RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 CPLX2Q6PUV4 134 aaKnown RBP9.68□□□□□ -0.86
VAMP3-201ENST00000054666 TBC1D10CQ8IV04 446 aa9.68□□□□□ -0.86
VAMP3-201ENST00000054666 STRBPQ96SI9 672 aaKnown RBP9.68□□□□□ -0.86
VAMP3-201ENST00000054666 ANGEL1Q9UNK9 670 aaKnown RBP9.68□□□□□ -0.86
VAMP3-201ENST00000054666 NHSQ6T4R5 1651 aa9.67□□□□□ -0.86
VAMP3-201ENST00000054666 CDKL5O76039 1030 aa9.67□□□□□ -0.86
VAMP3-201ENST00000054666 ANTXR2P58335 489 aa9.67□□□□□ -0.86
VAMP3-201ENST00000054666 ALX1Q15699 326 aa9.67□□□□□ -0.86
VAMP3-201ENST00000054666 ERFEQ4G0M1 354 aa9.67□□□□□ -0.86
VAMP3-201ENST00000054666 C8orf76Q96K31 380 aa9.67□□□□□ -0.86
VAMP3-201ENST00000054666 TMEM87BQ96K49 555 aa9.67□□□□□ -0.86
VAMP3-201ENST00000054666 TNMDQ9H2S6 317 aa9.67□□□□□ -0.86
VAMP3-201ENST00000054666 LRP2BPQ9P2M1 347 aa9.67□□□□□ -0.86
VAMP3-201ENST00000054666 CCDC39Q9UFE4 941 aa9.67□□□□□ -0.86
VAMP3-201ENST00000054666 BTAF1O14981 1849 aa9.67□□□□□ -0.86
VAMP3-201ENST00000054666 CHD4Q14839 1912 aa9.67□□□□□ -0.86
VAMP3-201ENST00000054666 TIAM2Q8IVF5 1701 aa9.67□□□□□ -0.86
VAMP3-201ENST00000054666 PATL2C9JE40 543 aaKnown RBP9.67□□□□□ -0.86
VAMP3-201ENST00000054666 SNAP23O00161 211 aa9.67□□□□□ -0.86
VAMP3-201ENST00000054666 PTMAP06454 111 aaKnown RBP9.67□□□□□ -0.86
VAMP3-201ENST00000054666 TDO2P48775 406 aa9.67□□□□□ -0.86
VAMP3-201ENST00000054666 BCAMP50895 628 aa9.67□□□□□ -0.86
VAMP3-201ENST00000054666 SF3B3Q15393 1217 aaKnown RBP9.67□□□□□ -0.86
VAMP3-201ENST00000054666 BICDL1Q6ZP65 573 aa9.67□□□□□ -0.86
VAMP3-201ENST00000054666 VPS37DQ86XT2 251 aa9.67□□□□□ -0.86
VAMP3-201ENST00000054666 CNNM2Q9H8M5 875 aa9.67□□□□□ -0.86
VAMP3-201ENST00000054666 GPHNQ9NQX3 736 aaPredicted RBP9.67□□□□□ -0.86
VAMP3-201ENST00000054666 DACT1Q9NYF0 836 aa9.67□□□□□ -0.86
VAMP3-201ENST00000054666 USP21Q9UK80 565 aa9.67□□□□□ -0.86
VAMP3-201ENST00000054666 A0A1B0GUL6 1792 aa9.66□□□□□ -0.86
VAMP3-201ENST00000054666 ZPR1O75312 459 aa9.66□□□□□ -0.86
VAMP3-201ENST00000054666 LIG1P18858 919 aa9.66□□□□□ -0.86
VAMP3-201ENST00000054666 METAP2P50579 478 aaKnown RBP eCLIP9.66□□□□□ -0.86
VAMP3-201ENST00000054666 GUCY1B3Q02153 619 aa9.66□□□□□ -0.86
VAMP3-201ENST00000054666 UBE4AQ14139 1066 aa9.66□□□□□ -0.86
VAMP3-201ENST00000054666 CAVIN4Q5BKX8 364 aa9.66□□□□□ -0.86
VAMP3-201ENST00000054666 RC3H1Q5TC82 1133 aaKnown RBP9.66□□□□□ -0.86
VAMP3-201ENST00000054666 NFXL1Q6ZNB6 911 aa9.66□□□□□ -0.86
VAMP3-201ENST00000054666 IFNL3Q8IZI9 196 aa9.66□□□□□ -0.86
VAMP3-201ENST00000054666 FNBP4Q8N3X1 1017 aaPredicted RBP9.66□□□□□ -0.86
VAMP3-201ENST00000054666 NBPF3Q9H094 633 aa9.66□□□□□ -0.86
VAMP3-201ENST00000054666 ARMT1Q9H993 441 aa9.66□□□□□ -0.86
VAMP3-201ENST00000054666 BSDC1Q9NW68 430 aaPredicted RBP9.66□□□□□ -0.86
VAMP3-201ENST00000054666 ORC3Q9UBD5 711 aaPredicted RBP9.66□□□□□ -0.86
VAMP3-201ENST00000054666 SPATA31A6Q5VVP1 1343 aa9.66□□□□□ -0.86
VAMP3-201ENST00000054666 PNPLA7Q6ZV29 1317 aa9.66□□□□□ -0.86
VAMP3-201ENST00000054666 CASZ1Q86V15 1759 aa9.66□□□□□ -0.86
VAMP3-201ENST00000054666 THSD7AQ9UPZ6 1657 aa9.66□□□□□ -0.86
VAMP3-201ENST00000054666 COL24A1Q17RW2 1714 aa9.66□□□□□ -0.86
VAMP3-201ENST00000054666 B4E1Z4 1266 aa9.66□□□□□ -0.86
VAMP3-201ENST00000054666 SH2B2O14492 632 aaPredicted RBP9.66□□□□□ -0.86
VAMP3-201ENST00000054666 GNPATO15228 680 aa9.66□□□□□ -0.86
VAMP3-201ENST00000054666 SETDB2Q96T68 719 aa9.66□□□□□ -0.86
VAMP3-201ENST00000054666 FUCA2Q9BTY2 467 aa9.66□□□□□ -0.86
VAMP3-201ENST00000054666 KRT23Q9C075 422 aa9.66□□□□□ -0.86
VAMP3-201ENST00000054666 CLSTN2Q9H4D0 955 aa9.66□□□□□ -0.86
VAMP3-201ENST00000054666 EPB41L4AQ9HCS5 686 aaPredicted RBP9.66□□□□□ -0.86
VAMP3-201ENST00000054666 NARFQ9UHQ1 456 aa9.66□□□□□ -0.86
VAMP3-201ENST00000054666 CCNL1Q9UK58 526 aaPredicted RBP9.66□□□□□ -0.86
VAMP3-201ENST00000054666 SLC4A4Q9Y6R1 1079 aa9.66□□□□□ -0.86
VAMP3-201ENST00000054666 NEDD4P46934 1319 aa9.66□□□□□ -0.86
VAMP3-201ENST00000054666 C4AP0C0L4 1744 aa9.65□□□□□ -0.86
VAMP3-201ENST00000054666 C4BP0C0L5 1744 aa9.65□□□□□ -0.86
VAMP3-201ENST00000054666 NPHP1O15259 732 aa9.65□□□□□ -0.86
VAMP3-201ENST00000054666 RPS6KA4O75676 772 aa9.65□□□□□ -0.86
VAMP3-201ENST00000054666 CEBPZQ03701 1054 aaKnown RBP9.65□□□□□ -0.86
VAMP3-201ENST00000054666 SART3Q15020 963 aaKnown RBP9.65□□□□□ -0.86
VAMP3-201ENST00000054666 TBC1D9BQ66K14 1250 aa9.65□□□□□ -0.86
VAMP3-201ENST00000054666 CCDC73Q6ZRK6 1079 aa9.65□□□□□ -0.86
VAMP3-201ENST00000054666 NBPF5PQ86XG9 351 aaPredicted RBP9.65□□□□□ -0.86
VAMP3-201ENST00000054666 RNF41Q9H4P4 317 aaPredicted RBP9.65□□□□□ -0.86
VAMP3-201ENST00000054666 ABCF2Q9UG63 623 aa9.65□□□□□ -0.86
VAMP3-201ENST00000054666 HPS5Q9UPZ3 1129 aa9.65□□□□□ -0.86
VAMP3-201ENST00000054666 RTCBQ9Y3I0 505 aaKnown RBP9.65□□□□□ -0.86
VAMP3-201ENST00000054666 ZNF804BA4D1E1 1349 aa9.65□□□□□ -0.86
VAMP3-201ENST00000054666 ZBTB43O43298 467 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 PPFIA3O75145 1194 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 CYP7A1P22680 504 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 KCNQ4P56696 695 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 TMEM67Q5HYA8 995 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 AKNAD1Q5T1N1 836 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 SYNE3Q6ZMZ3 975 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 MFSD6Q6ZSS7 791 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 CYB5R4Q7L1T6 521 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 BRAPQ7Z569 592 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 MICU3Q86XE3 530 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 RAB11FIP4Q86YS3 637 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 LCORLQ8N3X6 602 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 NLRP3Q96P20 1036 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 TOMM22Q9NS69 142 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 RAI14Q9P0K7 980 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 USP25Q9UHP3 1055 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 DENND2AQ9ULE3 1009 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 ERICH2A1L162 156 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 CCDC69A6NI79 296 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 GOLGA8AA7E2F4 631 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 FDPSP14324 419 aaKnown RBP9.64□□□□□ -0.87
VAMP3-201ENST00000054666 TYRO3Q06418 890 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 CAMK4Q16566 473 aa9.64□□□□□ -0.87
VAMP3-201ENST00000054666 SLC10A5Q5PT55 438 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms