RNA–Protein interactions for RNA: ENST00000637692.1

CACNA1A-245, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,245 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-245ENST00000637692 TMEM177Q53S58 311 aa11.94□□□□□ -0.5
CACNA1A-245ENST00000637692 SPAG16Q8N0X2 631 aa11.94□□□□□ -0.5
CACNA1A-245ENST00000637692 MINDY2Q8NBR6 621 aa11.94□□□□□ -0.5
CACNA1A-245ENST00000637692 OR51H1Q8NH63 302 aa11.94□□□□□ -0.5
CACNA1A-245ENST00000637692 PIFOQ8TCI5 191 aa11.94□□□□□ -0.5
CACNA1A-245ENST00000637692 FLYWCH2Q96CP2 140 aaKnown RBP11.94□□□□□ -0.5
CACNA1A-245ENST00000637692 MARVELD1Q9BSK0 173 aa11.94□□□□□ -0.5
CACNA1A-245ENST00000637692 PLEKHA2Q9HB19 425 aa11.94□□□□□ -0.5
CACNA1A-245ENST00000637692 RAB18Q9NP72 206 aa11.94□□□□□ -0.5
CACNA1A-245ENST00000637692 COMMD9Q9P000 198 aa11.94□□□□□ -0.5
CACNA1A-245ENST00000637692 VPREB3Q9UKI3 123 aa11.94□□□□□ -0.5
CACNA1A-245ENST00000637692 TCF19Q9Y242 345 aa11.94□□□□□ -0.5
CACNA1A-245ENST00000637692 FN1P02751 2386 aaKnown RBP11.93□□□□□ -0.5
CACNA1A-245ENST00000637692 C3orf85A0A1B0GTC6 90 aa11.93□□□□□ -0.5
CACNA1A-245ENST00000637692 MDFIC2A0A1B0GVS7 189 aa11.93□□□□□ -0.5
CACNA1A-245ENST00000637692 H3BUX3 64 aa11.93□□□□□ -0.5
CACNA1A-245ENST00000637692 ARPC1BO15143 372 aaKnown RBP11.93□□□□□ -0.5
CACNA1A-245ENST00000637692 FCGR3BO75015 233 aa11.93□□□□□ -0.5
CACNA1A-245ENST00000637692 SPDEFO95238 335 aa11.93□□□□□ -0.5
CACNA1A-245ENST00000637692 IGKV1D-33P01593 117 aa11.93□□□□□ -0.5
CACNA1A-245ENST00000637692 IGKV1-33P01594 117 aa11.93□□□□□ -0.5
CACNA1A-245ENST00000637692 SNRNP70P08621 437 aaKnown RBP11.93□□□□□ -0.5
CACNA1A-245ENST00000637692 AKR1C4P17516 323 aa11.93□□□□□ -0.5
CACNA1A-245ENST00000637692 LGALS7P47929 136 aa11.93□□□□□ -0.5
CACNA1A-245ENST00000637692 GLDNQ6ZMI3 551 aaPredicted RBP11.93□□□□□ -0.5
CACNA1A-245ENST00000637692 CADM3Q8N126 398 aa11.93□□□□□ -0.5
CACNA1A-245ENST00000637692 Q8N6K4 173 aa11.93□□□□□ -0.5
CACNA1A-245ENST00000637692 ADAD2Q8NCV1 583 aaKnown RBP11.93□□□□□ -0.5
CACNA1A-245ENST00000637692 TMEM230Q96A57 120 aa11.93□□□□□ -0.5
CACNA1A-245ENST00000637692 EAF1Q96JC9 268 aaPredicted RBP11.93□□□□□ -0.5
CACNA1A-245ENST00000637692 TSNAXQ99598 290 aaKnown RBP11.93□□□□□ -0.5
CACNA1A-245ENST00000637692 C1RLQ9NZP8 487 aa11.93□□□□□ -0.5
CACNA1A-245ENST00000637692 IGHV3-72A0A0B4J1Y9 119 aa11.92□□□□□ -0.5
CACNA1A-245ENST00000637692 A6NDX4 124 aa11.92□□□□□ -0.5
CACNA1A-245ENST00000637692 M0QZK8 103 aa11.92□□□□□ -0.5
CACNA1A-245ENST00000637692 HOXA3O43365 443 aaPredicted RBP11.92□□□□□ -0.5
CACNA1A-245ENST00000637692 PRAF2O60831 178 aa11.92□□□□□ -0.5
CACNA1A-245ENST00000637692 ATG12O94817 140 aa11.92□□□□□ -0.5
CACNA1A-245ENST00000637692 HPRT1P00492 218 aa11.92□□□□□ -0.5
CACNA1A-245ENST00000637692 HRASP01112 189 aa11.92□□□□□ -0.5
CACNA1A-245ENST00000637692 IFNA2P01563 188 aa11.92□□□□□ -0.5
CACNA1A-245ENST00000637692 IGHV4-59P01825 116 aa11.92□□□□□ -0.5
CACNA1A-245ENST00000637692 SERPINE2P07093 398 aa11.92□□□□□ -0.5
CACNA1A-245ENST00000637692 UCP1P25874 307 aa11.92□□□□□ -0.5
CACNA1A-245ENST00000637692 PAX6P26367 422 aa11.92□□□□□ -0.5
CACNA1A-245ENST00000637692 HILS1P60008 231 aa11.92□□□□□ -0.5
CACNA1A-245ENST00000637692 HES1Q14469 280 aa11.92□□□□□ -0.5
CACNA1A-245ENST00000637692 TMEM222Q9H0R3 208 aa11.92□□□□□ -0.5
CACNA1A-245ENST00000637692 NIPBLQ6KC79 2804 aaeCLIP11.92□□□□□ -0.5
CACNA1A-245ENST00000637692 TEP1Q99973 2627 aaKnown RBP11.91□□□□□ -0.5
CACNA1A-245ENST00000637692 SVEP1Q4LDE5 3571 aa11.91□□□□□ -0.5
CACNA1A-245ENST00000637692 TRAV6A0A075B6T7 132 aa11.91□□□□□ -0.5
CACNA1A-245ENST00000637692 OR2F2O95006 317 aa11.91□□□□□ -0.5
CACNA1A-245ENST00000637692 CRYZL1O95825 349 aa11.91□□□□□ -0.5
CACNA1A-245ENST00000637692 IGKV1-16P04430 117 aa11.91□□□□□ -0.5
CACNA1A-245ENST00000637692 IL5P05113 134 aa11.91□□□□□ -0.5
CACNA1A-245ENST00000637692 TMEM11P17152 192 aa11.91□□□□□ -0.5
CACNA1A-245ENST00000637692 BRWD1-AS2P59051 145 aa11.91□□□□□ -0.5
CACNA1A-245ENST00000637692 LINC00205P59089 165 aa11.91□□□□□ -0.5
CACNA1A-245ENST00000637692 RPL15P61313 204 aaKnown RBP11.91□□□□□ -0.5
CACNA1A-245ENST00000637692 SUPT4H1P63272 117 aaKnown RBP11.91□□□□□ -0.5
CACNA1A-245ENST00000637692 POU2AF1Q16633 256 aa11.91□□□□□ -0.5
CACNA1A-245ENST00000637692 NPBQ8NG41 125 aa11.91□□□□□ -0.5
CACNA1A-245ENST00000637692 IL22RA2Q969J5 263 aa11.91□□□□□ -0.5
CACNA1A-245ENST00000637692 RBM14Q96PK6 669 aaKnown RBP11.91□□□□□ -0.5
CACNA1A-245ENST00000637692 GPHA2Q96T91 129 aa11.91□□□□□ -0.5
CACNA1A-245ENST00000637692 FLVCR2Q9UPI3 526 aa11.91□□□□□ -0.5
CACNA1A-245ENST00000637692 INMT-MINDY4F8WBC2 141 aa11.9□□□□□ -0.5
CACNA1A-245ENST00000637692 SHOXO15266 292 aa11.9□□□□□ -0.5
CACNA1A-245ENST00000637692 FGF16O43320 207 aa11.9□□□□□ -0.5
CACNA1A-245ENST00000637692 RAMP3O60896 148 aa11.9□□□□□ -0.5
CACNA1A-245ENST00000637692 CDS2O95674 445 aa11.9□□□□□ -0.5
CACNA1A-245ENST00000637692 DHFRP00374 187 aa11.9□□□□□ -0.5
CACNA1A-245ENST00000637692 OR4E1P0C645 316 aa11.9□□□□□ -0.5
CACNA1A-245ENST00000637692 NQO2P16083 231 aa11.9□□□□□ -0.5
CACNA1A-245ENST00000637692 ANXA7P20073 488 aaKnown RBP11.9□□□□□ -0.5
CACNA1A-245ENST00000637692 VAMP1P23763 118 aa11.9□□□□□ -0.5
CACNA1A-245ENST00000637692 RPS16P62249 146 aaKnown RBP11.9□□□□□ -0.5
CACNA1A-245ENST00000637692 PPP1R1AQ13522 171 aa11.9□□□□□ -0.5
CACNA1A-245ENST00000637692 OXA1LQ15070 435 aa11.9□□□□□ -0.5
CACNA1A-245ENST00000637692 C4orf46Q504U0 113 aa11.9□□□□□ -0.5
CACNA1A-245ENST00000637692 ZNF585BQ52M93 769 aa11.9□□□□□ -0.5
CACNA1A-245ENST00000637692 OR2B11Q5JQS5 317 aa11.9□□□□□ -0.5
CACNA1A-245ENST00000637692 CCBE1Q6UXH8 406 aaPredicted RBP11.9□□□□□ -0.5
CACNA1A-245ENST00000637692 LYG2Q86SG7 212 aa11.9□□□□□ -0.5
CACNA1A-245ENST00000637692 GLYATL2Q8WU03 294 aa11.9□□□□□ -0.5
CACNA1A-245ENST00000637692 CHPT1Q8WUD6 406 aa11.9□□□□□ -0.5
CACNA1A-245ENST00000637692 HARBI1Q96MB7 349 aa11.9□□□□□ -0.5
CACNA1A-245ENST00000637692 TMEM56Q96MV1 263 aa11.9□□□□□ -0.5
CACNA1A-245ENST00000637692 TP53RKQ96S44 253 aa11.9□□□□□ -0.5
CACNA1A-245ENST00000637692 TMEM56-RWDD3S4R434 201 aa11.9□□□□□ -0.5
CACNA1A-245ENST00000637692 ANK3Q12955 4377 aaKnown RBP11.9□□□□□ -0.5
CACNA1A-245ENST00000637692 DUXBA0A1W2PPF3 345 aa11.89□□□□□ -0.51
CACNA1A-245ENST00000637692 C9orf170A2RU37 121 aa11.89□□□□□ -0.51
CACNA1A-245ENST00000637692 DNAJC9-AS1A6NH13 148 aa11.89□□□□□ -0.51
CACNA1A-245ENST00000637692 TCF21O43680 179 aa11.89□□□□□ -0.51
CACNA1A-245ENST00000637692 NDUFA3O95167 84 aa11.89□□□□□ -0.51
CACNA1A-245ENST00000637692 SFT2D2O95562 160 aa11.89□□□□□ -0.51
CACNA1A-245ENST00000637692 DUS4LO95620 317 aaKnown RBP11.89□□□□□ -0.51
CACNA1A-245ENST00000637692 HLA-AP01891 365 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms