RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 ABHD12Q8N2K0 398 aa15.63■□□□□ 0.09
CLN5-216ENST00000636780 GCM1Q9NP62 436 aa15.63■□□□□ 0.09
CLN5-216ENST00000636780 PTPRQQ9UMZ3 2332 aa15.63■□□□□ 0.09
CLN5-216ENST00000636780 RNF212BA8MTL3 300 aa15.62■□□□□ 0.09
CLN5-216ENST00000636780 LINC00587B1AMM8 73 aa15.62■□□□□ 0.09
CLN5-216ENST00000636780 HBG1P69891 147 aa15.62■□□□□ 0.09
CLN5-216ENST00000636780 HBG2P69892 147 aa15.62■□□□□ 0.09
CLN5-216ENST00000636780 NKX6-1P78426 367 aaPredicted RBP15.62■□□□□ 0.09
CLN5-216ENST00000636780 PRB3Q04118 309 aaPredicted RBP15.62■□□□□ 0.09
CLN5-216ENST00000636780 LFNGQ8NES3 379 aa15.62■□□□□ 0.09
CLN5-216ENST00000636780 LURAP1Q96LR2 239 aa15.62■□□□□ 0.09
CLN5-216ENST00000636780 CXCL1P09341 107 aa15.62■□□□□ 0.09
CLN5-216ENST00000636780 FGF7P21781 194 aa15.62■□□□□ 0.09
CLN5-216ENST00000636780 CLEC12BQ2HXU8 276 aa15.62■□□□□ 0.09
CLN5-216ENST00000636780 ZNF674Q2M3X9 581 aa15.62■□□□□ 0.09
CLN5-216ENST00000636780 SSX3Q99909 188 aa15.62■□□□□ 0.09
CLN5-216ENST00000636780 TET2Q6N021 2002 aaPredicted RBP15.62■□□□□ 0.09
CLN5-216ENST00000636780 A0A0G2JNJ9 132 aa15.61■□□□□ 0.09
CLN5-216ENST00000636780 PMS2P5A8MQ11 134 aa15.61■□□□□ 0.09
CLN5-216ENST00000636780 A8MXE2 369 aa15.61■□□□□ 0.09
CLN5-216ENST00000636780 IFNL4K9M1U5 179 aa15.61■□□□□ 0.09
CLN5-216ENST00000636780 IGHV1-46P01743 117 aa15.61■□□□□ 0.09
CLN5-216ENST00000636780 RAB5AP20339 215 aa15.61■□□□□ 0.09
CLN5-216ENST00000636780 C15orf54Q8N8G6 183 aa15.61■□□□□ 0.09
CLN5-216ENST00000636780 Q9UFV3 132 aa15.61■□□□□ 0.09
CLN5-216ENST00000636780 TGIF2-C20orf24A0A0A6YYL0 155 aa15.61■□□□□ 0.09
CLN5-216ENST00000636780 SMCO3A2RU48 225 aa15.61■□□□□ 0.09
CLN5-216ENST00000636780 PTAFRP25105 342 aa15.61■□□□□ 0.09
CLN5-216ENST00000636780 GLRXP35754 106 aa15.61■□□□□ 0.09
CLN5-216ENST00000636780 CD200P41217 278 aa15.61■□□□□ 0.09
CLN5-216ENST00000636780 IGFL3Q6UXB1 125 aa15.61■□□□□ 0.09
CLN5-216ENST00000636780 DOLPP1Q86YN1 238 aa15.61■□□□□ 0.09
CLN5-216ENST00000636780 LOC102723971A0A1B0GUV8 181 aa15.61■□□□□ 0.09
CLN5-216ENST00000636780 MAP1LC3B2A6NCE7 125 aa15.61■□□□□ 0.09
CLN5-216ENST00000636780 RRHO14718 337 aa15.61■□□□□ 0.09
CLN5-216ENST00000636780 TNFAIP6P98066 277 aaPredicted RBP15.61■□□□□ 0.09
CLN5-216ENST00000636780 FOXC1Q12948 553 aa15.61■□□□□ 0.09
CLN5-216ENST00000636780 CT45A1Q5HYN5 189 aa15.61■□□□□ 0.09
CLN5-216ENST00000636780 ZNF506Q5JVG8 444 aa15.61■□□□□ 0.09
CLN5-216ENST00000636780 CT45A3Q8NHU0 189 aa15.61■□□□□ 0.09
CLN5-216ENST00000636780 MAP1LC3BQ9GZQ8 125 aa15.61■□□□□ 0.09
CLN5-216ENST00000636780 CALYQ9NYX4 217 aa15.61■□□□□ 0.09
CLN5-216ENST00000636780 NDUFS6O75380 124 aaKnown RBP15.6■□□□□ 0.09
CLN5-216ENST00000636780 NQO2P16083 231 aa15.6■□□□□ 0.09
CLN5-216ENST00000636780 C17orf58Q2M2W7 97 aa15.6■□□□□ 0.09
CLN5-216ENST00000636780 ASCL5Q7RTU5 278 aa15.6■□□□□ 0.09
CLN5-216ENST00000636780 LHX4Q969G2 390 aa15.6■□□□□ 0.09
CLN5-216ENST00000636780 IFI27L2Q9H2X8 130 aa15.6■□□□□ 0.09
CLN5-216ENST00000636780 AURKAIP1Q9NWT8 199 aaPredicted RBP15.6■□□□□ 0.09
CLN5-216ENST00000636780 CD40P25942 277 aa15.6■□□□□ 0.09
CLN5-216ENST00000636780 RPS10P46783 165 aaKnown RBP15.6■□□□□ 0.09
CLN5-216ENST00000636780 S100A12P80511 92 aa15.6■□□□□ 0.09
CLN5-216ENST00000636780 RTP5Q14D33 572 aa15.6■□□□□ 0.09
CLN5-216ENST00000636780 MSMO1Q15800 293 aa15.6■□□□□ 0.09
CLN5-216ENST00000636780 PRAMEF5Q5TYX0 476 aa15.6■□□□□ 0.09
CLN5-216ENST00000636780 FAM90A2PQ658T7 463 aa15.6■□□□□ 0.09
CLN5-216ENST00000636780 NEUROG1Q92886 237 aa15.6■□□□□ 0.09
CLN5-216ENST00000636780 FAM122AQ96E09 287 aa15.6■□□□□ 0.09
CLN5-216ENST00000636780 TMEM204Q9BSN7 226 aa15.6■□□□□ 0.09
CLN5-216ENST00000636780 HINT2Q9BX68 163 aa15.6■□□□□ 0.09
CLN5-216ENST00000636780 SLC39A9Q9NUM3 307 aa15.6■□□□□ 0.09
CLN5-216ENST00000636780 RALYQ9UKM9 306 aaKnown RBP15.6■□□□□ 0.09
CLN5-216ENST00000636780 CHD8Q9HCK8 2581 aa15.6■□□□□ 0.09
CLN5-216ENST00000636780 TRAV20A0A0B4J274 112 aa15.59■□□□□ 0.09
CLN5-216ENST00000636780 C1orf196B1AJZ1 125 aa15.59■□□□□ 0.09
CLN5-216ENST00000636780 PPIHO43447 177 aaKnown RBP15.59■□□□□ 0.09
CLN5-216ENST00000636780 DLX1P56177 255 aa15.59■□□□□ 0.09
CLN5-216ENST00000636780 TCF23Q7RTU1 214 aa15.59■□□□□ 0.09
CLN5-216ENST00000636780 COL6A6A6NMZ7 2263 aa15.59■□□□□ 0.09
CLN5-216ENST00000636780 TRAV38-1A0A0B4J264 116 aa15.59■□□□□ 0.09
CLN5-216ENST00000636780 MGST3O14880 152 aa15.59■□□□□ 0.09
CLN5-216ENST00000636780 MT-ND4LP03901 98 aa15.59■□□□□ 0.09
CLN5-216ENST00000636780 KIAA0141Q14154 515 aaPredicted RBP15.59■□□□□ 0.09
CLN5-216ENST00000636780 FFAR4Q5NUL3 377 aa15.59■□□□□ 0.09
CLN5-216ENST00000636780 LYG1Q8N1E2 194 aa15.59■□□□□ 0.09
CLN5-216ENST00000636780 OR5T1Q8NG75 326 aa15.59■□□□□ 0.09
CLN5-216ENST00000636780 OR10P1Q8NGE3 313 aa15.59■□□□□ 0.09
CLN5-216ENST00000636780 Q8WTZ3 238 aa15.59■□□□□ 0.09
CLN5-216ENST00000636780 RND1Q92730 232 aa15.59■□□□□ 0.09
CLN5-216ENST00000636780 SNX22Q96L94 193 aa15.59■□□□□ 0.09
CLN5-216ENST00000636780 BIN3Q9NQY0 253 aa15.59■□□□□ 0.09
CLN5-216ENST00000636780 DYSFO75923 2080 aa15.58■□□□□ 0.09
CLN5-216ENST00000636780 C15orf62A8K5M9 175 aa15.58■□□□□ 0.08
CLN5-216ENST00000636780 LHBP01229 141 aa15.58■□□□□ 0.08
CLN5-216ENST00000636780 WNT2P09544 360 aa15.58■□□□□ 0.08
CLN5-216ENST00000636780 EIF2S3LQ2VIR3 472 aaKnown RBP15.58■□□□□ 0.08
CLN5-216ENST00000636780 NCMAPQ5T1S8 102 aa15.58■□□□□ 0.08
CLN5-216ENST00000636780 SDSLQ96GA7 329 aa15.58■□□□□ 0.08
CLN5-216ENST00000636780 PATZ1Q9HBE1 687 aaKnown RBP15.58■□□□□ 0.08
CLN5-216ENST00000636780 TMPRSS2O15393 492 aa15.58■□□□□ 0.08
CLN5-216ENST00000636780 IFNA10P01566 189 aa15.58■□□□□ 0.08
CLN5-216ENST00000636780 BCL2P10415 239 aa15.58■□□□□ 0.08
CLN5-216ENST00000636780 BTF3P20290 206 aaKnown RBP15.58■□□□□ 0.08
CLN5-216ENST00000636780 SLC16A13Q7RTY0 426 aa15.58■□□□□ 0.08
CLN5-216ENST00000636780 RPUSD4Q96CM3 377 aaKnown RBP15.58■□□□□ 0.08
CLN5-216ENST00000636780 RAI1Q7Z5J4 1906 aaPredicted RBP15.58■□□□□ 0.08
CLN5-216ENST00000636780 PLXNB1O43157 2135 aa15.57■□□□□ 0.08
CLN5-216ENST00000636780 GZMHP20718 246 aa15.57■□□□□ 0.08
CLN5-216ENST00000636780 TMEM41BQ5BJD5 291 aa15.57■□□□□ 0.08
CLN5-216ENST00000636780 CA5BP1Q8WTZ4 195 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms