RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 PSG11Q9UQ72 335 aa9.7□□□□□ -0.86
ERGIC3-220ENST00000640748 SOX21Q9Y651 276 aaPredicted RBP9.7□□□□□ -0.86
ERGIC3-220ENST00000640748 VWFP04275 2813 aa9.69□□□□□ -0.86
ERGIC3-220ENST00000640748 F5H0A9 414 aaPredicted RBP9.69□□□□□ -0.86
ERGIC3-220ENST00000640748 ST8SIA5O15466 376 aa9.69□□□□□ -0.86
ERGIC3-220ENST00000640748 VDAC1P21796 283 aa9.69□□□□□ -0.86
ERGIC3-220ENST00000640748 GPR12P47775 334 aa9.69□□□□□ -0.86
ERGIC3-220ENST00000640748 RAB7AP51149 207 aa9.69□□□□□ -0.86
ERGIC3-220ENST00000640748 LOXL3P58215 753 aa9.69□□□□□ -0.86
ERGIC3-220ENST00000640748 RPL31P62899 125 aaKnown RBP9.69□□□□□ -0.86
ERGIC3-220ENST00000640748 ZNF345Q14585 488 aa9.69□□□□□ -0.86
ERGIC3-220ENST00000640748 THOC7Q6I9Y2 204 aaKnown RBP9.69□□□□□ -0.86
ERGIC3-220ENST00000640748 ZNF66Q6ZN08 573 aa9.69□□□□□ -0.86
ERGIC3-220ENST00000640748 TCF23Q7RTU1 214 aa9.69□□□□□ -0.86
ERGIC3-220ENST00000640748 FGFRL1Q8N441 504 aa9.69□□□□□ -0.86
ERGIC3-220ENST00000640748 KCNRGQ8N5I3 272 aa9.69□□□□□ -0.86
ERGIC3-220ENST00000640748 TCTEX1D1Q8N7M0 179 aa9.69□□□□□ -0.86
ERGIC3-220ENST00000640748 INO80EQ8NBZ0 244 aaPredicted RBP9.69□□□□□ -0.86
ERGIC3-220ENST00000640748 OR8H1Q8NGG4 311 aa9.69□□□□□ -0.86
ERGIC3-220ENST00000640748 H1FXQ92522 213 aaKnown RBP9.69□□□□□ -0.86
ERGIC3-220ENST00000640748 RNF126Q9BV68 326 aa9.69□□□□□ -0.86
ERGIC3-220ENST00000640748 PATZ1Q9HBE1 687 aaKnown RBP9.69□□□□□ -0.86
ERGIC3-220ENST00000640748 FAM212BQ9NTI7 297 aaPredicted RBP9.69□□□□□ -0.86
ERGIC3-220ENST00000640748 CTSZQ9UBR2 303 aa9.69□□□□□ -0.86
ERGIC3-220ENST00000640748 INSIG2Q9Y5U4 225 aa9.69□□□□□ -0.86
ERGIC3-220ENST00000640748 AUP1Q9Y679 476 aa9.69□□□□□ -0.86
ERGIC3-220ENST00000640748 A8MXK9 166 aa9.68□□□□□ -0.86
ERGIC3-220ENST00000640748 H0YIZ8 118 aa9.68□□□□□ -0.86
ERGIC3-220ENST00000640748 DVL1O14640 695 aa9.68□□□□□ -0.86
ERGIC3-220ENST00000640748 SCGB1D2O95969 90 aa9.68□□□□□ -0.86
ERGIC3-220ENST00000640748 RNASE1P07998 156 aaKnown RBP9.68□□□□□ -0.86
ERGIC3-220ENST00000640748 OMGP23515 440 aa9.68□□□□□ -0.86
ERGIC3-220ENST00000640748 AP2S1P53680 142 aaPredicted RBP9.68□□□□□ -0.86
ERGIC3-220ENST00000640748 PAX2Q02962 417 aa9.68□□□□□ -0.86
ERGIC3-220ENST00000640748 EIF4EBP1Q13541 118 aaPredicted RBP9.68□□□□□ -0.86
ERGIC3-220ENST00000640748 Q3ZCU0 254 aa9.68□□□□□ -0.86
ERGIC3-220ENST00000640748 TMEM155Q4W5P6 130 aa9.68□□□□□ -0.86
ERGIC3-220ENST00000640748 PDLIM3Q53GG5 364 aaPredicted RBP9.68□□□□□ -0.86
ERGIC3-220ENST00000640748 RBMS3Q6XE24 437 aaKnown RBP9.68□□□□□ -0.86
ERGIC3-220ENST00000640748 RNASE11Q8TAA1 199 aaKnown RBP9.68□□□□□ -0.86
ERGIC3-220ENST00000640748 TCTEX1D2Q8WW35 142 aa9.68□□□□□ -0.86
ERGIC3-220ENST00000640748 ABHD14BQ96IU4 210 aa9.68□□□□□ -0.86
ERGIC3-220ENST00000640748 HSD17B10Q99714 261 aaKnown RBP9.68□□□□□ -0.86
ERGIC3-220ENST00000640748 HEXA-AS1Q9H8Q6 139 aa9.68□□□□□ -0.86
ERGIC3-220ENST00000640748 UNKLQ9H9P5 680 aaKnown RBP9.68□□□□□ -0.86
ERGIC3-220ENST00000640748 C19orf12Q9NSK7 152 aa9.68□□□□□ -0.86
ERGIC3-220ENST00000640748 SDHAF2Q9NX18 166 aa9.68□□□□□ -0.86
ERGIC3-220ENST00000640748 OR5AC2Q9NZP5 309 aa9.68□□□□□ -0.86
ERGIC3-220ENST00000640748 GAB2Q9UQC2 676 aa9.68□□□□□ -0.86
ERGIC3-220ENST00000640748 LSM5Q9Y4Y9 91 aaKnown RBP9.68□□□□□ -0.86
ERGIC3-220ENST00000640748 DOCK11Q5JSL3 2073 aa9.68□□□□□ -0.86
ERGIC3-220ENST00000640748 KANTRA0A1W2PQU2 76 aa9.67□□□□□ -0.86
ERGIC3-220ENST00000640748 RNF222A6NCQ9 220 aa9.67□□□□□ -0.86
ERGIC3-220ENST00000640748 CLDN34H7C241 214 aa9.67□□□□□ -0.86
ERGIC3-220ENST00000640748 K7EPK0 472 aa9.67□□□□□ -0.86
ERGIC3-220ENST00000640748 ATG12O94817 140 aa9.67□□□□□ -0.86
ERGIC3-220ENST00000640748 SLC25A6P12236 298 aa9.67□□□□□ -0.86
ERGIC3-220ENST00000640748 NFYBP25208 207 aa9.67□□□□□ -0.86
ERGIC3-220ENST00000640748 DEFA6Q01524 100 aa9.67□□□□□ -0.86
ERGIC3-220ENST00000640748 PAX8Q06710 450 aa9.67□□□□□ -0.86
ERGIC3-220ENST00000640748 ZNF273Q14593 569 aa9.67□□□□□ -0.86
ERGIC3-220ENST00000640748 NMSQ5H8A3 153 aa9.67□□□□□ -0.86
ERGIC3-220ENST00000640748 TEX261Q6UWH6 196 aa9.67□□□□□ -0.86
ERGIC3-220ENST00000640748 TREML4Q6UXN2 200 aa9.67□□□□□ -0.86
ERGIC3-220ENST00000640748 FOXRED2Q8IWF2 684 aa9.67□□□□□ -0.86
ERGIC3-220ENST00000640748 FAM71E2Q8N5Q1 922 aa9.67□□□□□ -0.86
ERGIC3-220ENST00000640748 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.67□□□□□ -0.86
ERGIC3-220ENST00000640748 OR4D5Q8NGN0 318 aa9.67□□□□□ -0.86
ERGIC3-220ENST00000640748 OR1S1Q8NH92 325 aa9.67□□□□□ -0.86
ERGIC3-220ENST00000640748 LSM10Q969L4 123 aaKnown RBP9.67□□□□□ -0.86
ERGIC3-220ENST00000640748 C5orf30Q96GV9 206 aa9.67□□□□□ -0.86
ERGIC3-220ENST00000640748 ZNF714Q96N38 554 aa9.67□□□□□ -0.86
ERGIC3-220ENST00000640748 AGMATQ9BSE5 352 aa9.67□□□□□ -0.86
ERGIC3-220ENST00000640748 ABHD14AQ9BUJ0 271 aa9.67□□□□□ -0.86
ERGIC3-220ENST00000640748 RPUSD1Q9UJJ7 312 aaKnown RBP9.67□□□□□ -0.86
ERGIC3-220ENST00000640748 U3KQ87 197 aa9.67□□□□□ -0.86
ERGIC3-220ENST00000640748 NOTCH1P46531 2555 aa9.67□□□□□ -0.86
ERGIC3-220ENST00000640748 TRBV23-1A0A0A0MS06 115 aa9.66□□□□□ -0.86
ERGIC3-220ENST00000640748 GPR37O15354 613 aa9.66□□□□□ -0.86
ERGIC3-220ENST00000640748 ST8SIA3O43173 380 aa9.66□□□□□ -0.86
ERGIC3-220ENST00000640748 BCL2L11O43521 198 aa9.66□□□□□ -0.86
ERGIC3-220ENST00000640748 DEDDO75618 318 aa9.66□□□□□ -0.86
ERGIC3-220ENST00000640748 FCN3O75636 299 aa9.66□□□□□ -0.86
ERGIC3-220ENST00000640748 IFNA7P01567 189 aa9.66□□□□□ -0.86
ERGIC3-220ENST00000640748 MBPP02686 304 aaPredicted RBP9.66□□□□□ -0.86
ERGIC3-220ENST00000640748 IGHV4-38-2P0DP08 117 aa9.66□□□□□ -0.86
ERGIC3-220ENST00000640748 LPAR6P43657 344 aa9.66□□□□□ -0.86
ERGIC3-220ENST00000640748 RPL30P62888 115 aaKnown RBP9.66□□□□□ -0.86
ERGIC3-220ENST00000640748 NDUFA5Q16718 116 aa9.66□□□□□ -0.86
ERGIC3-220ENST00000640748 ZNF585BQ52M93 769 aa9.66□□□□□ -0.86
ERGIC3-220ENST00000640748 PRAMEF5Q5TYX0 476 aa9.66□□□□□ -0.86
ERGIC3-220ENST00000640748 TMEM200BQ69YZ2 307 aa9.66□□□□□ -0.86
ERGIC3-220ENST00000640748 BTNL3Q6UXE8 466 aa9.66□□□□□ -0.86
ERGIC3-220ENST00000640748 C9orf139Q6ZV77 190 aa9.66□□□□□ -0.86
ERGIC3-220ENST00000640748 SLC51BQ86UW2 128 aa9.66□□□□□ -0.86
ERGIC3-220ENST00000640748 GPR146Q96CH1 333 aa9.66□□□□□ -0.86
ERGIC3-220ENST00000640748 RRNAD1Q96FB5 475 aaKnown RBP9.66□□□□□ -0.86
ERGIC3-220ENST00000640748 IFI27L2Q9H2X8 130 aa9.66□□□□□ -0.86
ERGIC3-220ENST00000640748 MIOXQ9UGB7 285 aa9.66□□□□□ -0.86
ERGIC3-220ENST00000640748 RCL1Q9Y2P8 373 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms