PPP1R3F-201ENST00000055335 PTPRUQ92729 1446 aa23.1■■□□□ 1.29
PPP1R3F-201ENST00000055335 TULP2O00295 520 aa23.1■■□□□ 1.29
PPP1R3F-201ENST00000055335 YEATS4O95619 227 aa23.1■■□□□ 1.29
PPP1R3F-201ENST00000055335 METTL22Q9BUU2 404 aaPredicted RBP23.1■■□□□ 1.29
PPP1R3F-201ENST00000055335 HSD3B7Q9H2F3 369 aa23.09■■□□□ 1.29
PPP1R3F-201ENST00000055335 POLR3EQ9NVU0 708 aa23.09■■□□□ 1.29
PPP1R3F-201ENST00000055335 ADAM21Q9UKJ8 722 aa23.09■■□□□ 1.29
PPP1R3F-201ENST00000055335 PCDHA5Q9Y5H7 936 aa23.09■■□□□ 1.29
PPP1R3F-201ENST00000055335 TFRCP02786 760 aaKnown RBP23.09■■□□□ 1.29
PPP1R3F-201ENST00000055335 APPP05067 770 aa23.09■■□□□ 1.29
PPP1R3F-201ENST00000055335 TPM1P09493 284 aa23.09■■□□□ 1.29
PPP1R3F-201ENST00000055335 AXDND1Q5T1B0 1012 aaPredicted RBP23.09■■□□□ 1.29
PPP1R3F-201ENST00000055335 VSTM4Q8IW00 320 aa23.09■■□□□ 1.29
PPP1R3F-201ENST00000055335 DHX16O60231 1041 aaKnown RBP23.08■■□□□ 1.29
PPP1R3F-201ENST00000055335 CMA1P23946 247 aa23.08■■□□□ 1.29
PPP1R3F-201ENST00000055335 KLHL10Q6JEL2 608 aa23.08■■□□□ 1.29
PPP1R3F-201ENST00000055335 MICU3Q86XE3 530 aa23.08■■□□□ 1.29
PPP1R3F-201ENST00000055335 ALG1Q9BT22 464 aa23.08■■□□□ 1.29
PPP1R3F-201ENST00000055335 SUGCTQ9HAC7 445 aa23.08■■□□□ 1.29
PPP1R3F-201ENST00000055335 RNF216Q9NWF9 866 aaPredicted RBP23.08■■□□□ 1.29
PPP1R3F-201ENST00000055335 ARHGAP6O43182 974 aa23.08■■□□□ 1.29
PPP1R3F-201ENST00000055335 RHOXF2BP0C7M4 288 aa23.08■■□□□ 1.29
PPP1R3F-201ENST00000055335 OSBP2Q969R2 916 aa23.08■■□□□ 1.29
PPP1R3F-201ENST00000055335 RHOXF2Q9BQY4 288 aa23.08■■□□□ 1.29
PPP1R3F-201ENST00000055335 DENND2AQ9ULE3 1009 aa23.08■■□□□ 1.29
PPP1R3F-201ENST00000055335 PHF8Q9UPP1 1060 aa23.08■■□□□ 1.29
PPP1R3F-201ENST00000055335 LONRF3Q496Y0 759 aa23.08■■□□□ 1.28
PPP1R3F-201ENST00000055335 GPR161Q8N6U8 529 aaKnown RBP23.08■■□□□ 1.28
PPP1R3F-201ENST00000055335 PDE4BQ07343 736 aa23.07■■□□□ 1.28
PPP1R3F-201ENST00000055335 IMMTQ16891 758 aaKnown RBP23.07■■□□□ 1.28
PPP1R3F-201ENST00000055335 LONRF2Q1L5Z9 754 aa23.07■■□□□ 1.28
PPP1R3F-201ENST00000055335 BPIFA3Q9BQP9 254 aa23.07■■□□□ 1.28
PPP1R3F-201ENST00000055335 PDE11AQ9HCR9 933 aa23.07■■□□□ 1.28
PPP1R3F-201ENST00000055335 SALL1Q9NSC2 1324 aa23.07■■□□□ 1.28
PPP1R3F-201ENST00000055335 CDC27P30260 824 aa23.07■■□□□ 1.28
PPP1R3F-201ENST00000055335 AMOTQ4VCS5 1084 aa23.07■■□□□ 1.28
PPP1R3F-201ENST00000055335 ZNF790Q6PG37 636 aa23.07■■□□□ 1.28
PPP1R3F-201ENST00000055335 MYL10Q9BUA6 226 aa23.07■■□□□ 1.28
PPP1R3F-201ENST00000055335 DSCC1Q9BVC3 393 aa23.07■■□□□ 1.28
PPP1R3F-201ENST00000055335 NEDD4P46934 1319 aa23.07■■□□□ 1.28
PPP1R3F-201ENST00000055335 KIF23Q02241 960 aaPredicted RBP23.07■■□□□ 1.28
PPP1R3F-201ENST00000055335 LRRC24Q50LG9 513 aa23.07■■□□□ 1.28
PPP1R3F-201ENST00000055335 ZNF496Q96IT1 587 aaPredicted RBP23.07■■□□□ 1.28
PPP1R3F-201ENST00000055335 RASSF4Q9H2L5 321 aa23.07■■□□□ 1.28
PPP1R3F-201ENST00000055335 H3BQF6 201 aa23.06■■□□□ 1.28
PPP1R3F-201ENST00000055335 RFX5P48382 616 aaPredicted RBP23.06■■□□□ 1.28
PPP1R3F-201ENST00000055335 SHC4Q6S5L8 630 aa23.06■■□□□ 1.28
PPP1R3F-201ENST00000055335 VPS37DQ86XT2 251 aa23.06■■□□□ 1.28
PPP1R3F-201ENST00000055335 GRAMD1CQ8IYS0 662 aa23.06■■□□□ 1.28
PPP1R3F-201ENST00000055335 GOLGA1Q92805 767 aa23.06■■□□□ 1.28
PPP1R3F-201ENST00000055335 CCDC102AQ96A19 550 aa23.06■■□□□ 1.28
PPP1R3F-201ENST00000055335 MPHOSPH8Q99549 860 aa23.06■■□□□ 1.28
PPP1R3F-201ENST00000055335 NFE2L3Q9Y4A8 694 aa23.06■■□□□ 1.28
PPP1R3F-201ENST00000055335 A0A0U1RQJ8 604 aa23.06■■□□□ 1.28
PPP1R3F-201ENST00000055335 UBE2Q2LH0YL09 131 aa23.06■■□□□ 1.28
PPP1R3F-201ENST00000055335 TUBB4AP04350 444 aa23.06■■□□□ 1.28
PPP1R3F-201ENST00000055335 ANKRD24Q8TF21 1146 aa23.06■■□□□ 1.28
PPP1R3F-201ENST00000055335 ATRIPQ8WXE1 791 aa23.06■■□□□ 1.28
PPP1R3F-201ENST00000055335 HELLSQ9NRZ9 838 aa23.06■■□□□ 1.28
PPP1R3F-201ENST00000055335 MYO1CO00159 1063 aa23.05■■□□□ 1.28
PPP1R3F-201ENST00000055335 IKBKBO14920 756 aa23.05■■□□□ 1.28
PPP1R3F-201ENST00000055335 RNF113AO15541 343 aaKnown RBP23.05■■□□□ 1.28
PPP1R3F-201ENST00000055335 CCDC102BQ68D86 513 aa23.05■■□□□ 1.28
PPP1R3F-201ENST00000055335 ZMYM1Q5SVZ6 1142 aa23.05■■□□□ 1.28
PPP1R3F-201ENST00000055335 BRAPQ7Z569 592 aa23.05■■□□□ 1.28
PPP1R3F-201ENST00000055335 IPO4Q8TEX9 1081 aaKnown RBP23.05■■□□□ 1.28
PPP1R3F-201ENST00000055335 PLEKHA4Q9H4M7 779 aa23.05■■□□□ 1.28
PPP1R3F-201ENST00000055335 FGAP02671 866 aa23.04■■□□□ 1.28
PPP1R3F-201ENST00000055335 STX17P56962 302 aa23.04■■□□□ 1.28
PPP1R3F-201ENST00000055335 LEKR1Q6ZMV7 388 aa23.04■■□□□ 1.28
PPP1R3F-201ENST00000055335 NFXL1Q6ZNB6 911 aa23.04■■□□□ 1.28
PPP1R3F-201ENST00000055335 FOXP4Q8IVH2 680 aaPredicted RBP23.04■■□□□ 1.28
PPP1R3F-201ENST00000055335 TTC5Q8N0Z6 440 aa23.04■■□□□ 1.28
PPP1R3F-201ENST00000055335 SOWAHDA6NJG2 315 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms