RNA–Protein interactions for RNA: ENST00000640104.1

SPIN3-235, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,776 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-235ENST00000640104 KHDC3LQ587J8 217 aa11.04□□□□□ -0.64
SPIN3-235ENST00000640104 PRAMEF5Q5TYX0 476 aa11.04□□□□□ -0.64
SPIN3-235ENST00000640104 GFRALQ6UXV0 394 aa11.04□□□□□ -0.64
SPIN3-235ENST00000640104 Q8TCH9 128 aa11.04□□□□□ -0.64
SPIN3-235ENST00000640104 TMEM147Q9BVK8 224 aa11.04□□□□□ -0.64
SPIN3-235ENST00000640104 GYPAP02724 150 aa11.04□□□□□ -0.64
SPIN3-235ENST00000640104 NUP37Q8NFH4 326 aa11.04□□□□□ -0.64
SPIN3-235ENST00000640104 MBD3L1Q8WWY6 194 aa11.04□□□□□ -0.64
SPIN3-235ENST00000640104 PINX1Q96BK5 328 aaKnown RBP11.04□□□□□ -0.64
SPIN3-235ENST00000640104 SDSLQ96GA7 329 aa11.04□□□□□ -0.64
SPIN3-235ENST00000640104 GAFA1Q96PS6 74 aa11.04□□□□□ -0.64
SPIN3-235ENST00000640104 CCL13Q99616 98 aa11.04□□□□□ -0.64
SPIN3-235ENST00000640104 ATXN7O15265 892 aaPredicted RBP11.03□□□□□ -0.64
SPIN3-235ENST00000640104 IFNA17P01571 189 aa11.03□□□□□ -0.64
SPIN3-235ENST00000640104 IGKV1D-33P01593 117 aa11.03□□□□□ -0.64
SPIN3-235ENST00000640104 IGKV1-33P01594 117 aa11.03□□□□□ -0.64
SPIN3-235ENST00000640104 CGB3P0DN86 165 aa11.03□□□□□ -0.64
SPIN3-235ENST00000640104 CGB7P0DN87 165 aa11.03□□□□□ -0.64
SPIN3-235ENST00000640104 C1orf229Q6ZS94 237 aaPredicted RBP11.03□□□□□ -0.64
SPIN3-235ENST00000640104 SPACA3Q8IXA5 215 aa11.03□□□□□ -0.64
SPIN3-235ENST00000640104 FAM216BQ8N7L0 139 aa11.03□□□□□ -0.64
SPIN3-235ENST00000640104 TUBA4BQ9H853 241 aa11.03□□□□□ -0.64
SPIN3-235ENST00000640104 ICE1Q9Y2F5 2266 aa11.03□□□□□ -0.64
SPIN3-235ENST00000640104 ATMQ13315 3056 aa11.03□□□□□ -0.64
SPIN3-235ENST00000640104 DSCAMO60469 2012 aa11.03□□□□□ -0.64
SPIN3-235ENST00000640104 TRGV10A0A0A0MS01 117 aa11.03□□□□□ -0.64
SPIN3-235ENST00000640104 KBTBD11-OT1A0A1B0GTJ5 212 aa11.03□□□□□ -0.64
SPIN3-235ENST00000640104 MAP1LC3B2A6NCE7 125 aa11.03□□□□□ -0.64
SPIN3-235ENST00000640104 BCL2P10415 239 aa11.03□□□□□ -0.64
SPIN3-235ENST00000640104 FGF7P21781 194 aa11.03□□□□□ -0.64
SPIN3-235ENST00000640104 CCL8P80075 99 aa11.03□□□□□ -0.64
SPIN3-235ENST00000640104 TFF3Q07654 80 aa11.03□□□□□ -0.64
SPIN3-235ENST00000640104 ATP6V1FQ16864 119 aa11.03□□□□□ -0.64
SPIN3-235ENST00000640104 ZNF429Q86V71 674 aa11.03□□□□□ -0.64
SPIN3-235ENST00000640104 RAB39BQ96DA2 213 aa11.03□□□□□ -0.64
SPIN3-235ENST00000640104 S1PR3Q99500 378 aa11.03□□□□□ -0.64
SPIN3-235ENST00000640104 MAP1LC3BQ9GZQ8 125 aa11.03□□□□□ -0.64
SPIN3-235ENST00000640104 EGLN1Q9GZT9 426 aa11.03□□□□□ -0.64
SPIN3-235ENST00000640104 GFOD1Q9NXC2 390 aa11.03□□□□□ -0.64
SPIN3-235ENST00000640104 TIMM9Q9Y5J7 89 aa11.03□□□□□ -0.64
SPIN3-235ENST00000640104 ANKRD11Q6UB99 2663 aaPredicted RBP11.03□□□□□ -0.64
SPIN3-235ENST00000640104 DPRXA6NFQ7 191 aa11.02□□□□□ -0.64
SPIN3-235ENST00000640104 IRF2P14316 349 aa11.02□□□□□ -0.64
SPIN3-235ENST00000640104 PRR30Q53SZ7 412 aaPredicted RBP11.02□□□□□ -0.64
SPIN3-235ENST00000640104 CT45A1Q5HYN5 189 aa11.02□□□□□ -0.64
SPIN3-235ENST00000640104 ACSM6Q6P461 480 aa11.02□□□□□ -0.64
SPIN3-235ENST00000640104 TCF23Q7RTU1 214 aa11.02□□□□□ -0.64
SPIN3-235ENST00000640104 FAM24BQ8N5W8 94 aa11.02□□□□□ -0.64
SPIN3-235ENST00000640104 CT45A3Q8NHU0 189 aa11.02□□□□□ -0.64
SPIN3-235ENST00000640104 FAM216AQ8WUB2 273 aa11.02□□□□□ -0.64
SPIN3-235ENST00000640104 SPTBN2O15020 2390 aa11.02□□□□□ -0.65
SPIN3-235ENST00000640104 MT-ND4LP03901 98 aa11.02□□□□□ -0.65
SPIN3-235ENST00000640104 FOLR2P14207 255 aa11.02□□□□□ -0.65
SPIN3-235ENST00000640104 PTAFRP25105 342 aa11.02□□□□□ -0.65
SPIN3-235ENST00000640104 ERVK-16P61578 105 aa11.02□□□□□ -0.65
SPIN3-235ENST00000640104 ZCCHC24Q8N2G6 241 aaKnown RBP11.02□□□□□ -0.65
SPIN3-235ENST00000640104 RPP25LQ8N5L8 163 aaKnown RBP11.02□□□□□ -0.65
SPIN3-235ENST00000640104 OR4A16Q8NH70 328 aa11.02□□□□□ -0.65
SPIN3-235ENST00000640104 ELOVL5Q9NYP7 299 aa11.02□□□□□ -0.65
SPIN3-235ENST00000640104 DOCK11Q5JSL3 2073 aa11.02□□□□□ -0.65
SPIN3-235ENST00000640104 PLCE1Q9P212 2302 aa11.02□□□□□ -0.65
SPIN3-235ENST00000640104 SAA2-SAA4A0A096LPE2 208 aa11.01□□□□□ -0.65
SPIN3-235ENST00000640104 C15orf62A8K5M9 175 aa11.01□□□□□ -0.65
SPIN3-235ENST00000640104 APC2O95996 2303 aa11.01□□□□□ -0.65
SPIN3-235ENST00000640104 SAA2P0DJI9 122 aaPredicted RBP11.01□□□□□ -0.65
SPIN3-235ENST00000640104 RAB7AP51149 207 aa11.01□□□□□ -0.65
SPIN3-235ENST00000640104 RAB11AP62491 216 aa11.01□□□□□ -0.65
SPIN3-235ENST00000640104 BSPH1Q075Z2 132 aa11.01□□□□□ -0.65
SPIN3-235ENST00000640104 RAI1Q7Z5J4 1906 aaPredicted RBP11.01□□□□□ -0.65
SPIN3-235ENST00000640104 SNRNP40Q96DI7 357 aaKnown RBP11.01□□□□□ -0.65
SPIN3-235ENST00000640104 NCOR1P1Q9H4R4 102 aa11.01□□□□□ -0.65
SPIN3-235ENST00000640104 CISD1Q9NZ45 108 aaKnown RBP11.01□□□□□ -0.65
SPIN3-235ENST00000640104 MAP1BP46821 2468 aaKnown RBP11.01□□□□□ -0.65
SPIN3-235ENST00000640104 TRAV3A0A0B4J244 114 aa11.01□□□□□ -0.65
SPIN3-235ENST00000640104 hCG_1809904A0A1W2PP81 198 aa11.01□□□□□ -0.65
SPIN3-235ENST00000640104 A0A1W2PR64 198 aa11.01□□□□□ -0.65
SPIN3-235ENST00000640104 A0A1W2PRV1 198 aa11.01□□□□□ -0.65
SPIN3-235ENST00000640104 HMGB3O15347 200 aaKnown RBP11.01□□□□□ -0.65
SPIN3-235ENST00000640104 RBFOX2O43251 390 aaKnown RBP eCLIP11.01□□□□□ -0.65
SPIN3-235ENST00000640104 THBDP07204 575 aa11.01□□□□□ -0.65
SPIN3-235ENST00000640104 OR4A8P0C604 315 aa11.01□□□□□ -0.65
SPIN3-235ENST00000640104 HABP2Q14520 560 aaPredicted RBP11.01□□□□□ -0.65
SPIN3-235ENST00000640104 ADIPOQQ15848 244 aa11.01□□□□□ -0.65
SPIN3-235ENST00000640104 TBR1Q16650 682 aa11.01□□□□□ -0.65
SPIN3-235ENST00000640104 ZNF788Q6ZQV5 615 aa11.01□□□□□ -0.65
SPIN3-235ENST00000640104 CENPVQ7Z7K6 275 aaPredicted RBP11.01□□□□□ -0.65
SPIN3-235ENST00000640104 NIPSNAP3BQ9BS92 247 aa11.01□□□□□ -0.65
SPIN3-235ENST00000640104 SCNM1Q9BWG6 230 aa11.01□□□□□ -0.65
SPIN3-235ENST00000640104 SLC25A22Q9H936 323 aa11.01□□□□□ -0.65
SPIN3-235ENST00000640104 RAB9BQ9NP90 201 aa11.01□□□□□ -0.65
SPIN3-235ENST00000640104 SLC39A9Q9NUM3 307 aa11.01□□□□□ -0.65
SPIN3-235ENST00000640104 ACACAQ13085 2346 aa11.01□□□□□ -0.65
SPIN3-235ENST00000640104 PTPRZ1P23471 2315 aaPredicted RBP11.01□□□□□ -0.65
SPIN3-235ENST00000640104 DCHS1Q96JQ0 3298 aa11□□□□□ -0.65
SPIN3-235ENST00000640104 NQO2P16083 231 aa11□□□□□ -0.65
SPIN3-235ENST00000640104 TAGLN2P37802 199 aaKnown RBP11□□□□□ -0.65
SPIN3-235ENST00000640104 GNG10P50151 68 aa11□□□□□ -0.65
SPIN3-235ENST00000640104 DLK1P80370 383 aa11□□□□□ -0.65
SPIN3-235ENST00000640104 LYG1Q8N1E2 194 aa11□□□□□ -0.65
SPIN3-235ENST00000640104 DDB2Q92466 427 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms