RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Col1a1P11087 1453 aa17.59■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Ugt1a5B2RT14 529 aa17.59■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Gnat2P50149 354 aa17.59■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Slc10a5Q5PT54 434 aa17.59■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Kank4Q6P9J5 1016 aa17.59■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Tex2Q6ZPJ0 1128 aaKnown RBP17.59■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Jakmip1Q8BVL9 626 aa17.59■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Usp44Q8C2S0 711 aa17.59■□□□□ 0.41
Ercc1-201ENSMUST00000003645 ParnQ8VDG3 624 aa17.59■□□□□ 0.41
Ercc1-201ENSMUST00000003645 Glt1d1A4FUP9 346 aa17.58■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Arid4aF8VPQ2 1261 aaKnown RBP17.58■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Npr3P70180 536 aa17.58■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Map9Q3TRR0 646 aa17.58■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Tshz3Q8CGV9 1081 aa17.58■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Ces1dQ8VCT4 565 aa17.58■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Megf6Q80V70 1572 aa17.58■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Golgb1E9PVZ8 3238 aa17.57■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Gm10093D3YYI8 482 aa17.57■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Hdac1O09106 482 aaKnown RBP17.57■□□□□ 0.4
Ercc1-201ENSMUST00000003645 CrcpO35427 148 aa17.57■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Slc4a4O88343 1079 aa17.57■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Lrch1P62046 709 aa17.57■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Large2Q5XPT3 690 aa17.57■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Ccdc93Q7TQK5 629 aa17.57■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Adck5Q80V03 582 aa17.57■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Kcnq3Q8K3F6 873 aa17.57■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Tbc1d7Q9D0K0 293 aa17.57■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Zfp646Q6NV66 1788 aa17.57■□□□□ 0.4
Ercc1-201ENSMUST00000003645 MccE9PWI3 1003 aa17.56■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Anapc15P60007 132 aa17.56■□□□□ 0.4
Ercc1-201ENSMUST00000003645 1700123L14RikQ3V2K7 440 aa17.56■□□□□ 0.4
Ercc1-201ENSMUST00000003645 CrkQ64010 304 aa17.56■□□□□ 0.4
Ercc1-201ENSMUST00000003645 SpidrQ8BGX7 933 aa17.56■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Znf428Q8C1M2 176 aa17.56■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Rbm43Q99J64 343 aa17.56■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Hps4Q99KG7 671 aa17.56■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Pet2A2AHY8 747 aa17.55■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Zkscan16A2ALW2 728 aa17.55■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Dhx16G3X8X0 1044 aaKnown RBP17.55■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Spata18Q0P557 537 aa17.55■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Gpr162Q3UN16 588 aa17.55■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Ankrd13aQ80UP5 588 aa17.55■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Rabep1O35551 862 aa17.54■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Prl7a2O54831 253 aa17.54■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Bnip3O55003 187 aa17.54■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Eif6O55135 245 aa17.54■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Mrps27Q8BK72 415 aaKnown RBP17.54■□□□□ 0.4
Ercc1-201ENSMUST00000003645 EngaseQ8BX80 734 aa17.54■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Tbc1d23Q8K0F1 684 aa17.54■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Stn1Q8K2X3 378 aa17.54■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Txnrd3Q99MD6 652 aa17.54■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Kcnb2A6H8H5 907 aa17.53■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Grem2O88273 168 aa17.53■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Kcna3P16390 528 aa17.53■□□□□ 0.4
Ercc1-201ENSMUST00000003645 NogP97466 232 aa17.53■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Rpusd2Q149F1 553 aa17.53■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Map3k12Q60700 888 aa17.53■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Shisa4Q8CA71 197 aa17.53■□□□□ 0.4
Ercc1-201ENSMUST00000003645 MlphQ91V27 590 aa17.53■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Hmg20bQ9Z104 317 aa17.53■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Ecm29Q6PDI5 1840 aa17.53■□□□□ 0.4
Ercc1-201ENSMUST00000003645 GabreA2AMW3 916 aa17.53■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Rps12P63323 132 aaKnown RBP17.53■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Mum1l1Q4VA55 681 aa17.53■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Rnf20Q5DTM8 973 aa17.53■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Bms1Q6PGF5 1284 aaKnown RBP17.53■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Sgsm2Q80U12 1005 aa17.53■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Tmem67Q8BR76 992 aa17.53■□□□□ 0.4
Ercc1-201ENSMUST00000003645 Prss40A6H6T1 365 aa17.52■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Fdx1P46656 188 aa17.52■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Mmp14P53690 582 aa17.52■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Usp48Q3V0C5 1052 aa17.52■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Stac3Q8BZ71 360 aa17.52■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Zbed3Q9D0L1 228 aa17.52■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Klf15Q9EPW2 415 aa17.52■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Usp42B2RQC2 1324 aaKnown RBP17.52■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Fbxl16A2RT62 479 aa17.51■□□□□ 0.39
Ercc1-201ENSMUST00000003645 UncxO08934 530 aa17.51■□□□□ 0.39
Ercc1-201ENSMUST00000003645 NapbP28663 298 aa17.51■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Tom1l2Q5SRX1 507 aa17.51■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Lamc2Q61092 1191 aa17.51■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Ptrh1Q8BW00 204 aa17.51■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Atf7Q8R0S1 413 aa17.51■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Hdac9Q99N13 588 aa17.51■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Aox4Q3TYQ9 1336 aa17.51■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Dennd3A2RT67 1274 aa17.5■□□□□ 0.39
Ercc1-201ENSMUST00000003645 GmpsQ3THK7 693 aa17.5■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Tbc1d2bQ3U0J8 965 aa17.5■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Ctr9Q62018 1173 aaKnown RBP17.5■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Agtpbp1Q641K1 1218 aa17.5■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Acap3Q6NXL5 833 aa17.5■□□□□ 0.39
Ercc1-201ENSMUST00000003645 ImmtQ8CAQ8 757 aaKnown RBP17.5■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Eaf2Q91ZD6 262 aa17.5■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Dcdc2bF7BCK0 340 aa17.49■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Rnf180Q3U827 592 aa17.49■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Sp8Q8BMJ8 486 aa17.49■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Myl6bQ8CI43 207 aa17.49■□□□□ 0.39
Ercc1-201ENSMUST00000003645 Ndfip2Q91ZP6 311 aa17.49■□□□□ 0.39
Ercc1-201ENSMUST00000003645 LlphQ9D945 130 aaKnown RBP17.49■□□□□ 0.39
Ercc1-201ENSMUST00000003645 NynrinQ5DTZ0 1840 aa17.48■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 66.4 ms