RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 PITPNC1Q9UKF7 332 aa7.67□□□□□ -1.18
PHGDH-212ENST00000641247 RAB22AQ9UL26 194 aa7.67□□□□□ -1.18
PHGDH-212ENST00000641247 HILPDAQ9Y5L2 63 aa7.67□□□□□ -1.18
PHGDH-212ENST00000641247 PLECQ15149 4684 aaKnown RBP7.66□□□□□ -1.18
PHGDH-212ENST00000641247 IGKV1-27A0A075B6S5 117 aa7.66□□□□□ -1.18
PHGDH-212ENST00000641247 C17orf98A8MV24 154 aa7.66□□□□□ -1.18
PHGDH-212ENST00000641247 TMEM14DPA8MWL7 114 aa7.66□□□□□ -1.18
PHGDH-212ENST00000641247 AP4M1O00189 453 aa7.66□□□□□ -1.18
PHGDH-212ENST00000641247 TAAR5O14804 337 aa7.66□□□□□ -1.18
PHGDH-212ENST00000641247 FGF16O43320 207 aa7.66□□□□□ -1.18
PHGDH-212ENST00000641247 CLN5O75503 358 aa7.66□□□□□ -1.18
PHGDH-212ENST00000641247 SPDEFO95238 335 aa7.66□□□□□ -1.18
PHGDH-212ENST00000641247 AKAIN1P0CW23 69 aa7.66□□□□□ -1.18
PHGDH-212ENST00000641247 MYCNOSP40205 109 aa7.66□□□□□ -1.18
PHGDH-212ENST00000641247 ACTBP60709 375 aa7.66□□□□□ -1.18
PHGDH-212ENST00000641247 RPL31P62899 125 aaKnown RBP7.66□□□□□ -1.18
PHGDH-212ENST00000641247 PJVKQ0ZLH3 352 aa7.66□□□□□ -1.18
PHGDH-212ENST00000641247 PLA2G7Q13093 441 aa7.66□□□□□ -1.18
PHGDH-212ENST00000641247 ATRAIDQ6UW56 229 aa7.66□□□□□ -1.18
PHGDH-212ENST00000641247 ASCL4Q6XD76 172 aa7.66□□□□□ -1.18
PHGDH-212ENST00000641247 OR2W3Q7Z3T1 314 aa7.66□□□□□ -1.18
PHGDH-212ENST00000641247 PUSL1Q8N0Z8 303 aaKnown RBP7.66□□□□□ -1.18
PHGDH-212ENST00000641247 OR11H6Q8NGC7 330 aa7.66□□□□□ -1.18
PHGDH-212ENST00000641247 KCNG3Q8TAE7 436 aa7.66□□□□□ -1.18
PHGDH-212ENST00000641247 HPSE2Q8WWQ2 592 aa7.66□□□□□ -1.18
PHGDH-212ENST00000641247 OR5P3Q8WZ94 311 aa7.66□□□□□ -1.18
PHGDH-212ENST00000641247 RBMXL1Q96E39 390 aaKnown RBP7.66□□□□□ -1.18
PHGDH-212ENST00000641247 SDSLQ96GA7 329 aa7.66□□□□□ -1.18
PHGDH-212ENST00000641247 TOLLIPQ9H0E2 274 aa7.66□□□□□ -1.18
PHGDH-212ENST00000641247 KCNK15Q9H427 330 aa7.66□□□□□ -1.18
PHGDH-212ENST00000641247 TREM1Q9NP99 234 aa7.66□□□□□ -1.18
PHGDH-212ENST00000641247 KCNIP3Q9Y2W7 256 aa7.66□□□□□ -1.18
PHGDH-212ENST00000641247 TBL2Q9Y4P3 447 aaKnown RBP7.66□□□□□ -1.18
PHGDH-212ENST00000641247 A0A0A6YYH2 397 aa7.65□□□□□ -1.18
PHGDH-212ENST00000641247 RNF222A6NCQ9 220 aa7.65□□□□□ -1.18
PHGDH-212ENST00000641247 A6NJ64 397 aa7.65□□□□□ -1.18
PHGDH-212ENST00000641247 OR5B21A6NL26 309 aa7.65□□□□□ -1.18
PHGDH-212ENST00000641247 ZNF732B4DXR9 585 aa7.65□□□□□ -1.18
PHGDH-212ENST00000641247 SLC31A2O15432 143 aa7.65□□□□□ -1.18
PHGDH-212ENST00000641247 XRCC3O43542 346 aa7.65□□□□□ -1.18
PHGDH-212ENST00000641247 SCGNO76038 276 aa7.65□□□□□ -1.18
PHGDH-212ENST00000641247 GLAP06280 429 aa7.65□□□□□ -1.18
PHGDH-212ENST00000641247 TMEM225BP0DP42 221 aa7.65□□□□□ -1.18
PHGDH-212ENST00000641247 HLA-GP17693 338 aa7.65□□□□□ -1.18
PHGDH-212ENST00000641247 GLRA1P23415 457 aa7.65□□□□□ -1.18
PHGDH-212ENST00000641247 CDK2P24941 298 aa7.65□□□□□ -1.18
PHGDH-212ENST00000641247 SNRPEP62304 92 aaKnown RBP7.65□□□□□ -1.18
PHGDH-212ENST00000641247 GNG3P63215 75 aa7.65□□□□□ -1.18
PHGDH-212ENST00000641247 UNC119Q13432 240 aa7.65□□□□□ -1.18
PHGDH-212ENST00000641247 MADCAM1Q13477 382 aa7.65□□□□□ -1.18
PHGDH-212ENST00000641247 TMEM69Q5SWH9 247 aa7.65□□□□□ -1.18
PHGDH-212ENST00000641247 OR10K2Q6IF99 312 aa7.65□□□□□ -1.18
PHGDH-212ENST00000641247 OR5D18Q8NGL1 313 aa7.65□□□□□ -1.18
PHGDH-212ENST00000641247 RXFP4Q8TDU9 374 aa7.65□□□□□ -1.18
PHGDH-212ENST00000641247 PCNPQ8WW12 178 aaKnown RBP7.65□□□□□ -1.18
PHGDH-212ENST00000641247 RAB24Q969Q5 203 aa7.65□□□□□ -1.18
PHGDH-212ENST00000641247 RAX2Q96IS3 184 aa7.65□□□□□ -1.18
PHGDH-212ENST00000641247 MICU1Q9BPX6 476 aa7.65□□□□□ -1.18
PHGDH-212ENST00000641247 ZNF471Q9BX82 626 aaPredicted RBP7.65□□□□□ -1.18
PHGDH-212ENST00000641247 CST11Q9H112 138 aa7.65□□□□□ -1.18
PHGDH-212ENST00000641247 ATG5Q9H1Y0 275 aa7.65□□□□□ -1.18
PHGDH-212ENST00000641247 SMDT1Q9H4I9 107 aa7.65□□□□□ -1.18
PHGDH-212ENST00000641247 ELOA3CA0A087WX78 387 aaPredicted RBP7.64□□□□□ -1.19
PHGDH-212ENST00000641247 RBMY1BA6NDE4 496 aaKnown RBP7.64□□□□□ -1.19
PHGDH-212ENST00000641247 RBMY1EA6NEQ0 496 aaKnown RBP7.64□□□□□ -1.19
PHGDH-212ENST00000641247 MFNGO00587 321 aa7.64□□□□□ -1.19
PHGDH-212ENST00000641247 GOSR2O14653 212 aa7.64□□□□□ -1.19
PHGDH-212ENST00000641247 RBMY1DP0C7P1 496 aaKnown RBP7.64□□□□□ -1.19
PHGDH-212ENST00000641247 PET100P0DJ07 73 aa7.64□□□□□ -1.19
PHGDH-212ENST00000641247 RCC1P18754 421 aaPredicted RBP7.64□□□□□ -1.19
PHGDH-212ENST00000641247 VAMP1P23763 118 aa7.64□□□□□ -1.19
PHGDH-212ENST00000641247 KCNJ3P48549 501 aa7.64□□□□□ -1.19
PHGDH-212ENST00000641247 GPM6AP51674 278 aa7.64□□□□□ -1.19
PHGDH-212ENST00000641247 TAS2R20P59543 309 aa7.64□□□□□ -1.19
PHGDH-212ENST00000641247 PKIAP61925 76 aa7.64□□□□□ -1.19
PHGDH-212ENST00000641247 RHEBQ15382 184 aa7.64□□□□□ -1.19
PHGDH-212ENST00000641247 SLC22A6Q4U2R8 563 aa7.64□□□□□ -1.19
PHGDH-212ENST00000641247 ZNF573Q86YE8 665 aa7.64□□□□□ -1.19
PHGDH-212ENST00000641247 IZUMO1Q8IYV9 350 aa7.64□□□□□ -1.19
PHGDH-212ENST00000641247 SAXO1Q8IYX7 474 aa7.64□□□□□ -1.19
PHGDH-212ENST00000641247 OSR2Q8N2R0 312 aa7.64□□□□□ -1.19
PHGDH-212ENST00000641247 ZNF565Q8N9K5 539 aa7.64□□□□□ -1.19
PHGDH-212ENST00000641247 TMEM104Q8NE00 496 aa7.64□□□□□ -1.19
PHGDH-212ENST00000641247 FAM46BQ96A09 425 aa7.64□□□□□ -1.19
PHGDH-212ENST00000641247 TMEM68Q96MH6 324 aa7.64□□□□□ -1.19
PHGDH-212ENST00000641247 ZNF488Q96MN9 340 aa7.64□□□□□ -1.19
PHGDH-212ENST00000641247 NOL4LQ96MY1 436 aaPredicted RBP7.64□□□□□ -1.19
PHGDH-212ENST00000641247 CMSS1Q9BQ75 279 aaKnown RBP7.64□□□□□ -1.19
PHGDH-212ENST00000641247 URM1Q9BTM9 101 aaKnown RBP7.64□□□□□ -1.19
PHGDH-212ENST00000641247 RTL8AQ9BWD3 113 aa7.64□□□□□ -1.19
PHGDH-212ENST00000641247 TMEM59Q9BXS4 323 aa7.64□□□□□ -1.19
PHGDH-212ENST00000641247 METTL9Q9H1A3 318 aa7.64□□□□□ -1.19
PHGDH-212ENST00000641247 CHMP1AQ9HD42 196 aaPredicted RBP7.64□□□□□ -1.19
PHGDH-212ENST00000641247 UQCC1Q9NVA1 299 aa7.64□□□□□ -1.19
PHGDH-212ENST00000641247 IL36GQ9NZH8 169 aa7.64□□□□□ -1.19
PHGDH-212ENST00000641247 LINC00527Q9UJ94 153 aa7.64□□□□□ -1.19
PHGDH-212ENST00000641247 TNFSF18Q9UNG2 199 aa7.64□□□□□ -1.19
PHGDH-212ENST00000641247 TMED3Q9Y3Q3 217 aa7.64□□□□□ -1.19
PHGDH-212ENST00000641247 TRAV18A0A075B6X5 111 aa7.63□□□□□ -1.19
PHGDH-212ENST00000641247 IGKV1-12A0A0C4DH73 117 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms