RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 C5orf49A4QMS7 147 aa12.96□□□□□ -0.34
CLN8-209ENST00000635970 PHOX2AO14813 284 aa12.96□□□□□ -0.34
CLN8-209ENST00000635970 EPHA1P21709 976 aa12.96□□□□□ -0.34
CLN8-209ENST00000635970 RUNX1Q01196 453 aa12.96□□□□□ -0.34
CLN8-209ENST00000635970 ZNF154Q13106 437 aa12.96□□□□□ -0.34
CLN8-209ENST00000635970 TBC1D28Q2M2D7 210 aa12.96□□□□□ -0.34
CLN8-209ENST00000635970 THNSL2Q86YJ6 484 aa12.96□□□□□ -0.34
CLN8-209ENST00000635970 AGMATQ9BSE5 352 aa12.96□□□□□ -0.34
CLN8-209ENST00000635970 C1QTNF5Q9BXJ0 243 aa12.96□□□□□ -0.34
CLN8-209ENST00000635970 PLK3Q9H4B4 646 aa12.96□□□□□ -0.34
CLN8-209ENST00000635970 CDH20Q9HBT6 801 aa12.96□□□□□ -0.34
CLN8-209ENST00000635970 GNG13Q9P2W3 67 aa12.96□□□□□ -0.34
CLN8-209ENST00000635970 TRBV6-6A0A0A6YYG2 114 aa12.95□□□□□ -0.34
CLN8-209ENST00000635970 RD3LP0DJH9 198 aa12.95□□□□□ -0.34
CLN8-209ENST00000635970 F2RP25116 425 aa12.95□□□□□ -0.34
CLN8-209ENST00000635970 SLC25A26Q70HW3 274 aa12.95□□□□□ -0.34
CLN8-209ENST00000635970 LSM10Q969L4 123 aaKnown RBP12.95□□□□□ -0.34
CLN8-209ENST00000635970 PACRGQ96M98 296 aaPredicted RBP12.95□□□□□ -0.34
CLN8-209ENST00000635970 CABLES2Q9BTV7 478 aa12.95□□□□□ -0.34
CLN8-209ENST00000635970 SRD5A3Q9H8P0 318 aa12.95□□□□□ -0.34
CLN8-209ENST00000635970 PGLYRP1O75594 196 aaPredicted RBP12.94□□□□□ -0.34
CLN8-209ENST00000635970 FABP4P15090 132 aa12.94□□□□□ -0.34
CLN8-209ENST00000635970 WNT5AP41221 380 aa12.94□□□□□ -0.34
CLN8-209ENST00000635970 HBG1P69891 147 aa12.94□□□□□ -0.34
CLN8-209ENST00000635970 HBG2P69892 147 aa12.94□□□□□ -0.34
CLN8-209ENST00000635970 TGIF2LYQ8IUE0 185 aa12.94□□□□□ -0.34
CLN8-209ENST00000635970 TMEM183AQ8IXX5 376 aa12.94□□□□□ -0.34
CLN8-209ENST00000635970 OR10A7Q8NGE5 316 aa12.94□□□□□ -0.34
CLN8-209ENST00000635970 TAAR3PQ9P1P4 343 aa12.94□□□□□ -0.34
CLN8-209ENST00000635970 CEACAM6P40199 344 aa12.94□□□□□ -0.34
CLN8-209ENST00000635970 ERVS71-1P61550 626 aa12.94□□□□□ -0.34
CLN8-209ENST00000635970 GAMTQ14353 236 aa12.94□□□□□ -0.34
CLN8-209ENST00000635970 JOSD1Q15040 202 aaPredicted RBP12.94□□□□□ -0.34
CLN8-209ENST00000635970 MSMPQ1L6U9 139 aa12.94□□□□□ -0.34
CLN8-209ENST00000635970 CALHM1Q8IU99 346 aa12.94□□□□□ -0.34
CLN8-209ENST00000635970 MKXQ8IYA7 352 aa12.94□□□□□ -0.34
CLN8-209ENST00000635970 NUP37Q8NFH4 326 aa12.94□□□□□ -0.34
CLN8-209ENST00000635970 NOL4LQ96MY1 436 aaPredicted RBP12.94□□□□□ -0.34
CLN8-209ENST00000635970 PYGO2Q9BRQ0 406 aa12.94□□□□□ -0.34
CLN8-209ENST00000635970 LAMP3Q9UQV4 416 aa12.94□□□□□ -0.34
CLN8-209ENST00000635970 TEX15Q9BXT5 2789 aa12.93□□□□□ -0.34
CLN8-209ENST00000635970 SCTP09683 121 aa12.93□□□□□ -0.34
CLN8-209ENST00000635970 FGF7P21781 194 aa12.93□□□□□ -0.34
CLN8-209ENST00000635970 Q3ZCU0 254 aa12.93□□□□□ -0.34
CLN8-209ENST00000635970 COA6Q5JTJ3 125 aaKnown RBP12.93□□□□□ -0.34
CLN8-209ENST00000635970 COLCA1Q6ZS62 124 aa12.93□□□□□ -0.34
CLN8-209ENST00000635970 CCL19Q99731 98 aa12.93□□□□□ -0.34
CLN8-209ENST00000635970 HIST1H2BLQ99880 126 aa12.93□□□□□ -0.34
CLN8-209ENST00000635970 ACTR3CQ9C0K3 210 aaPredicted RBP12.93□□□□□ -0.34
CLN8-209ENST00000635970 CCL28Q9NRJ3 127 aa12.93□□□□□ -0.34
CLN8-209ENST00000635970 RPRMQ9NS64 109 aa12.93□□□□□ -0.34
CLN8-209ENST00000635970 NAT8Q9UHE5 227 aa12.93□□□□□ -0.34
CLN8-209ENST00000635970 FZR1Q9UM11 496 aa12.93□□□□□ -0.34
CLN8-209ENST00000635970 NOTCH2Q04721 2471 aa12.93□□□□□ -0.34
CLN8-209ENST00000635970 A0A087X0M5 115 aa12.92□□□□□ -0.34
CLN8-209ENST00000635970 A0A1B0GX30 115 aa12.92□□□□□ -0.34
CLN8-209ENST00000635970 KIAA1324LA8MWY0 1029 aaPredicted RBP12.92□□□□□ -0.34
CLN8-209ENST00000635970 SMPD2O60906 423 aa12.92□□□□□ -0.34
CLN8-209ENST00000635970 SERPINE2P07093 398 aa12.92□□□□□ -0.34
CLN8-209ENST00000635970 COX5BP10606 129 aa12.92□□□□□ -0.34
CLN8-209ENST00000635970 FABP6P51161 128 aa12.92□□□□□ -0.34
CLN8-209ENST00000635970 TAS2R60P59551 318 aa12.92□□□□□ -0.34
CLN8-209ENST00000635970 RAB4BP61018 213 aa12.92□□□□□ -0.34
CLN8-209ENST00000635970 ADIPOQQ15848 244 aa12.92□□□□□ -0.34
CLN8-209ENST00000635970 GFI1BQ5VTD9 330 aa12.92□□□□□ -0.34
CLN8-209ENST00000635970 C20orf204Q6ZNR8 217 aa12.92□□□□□ -0.34
CLN8-209ENST00000635970 OR2W1Q9Y3N9 320 aa12.92□□□□□ -0.34
CLN8-209ENST00000635970 IGKV1D-13A0A0B4J2D9 117 aa12.92□□□□□ -0.34
CLN8-209ENST00000635970 ZFP92A6NM28 416 aa12.92□□□□□ -0.34
CLN8-209ENST00000635970 NGFP01138 241 aa12.92□□□□□ -0.34
CLN8-209ENST00000635970 IGKV1-13P0DP09 117 aa12.92□□□□□ -0.34
CLN8-209ENST00000635970 LRRC75BQ2VPJ9 315 aa12.92□□□□□ -0.34
CLN8-209ENST00000635970 TMEM41BQ5BJD5 291 aa12.92□□□□□ -0.34
CLN8-209ENST00000635970 SPATA46Q5T0L3 261 aa12.92□□□□□ -0.34
CLN8-209ENST00000635970 CDPF1Q6NVV7 123 aa12.92□□□□□ -0.34
CLN8-209ENST00000635970 CENPVQ7Z7K6 275 aaPredicted RBP12.92□□□□□ -0.34
CLN8-209ENST00000635970 MUC15Q8N387 334 aa12.92□□□□□ -0.34
CLN8-209ENST00000635970 RAB24Q969Q5 203 aa12.92□□□□□ -0.34
CLN8-209ENST00000635970 GPR146Q96CH1 333 aa12.92□□□□□ -0.34
CLN8-209ENST00000635970 ACY3Q96HD9 319 aa12.92□□□□□ -0.34
CLN8-209ENST00000635970 C2orf88Q9BSF0 95 aa12.92□□□□□ -0.34
CLN8-209ENST00000635970 TIMM9Q9Y5J7 89 aa12.92□□□□□ -0.34
CLN8-209ENST00000635970 SLC31A2O15432 143 aa12.91□□□□□ -0.34
CLN8-209ENST00000635970 LY86O95711 162 aa12.91□□□□□ -0.34
CLN8-209ENST00000635970 GCGP01275 180 aa12.91□□□□□ -0.34
CLN8-209ENST00000635970 OR4A8P0C604 315 aa12.91□□□□□ -0.34
CLN8-209ENST00000635970 IL2RGP31785 369 aa12.91□□□□□ -0.34
CLN8-209ENST00000635970 MDH2P40926 338 aaKnown RBP12.91□□□□□ -0.34
CLN8-209ENST00000635970 HERPUD1Q15011 391 aa12.91□□□□□ -0.34
CLN8-209ENST00000635970 PDCD1Q15116 288 aa12.91□□□□□ -0.34
CLN8-209ENST00000635970 CYP2G1PQ6ZSU1 146 aa12.91□□□□□ -0.34
CLN8-209ENST00000635970 ARFGEF3Q5TH69 2177 aa12.91□□□□□ -0.34
CLN8-209ENST00000635970 NPIPB11E5RHQ5 1161 aa12.9□□□□□ -0.34
CLN8-209ENST00000635970 TRAPPC2LH3BP13 241 aa12.9□□□□□ -0.34
CLN8-209ENST00000635970 SYNGR2O43760 224 aa12.9□□□□□ -0.34
CLN8-209ENST00000635970 BCL3P20749 454 aa12.9□□□□□ -0.34
CLN8-209ENST00000635970 APOBEC3AP31941 199 aaPredicted RBP12.9□□□□□ -0.34
CLN8-209ENST00000635970 CEACAM21Q3KPI0 293 aa12.9□□□□□ -0.34
CLN8-209ENST00000635970 WDR25Q64LD2 544 aaPredicted RBP12.9□□□□□ -0.34
CLN8-209ENST00000635970 LRP11Q86VZ4 500 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms