RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 KHDC3LQ587J8 217 aa12.09□□□□□ -0.47
GABRB3-219ENST00000636466 ZNF788Q6ZQV5 615 aa12.09□□□□□ -0.47
GABRB3-219ENST00000636466 WFDC3Q8IUB2 231 aa12.09□□□□□ -0.47
GABRB3-219ENST00000636466 LINC00869P0C866 280 aa12.09□□□□□ -0.47
GABRB3-219ENST00000636466 ZNF645Q8N7E2 425 aa12.09□□□□□ -0.47
GABRB3-219ENST00000636466 PIEZO2Q9H5I5 2752 aa12.09□□□□□ -0.47
GABRB3-219ENST00000636466 PTPN13Q12923 2485 aa12.09□□□□□ -0.47
GABRB3-219ENST00000636466 ZGRF1Q86YA3 2104 aa12.09□□□□□ -0.47
GABRB3-219ENST00000636466 GFRA3O60609 400 aa12.09□□□□□ -0.47
GABRB3-219ENST00000636466 ORM1P02763 201 aa12.09□□□□□ -0.47
GABRB3-219ENST00000636466 SMIM17P0DL12 118 aa12.09□□□□□ -0.47
GABRB3-219ENST00000636466 SPCS3P61009 180 aa12.09□□□□□ -0.47
GABRB3-219ENST00000636466 VAMP3Q15836 100 aa12.09□□□□□ -0.47
GABRB3-219ENST00000636466 H1FOOQ8IZA3 346 aaPredicted RBP12.09□□□□□ -0.47
GABRB3-219ENST00000636466 POC1AQ8NBT0 407 aa12.09□□□□□ -0.47
GABRB3-219ENST00000636466 GFI1Q99684 422 aa12.09□□□□□ -0.47
GABRB3-219ENST00000636466 GTF3C1Q12789 2109 aa12.09□□□□□ -0.47
GABRB3-219ENST00000636466 C12orf77C9JDV5 145 aa12.09□□□□□ -0.47
GABRB3-219ENST00000636466 SERF2P84101 59 aa12.09□□□□□ -0.47
GABRB3-219ENST00000636466 TNFRSF9Q07011 255 aa12.09□□□□□ -0.47
GABRB3-219ENST00000636466 ZNF273Q14593 569 aa12.09□□□□□ -0.47
GABRB3-219ENST00000636466 HIST3H3Q16695 136 aa12.09□□□□□ -0.47
GABRB3-219ENST00000636466 ACSF3Q4G176 576 aaPredicted RBP12.09□□□□□ -0.47
GABRB3-219ENST00000636466 ABHD17AQ96GS6 310 aa12.09□□□□□ -0.47
GABRB3-219ENST00000636466 CEACAM18A8MTB9 384 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 RND2P52198 227 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 RND3P61587 244 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 EFNB1P98172 346 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 MEF2BQ02080 365 aaPredicted RBP12.08□□□□□ -0.48
GABRB3-219ENST00000636466 LILRB1Q8NHL6 650 aaPredicted RBP12.08□□□□□ -0.48
GABRB3-219ENST00000636466 TMEM171Q8WVE6 324 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 LYRM2Q9NU23 88 aaPredicted RBP12.08□□□□□ -0.48
GABRB3-219ENST00000636466 BMPR1BO00238 502 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 COX5BP10606 129 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 USF1P22415 310 aaPredicted RBP12.08□□□□□ -0.48
GABRB3-219ENST00000636466 RNF151Q2KHN1 245 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 DHRS11Q6UWP2 260 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 SLC2A8Q9NY64 477 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 PIEZO1Q92508 2521 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 FAM90A10PA6NDY2 464 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 FAM90A18PA6NE21 464 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 FAM90A16PA6NEW6 464 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 FAM90A20PA6NIJ5 464 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 FAM90A8PA6NJQ4 464 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 FAM90A7PA6NKC0 464 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 FAM90A22PA8MWA6 464 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 FAM90A12PA8MX19 464 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 FAM90A5PA8MXJ8 464 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 FAM90A23PA8MXZ1 464 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 OR5AL1P0C617 328 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 FAM90A15PP0C7V4 464 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 FAM90A13PP0C7W8 464 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 FAM90A14PP0C7W9 464 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 FAM90A24PP0C7X0 464 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 RPL8P62917 257 aaKnown RBP12.08□□□□□ -0.48
GABRB3-219ENST00000636466 KCNMB1Q16558 191 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 FAM216BQ8N7L0 139 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 WDR31Q8NA23 367 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 C5orf17Q8NAS9 161 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 LHFPL5Q8TAF8 219 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 RSPO3Q9BXY4 272 aaPredicted RBP12.08□□□□□ -0.48
GABRB3-219ENST00000636466 C1RLQ9NZP8 487 aa12.08□□□□□ -0.48
GABRB3-219ENST00000636466 SIP14410 1827 aa12.07□□□□□ -0.48
GABRB3-219ENST00000636466 LOC390937A0A1W2PQ73 354 aa12.07□□□□□ -0.48
GABRB3-219ENST00000636466 CXorf1O96002 111 aa12.07□□□□□ -0.48
GABRB3-219ENST00000636466 TRGC2P03986 189 aa12.07□□□□□ -0.48
GABRB3-219ENST00000636466 IQCJQ1A5X6 159 aa12.07□□□□□ -0.48
GABRB3-219ENST00000636466 NHLRC2Q8NBF2 726 aa12.07□□□□□ -0.48
GABRB3-219ENST00000636466 Q8WTZ3 238 aa12.07□□□□□ -0.48
GABRB3-219ENST00000636466 GUCD1Q96NT3 240 aa12.07□□□□□ -0.48
GABRB3-219ENST00000636466 RNF2Q99496 336 aa12.07□□□□□ -0.48
GABRB3-219ENST00000636466 REPIN1Q9BWE0 567 aaKnown RBP12.07□□□□□ -0.48
GABRB3-219ENST00000636466 C5orf63A6NC05 138 aa12.07□□□□□ -0.48
GABRB3-219ENST00000636466 DNASE2O00115 360 aaPredicted RBP12.07□□□□□ -0.48
GABRB3-219ENST00000636466 P01737 135 aa12.07□□□□□ -0.48
GABRB3-219ENST00000636466 HNRNPA3P51991 378 aaKnown RBP12.07□□□□□ -0.48
GABRB3-219ENST00000636466 NHLH1Q02575 133 aa12.07□□□□□ -0.48
GABRB3-219ENST00000636466 ZFP36L1Q07352 338 aaKnown RBP12.07□□□□□ -0.48
GABRB3-219ENST00000636466 ARFGEF3Q5TH69 2177 aa12.07□□□□□ -0.48
GABRB3-219ENST00000636466 C16orf82Q7Z2V1 217 aa12.07□□□□□ -0.48
GABRB3-219ENST00000636466 RPRMQ9NS64 109 aa12.07□□□□□ -0.48
GABRB3-219ENST00000636466 MFSD2BA6NFX1 497 aa12.07□□□□□ -0.48
GABRB3-219ENST00000636466 MFAP2P55001 183 aa12.07□□□□□ -0.48
GABRB3-219ENST00000636466 C9orf106Q8NAJ2 232 aa12.07□□□□□ -0.48
GABRB3-219ENST00000636466 IGKV1D-8A0A087WSZ0 117 aa12.07□□□□□ -0.48
GABRB3-219ENST00000636466 J3QRE1 110 aa12.07□□□□□ -0.48
GABRB3-219ENST00000636466 PTTG1IPP53801 180 aa12.07□□□□□ -0.48
GABRB3-219ENST00000636466 TCTAP57738 103 aa12.07□□□□□ -0.48
GABRB3-219ENST00000636466 RNF144BQ7Z419 303 aa12.07□□□□□ -0.48
GABRB3-219ENST00000636466 LYZL4Q96KX0 146 aa12.07□□□□□ -0.48
GABRB3-219ENST00000636466 PACRGQ96M98 296 aaPredicted RBP12.07□□□□□ -0.48
GABRB3-219ENST00000636466 TMEM208Q9BTX3 173 aa12.07□□□□□ -0.48
GABRB3-219ENST00000636466 TCF19Q9Y242 345 aa12.07□□□□□ -0.48
GABRB3-219ENST00000636466 IGHV3OR16-10A0A075B7F0 116 aa12.06□□□□□ -0.48
GABRB3-219ENST00000636466 IGHV1-2P23083 117 aa12.06□□□□□ -0.48
GABRB3-219ENST00000636466 CSRP2Q16527 193 aa12.06□□□□□ -0.48
GABRB3-219ENST00000636466 PEAR1Q5VY43 1037 aaPredicted RBP12.06□□□□□ -0.48
GABRB3-219ENST00000636466 DPPA3Q6W0C5 159 aa12.06□□□□□ -0.48
GABRB3-219ENST00000636466 PAQR4Q8N4S7 273 aaPredicted RBP12.06□□□□□ -0.48
GABRB3-219ENST00000636466 RTBDNQ9BSG5 229 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms