RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 GUCA1AP43080 201 aaPredicted RBP2.36□□□□□ -2.03
VIM-210ENST00000637053 RPL34P49207 117 aaKnown RBP2.36□□□□□ -2.03
VIM-210ENST00000637053 KLK7P49862 253 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 NDUFA8P51970 172 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 FOXA1P55317 472 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 BRWD1-AS2P59051 145 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 TPPP2P59282 170 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 HERV-K104P61576 105 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 LMO4P61968 165 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 EIF5AP63241 154 aaKnown RBP2.36□□□□□ -2.03
VIM-210ENST00000637053 MYL5Q02045 173 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 DHRS2Q13268 280 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 PEA15Q15121 130 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 ZNF141Q15928 474 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 LINC00242Q5T6M2 205 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 TMEM244Q5VVB8 128 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 FKBP1CQ5VVH2 108 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 ZNF773Q6PK81 442 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 SBSNQ6UWP8 590 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 TMEM14EPQ6UXP3 125 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 CLEC19AQ6UXS0 136 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 GFRALQ6UXV0 394 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 ZNF705AQ6ZN79 300 aaPredicted RBP2.36□□□□□ -2.03
VIM-210ENST00000637053 ZNF493Q6ZR52 646 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 Q6ZSV7 163 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 VN1R4Q7Z5H5 301 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 LHFPL1Q86WI0 220 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 ZNF440Q8IYI8 595 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 SVBPQ8N300 66 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 ZNF843Q8N446 348 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 FAM71E2Q8N5Q1 922 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 ZNF441Q8N8Z8 693 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 SUMF2Q8NBJ7 301 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 NEXN-AS1Q8NBZ9 246 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 OR2M3Q8NG83 312 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 SLC25A40Q8TBP6 338 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 LRRC29Q8WV35 223 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 FRZBQ92765 325 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 ZNF300Q96RE9 604 aaPredicted RBP2.36□□□□□ -2.03
VIM-210ENST00000637053 LINC01587Q99440 93 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 RERGLQ9H628 205 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 CXorf21Q9HAI6 301 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 EXOSC3Q9NQT5 275 aaKnown RBP2.36□□□□□ -2.03
VIM-210ENST00000637053 TVP23BQ9NYZ1 205 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 MTFP1Q9UDX5 166 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 ZNF629Q9UEG4 869 aaPredicted RBP2.36□□□□□ -2.03
VIM-210ENST00000637053 SHPKQ9UHJ6 478 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 AMMECR1Q9Y4X0 333 aaPredicted RBP2.36□□□□□ -2.03
VIM-210ENST00000637053 NEUROG3Q9Y4Z2 214 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 AP4S1Q9Y587 144 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 MTCL1Q9Y4B5 1905 aaKnown RBP2.36□□□□□ -2.03
VIM-210ENST00000637053 ARHGEF11O15085 1522 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 MYH11P35749 1972 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 ADAMTS12P58397 1594 aa2.36□□□□□ -2.03
VIM-210ENST00000637053 PHIPQ8WWQ0 1821 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 PLCH2O75038 1416 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 DCCP43146 1447 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 CCDC88BA6NC98 1476 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 IGHV4-28A0A0C4DH34 117 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 A0A1W2PRS3 328 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 MEIS3P1A6NDR6 274 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 IFITM10A6NMD0 228 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 C12orf77C9JDV5 145 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 E9PLD3 99 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 FNDC10F2Z333 226 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 PIRO00625 290 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 SS18L1O75177 396 aaPredicted RBP2.35□□□□□ -2.03
VIM-210ENST00000637053 FCGR3AP08637 254 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 SPINK8P0C7L1 97 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 P0DMU3 169 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 FAM231AP0DMU4 169 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 FAM231CP0DMU5 169 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 CD1DP15813 335 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 PPIBP23284 216 aaKnown RBP2.35□□□□□ -2.03
VIM-210ENST00000637053 PSMB2P49721 201 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 MFAP2P55001 183 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 CCL23P55773 120 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 GFERP55789 205 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 ARPP19P56211 112 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 TAS2R46P59540 309 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 PRR3P79522 188 aaKnown RBP2.35□□□□□ -2.03
VIM-210ENST00000637053 DEFA5Q01523 94 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 CATR1Q13166 79 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 KLF9Q13886 244 aaPredicted RBP2.35□□□□□ -2.03
VIM-210ENST00000637053 ZNF146Q15072 292 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 KLF17Q5JT82 389 aaPredicted RBP2.35□□□□□ -2.03
VIM-210ENST00000637053 FAM222AQ5U5X8 452 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 FAM219BQ5XKK7 198 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 KDM4DQ6B0I6 523 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 EIF5AL1Q6IS14 154 aaKnown RBP2.35□□□□□ -2.03
VIM-210ENST00000637053 Q6Q795 121 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 ACP7Q6ZNF0 438 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 TMUB2Q71RG4 321 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 ZNF571Q7Z3V5 609 aaPredicted RBP2.35□□□□□ -2.03
VIM-210ENST00000637053 ATP5L2Q7Z4Y8 100 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 TRPT1Q86TN4 253 aaKnown RBP2.35□□□□□ -2.03
VIM-210ENST00000637053 TTC9CQ8N5M4 171 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 ZDHHC22Q8N966 263 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 ZNRF1Q8ND25 227 aa2.35□□□□□ -2.03
VIM-210ENST00000637053 IGFBPL1Q8WX77 278 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms