RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 RGPD1P0DJD0 1748 aa2.29□□□□□ -2.04
CLN5-212ENST00000636602 PEAK1Q9H792 1746 aa2.29□□□□□ -2.04
CLN5-212ENST00000636602 LRP6O75581 1613 aa2.29□□□□□ -2.04
CLN5-212ENST00000636602 SLIT2O94813 1529 aa2.29□□□□□ -2.04
CLN5-212ENST00000636602 CDK12Q9NYV4 1490 aaPredicted RBP2.29□□□□□ -2.04
CLN5-212ENST00000636602 SMG6Q86US8 1419 aaKnown RBP2.29□□□□□ -2.04
CLN5-212ENST00000636602 FLT4P35916 1363 aa2.29□□□□□ -2.04
CLN5-212ENST00000636602 IGKV1D-37A0A075B6S9 117 aa2.29□□□□□ -2.04
CLN5-212ENST00000636602 IGKV2-24A0A0C4DH68 120 aa2.29□□□□□ -2.04
CLN5-212ENST00000636602 LRRN3E7EW58 273 aa2.29□□□□□ -2.04
CLN5-212ENST00000636602 LECT2O14960 151 aa2.29□□□□□ -2.04
CLN5-212ENST00000636602 DENRO43583 198 aaKnown RBP2.29□□□□□ -2.04
CLN5-212ENST00000636602 SYNGR2O43760 224 aa2.29□□□□□ -2.04
CLN5-212ENST00000636602 STK16O75716 305 aa2.29□□□□□ -2.04
CLN5-212ENST00000636602 CRTAPO75718 401 aaPredicted RBP2.29□□□□□ -2.04
CLN5-212ENST00000636602 ATP5G1P05496 136 aa2.29□□□□□ -2.04
CLN5-212ENST00000636602 CRYBA1P05813 215 aa2.29□□□□□ -2.04
CLN5-212ENST00000636602 CXCL2P19875 107 aa2.29□□□□□ -2.04
CLN5-212ENST00000636602 CXCL3P19876 107 aa2.29□□□□□ -2.04
CLN5-212ENST00000636602 OR8G1Q15617 311 aa2.29□□□□□ -2.04
CLN5-212ENST00000636602 OGFRL1Q5TC84 451 aaPredicted RBP2.29□□□□□ -2.04
CLN5-212ENST00000636602 LCN8Q6JVE9 175 aa2.29□□□□□ -2.04
CLN5-212ENST00000636602 CALHM3Q86XJ0 350 aa2.29□□□□□ -2.04
CLN5-212ENST00000636602 HS3ST5Q8IZT8 346 aa2.29□□□□□ -2.04
CLN5-212ENST00000636602 LINC00304Q8N9R0 145 aa2.29□□□□□ -2.04
CLN5-212ENST00000636602 MBOAT7Q96N66 472 aa2.29□□□□□ -2.04
CLN5-212ENST00000636602 RTBDNQ9BSG5 229 aaPredicted RBP2.29□□□□□ -2.04
CLN5-212ENST00000636602 SPZ1Q9BXG8 430 aa2.29□□□□□ -2.04
CLN5-212ENST00000636602 CDCA4Q9BXL8 241 aa2.29□□□□□ -2.04
CLN5-212ENST00000636602 MED28Q9H204 178 aa2.29□□□□□ -2.04
CLN5-212ENST00000636602 MAP1LC3AQ9H492 121 aa2.29□□□□□ -2.04
CLN5-212ENST00000636602 HDGFL3Q9Y3E1 203 aa2.29□□□□□ -2.04
CLN5-212ENST00000636602 PKD1L3Q7Z443 1732 aa2.28□□□□□ -2.04
CLN5-212ENST00000636602 CRB1P82279 1406 aa2.28□□□□□ -2.04
CLN5-212ENST00000636602 ADCY9O60503 1353 aa2.28□□□□□ -2.04
CLN5-212ENST00000636602 CPSF4O95639 269 aaKnown RBP2.28□□□□□ -2.04
CLN5-212ENST00000636602 C8orf88P0DMB2 117 aa2.28□□□□□ -2.04
CLN5-212ENST00000636602 HSPA9P38646 679 aaKnown RBP2.28□□□□□ -2.04
CLN5-212ENST00000636602 MAGOHP61326 146 aaKnown RBP2.28□□□□□ -2.04
CLN5-212ENST00000636602 TMEM267Q0VDI3 215 aaPredicted RBP2.28□□□□□ -2.04
CLN5-212ENST00000636602 ITGB3BPQ13352 177 aaPredicted RBP2.28□□□□□ -2.04
CLN5-212ENST00000636602 PPP1R1AQ13522 171 aa2.28□□□□□ -2.04
CLN5-212ENST00000636602 IHHQ14623 411 aa2.28□□□□□ -2.04
CLN5-212ENST00000636602 PYCR3Q53H96 274 aa2.28□□□□□ -2.04
CLN5-212ENST00000636602 CCDC122Q5T0U0 273 aa2.28□□□□□ -2.04
CLN5-212ENST00000636602 LYPD6Q86Y78 171 aa2.28□□□□□ -2.04
CLN5-212ENST00000636602 PIGXQ8TBF5 258 aa2.28□□□□□ -2.04
CLN5-212ENST00000636602 TMBIM1Q969X1 311 aa2.28□□□□□ -2.04
CLN5-212ENST00000636602 CARHSP1Q9Y2V2 147 aaKnown RBP2.28□□□□□ -2.04
CLN5-212ENST00000636602 DLG5Q8TDM6 1919 aa2.28□□□□□ -2.04
CLN5-212ENST00000636602 SBF2Q86WG5 1849 aa2.28□□□□□ -2.04
CLN5-212ENST00000636602 SHANK3Q9BYB0 1731 aa2.28□□□□□ -2.05
CLN5-212ENST00000636602 THSD7AQ9UPZ6 1657 aa2.28□□□□□ -2.05
CLN5-212ENST00000636602 LRRC37A3O60309 1634 aa2.28□□□□□ -2.05
CLN5-212ENST00000636602 GLI3P10071 1580 aa2.27□□□□□ -2.05
CLN5-212ENST00000636602 PRR14LQ5THK1 2151 aa2.27□□□□□ -2.05
CLN5-212ENST00000636602 BCL9LQ86UU0 1499 aa2.27□□□□□ -2.05
CLN5-212ENST00000636602 NID2Q14112 1375 aa2.27□□□□□ -2.05
CLN5-212ENST00000636602 ZBED9Q6R2W3 1325 aa2.27□□□□□ -2.05
CLN5-212ENST00000636602 TEX50A0A1B0GTY4 177 aa2.27□□□□□ -2.05
CLN5-212ENST00000636602 CXCR6O00574 342 aa2.27□□□□□ -2.05
CLN5-212ENST00000636602 MRASO14807 208 aa2.27□□□□□ -2.05
CLN5-212ENST00000636602 IGLV6-57P01721 117 aa2.27□□□□□ -2.05
CLN5-212ENST00000636602 OPN1SWP03999 348 aa2.27□□□□□ -2.05
CLN5-212ENST00000636602 OR4A8P0C604 315 aa2.27□□□□□ -2.05
CLN5-212ENST00000636602 CDK2P24941 298 aa2.27□□□□□ -2.05
CLN5-212ENST00000636602 OR1E2P47887 323 aa2.27□□□□□ -2.05
CLN5-212ENST00000636602 HERVK_113P63121 156 aa2.27□□□□□ -2.05
CLN5-212ENST00000636602 COQ5Q5HYK3 327 aa2.27□□□□□ -2.05
CLN5-212ENST00000636602 TNFAIP8L2Q6P589 184 aaPredicted RBP2.27□□□□□ -2.05
CLN5-212ENST00000636602 NAA40Q86UY6 237 aa2.27□□□□□ -2.05
CLN5-212ENST00000636602 RNF133Q8WVZ7 376 aa2.27□□□□□ -2.05
CLN5-212ENST00000636602 OR5P3Q8WZ94 311 aa2.27□□□□□ -2.05
CLN5-212ENST00000636602 TM2D3Q9BRN9 247 aa2.27□□□□□ -2.05
CLN5-212ENST00000636602 RGPD3A6NKT7 1758 aaPredicted RBP2.27□□□□□ -2.05
CLN5-212ENST00000636602 RGPD4Q7Z3J3 1758 aa2.27□□□□□ -2.05
CLN5-212ENST00000636602 SCN11AQ9UI33 1791 aa2.27□□□□□ -2.05
CLN5-212ENST00000636602 ITGB4P16144 1822 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 SIPA1L3O60292 1781 aaPredicted RBP2.26□□□□□ -2.05
CLN5-212ENST00000636602 DOT1LQ8TEK3 1739 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 MYO3BQ8WXR4 1341 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 EP400Q96L91 3159 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 NHSQ6T4R5 1651 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 ADAMTS7Q9UKP4 1686 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 TRAV8-1A0A0A6YYK1 113 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 A0A1B0GU33 70 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 A0A1W2PNN7 141 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 LINC00862A6NCI5 91 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 DEDDO75618 318 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 IL6P05231 212 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 AKR1C2P52895 323 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 LINC00313P59037 77 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 MYL6P60660 151 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 CXCR4P61073 352 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 SLC35A2P78381 396 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 GNA13Q14344 377 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 SPIN4Q56A73 249 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 ACSBG2Q5FVE4 666 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 NOXRED1Q6NXP6 359 aa2.26□□□□□ -2.05
CLN5-212ENST00000636602 LRRN1Q6UXK5 716 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms