RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 MUC15Q8N387 334 aa18.15■□□□□ 0.5
PNKP-220ENST00000627232 LFNGQ8NES3 379 aa18.15■□□□□ 0.5
PNKP-220ENST00000627232 ZNF714Q96N38 554 aa18.15■□□□□ 0.5
PNKP-220ENST00000627232 UQCC1Q9NVA1 299 aa18.15■□□□□ 0.5
PNKP-220ENST00000627232 RNASEK-C17orf49H0YIS7 233 aa18.14■□□□□ 0.49
PNKP-220ENST00000627232 PPIHO43447 177 aaKnown RBP18.14■□□□□ 0.49
PNKP-220ENST00000627232 MMP23AO75900 390 aa18.14■□□□□ 0.49
PNKP-220ENST00000627232 SCAF4O95104 1147 aaKnown RBP18.14■□□□□ 0.49
PNKP-220ENST00000627232 FSTL3O95633 263 aa18.14■□□□□ 0.49
PNKP-220ENST00000627232 SNCAP37840 140 aa18.14■□□□□ 0.49
PNKP-220ENST00000627232 DVL1P1P54792 670 aaPredicted RBP18.14■□□□□ 0.49
PNKP-220ENST00000627232 AKR1C1Q04828 323 aa18.14■□□□□ 0.49
PNKP-220ENST00000627232 HEPN1Q6WQI6 88 aa18.14■□□□□ 0.49
PNKP-220ENST00000627232 C1orf229Q6ZS94 237 aaPredicted RBP18.14■□□□□ 0.49
PNKP-220ENST00000627232 LYG1Q8N1E2 194 aa18.14■□□□□ 0.49
PNKP-220ENST00000627232 SCGB1C1Q8TD33 95 aa18.14■□□□□ 0.49
PNKP-220ENST00000627232 DTD1Q8TEA8 209 aa18.14■□□□□ 0.49
PNKP-220ENST00000627232 CARHSP1Q9Y2V2 147 aaKnown RBP18.14■□□□□ 0.49
PNKP-220ENST00000627232 IGF2RP11717 2491 aa18.14■□□□□ 0.49
PNKP-220ENST00000627232 HCFC1P51610 2035 aa18.13■□□□□ 0.49
PNKP-220ENST00000627232 A0A1W2PPE3 182 aa18.13■□□□□ 0.49
PNKP-220ENST00000627232 FCN3O75636 299 aa18.13■□□□□ 0.49
PNKP-220ENST00000627232 OR9G9P0C7N8 305 aa18.13■□□□□ 0.49
PNKP-220ENST00000627232 LY6DQ14210 128 aa18.13■□□□□ 0.49
PNKP-220ENST00000627232 CDSNQ15517 529 aa18.13■□□□□ 0.49
PNKP-220ENST00000627232 ATP6V1FQ16864 119 aa18.13■□□□□ 0.49
PNKP-220ENST00000627232 HFEQ30201 348 aa18.13■□□□□ 0.49
PNKP-220ENST00000627232 SLC25A24Q6NUK1 477 aa18.13■□□□□ 0.49
PNKP-220ENST00000627232 LYPD2Q6UXB3 125 aa18.13■□□□□ 0.49
PNKP-220ENST00000627232 OR52E5Q8NH55 327 aa18.13■□□□□ 0.49
PNKP-220ENST00000627232 FAM213BQ8TBF2 198 aa18.13■□□□□ 0.49
PNKP-220ENST00000627232 SUN5Q8TC36 379 aa18.13■□□□□ 0.49
PNKP-220ENST00000627232 SEC11CQ9BY50 192 aa18.13■□□□□ 0.49
PNKP-220ENST00000627232 DIDO1Q9BTC0 2240 aaKnown RBP18.13■□□□□ 0.49
PNKP-220ENST00000627232 RBMXL2O75526 392 aaKnown RBP18.13■□□□□ 0.49
PNKP-220ENST00000627232 C1QL1O75973 258 aa18.13■□□□□ 0.49
PNKP-220ENST00000627232 FHITP49789 147 aa18.13■□□□□ 0.49
PNKP-220ENST00000627232 GNG10P50151 68 aa18.13■□□□□ 0.49
PNKP-220ENST00000627232 PPOXP50336 477 aa18.13■□□□□ 0.49
PNKP-220ENST00000627232 LRRC75BQ2VPJ9 315 aa18.13■□□□□ 0.49
PNKP-220ENST00000627232 TMEM200BQ69YZ2 307 aa18.13■□□□□ 0.49
PNKP-220ENST00000627232 LILRB2Q8N423 598 aa18.13■□□□□ 0.49
PNKP-220ENST00000627232 RAB39BQ96DA2 213 aa18.13■□□□□ 0.49
PNKP-220ENST00000627232 PSMG3Q9BT73 122 aaPredicted RBP18.13■□□□□ 0.49
PNKP-220ENST00000627232 LAMA5O15230 3695 aa18.12■□□□□ 0.49
PNKP-220ENST00000627232 CEBPZOSA8MTT3 80 aa18.12■□□□□ 0.49
PNKP-220ENST00000627232 RUNX1Q01196 453 aa18.12■□□□□ 0.49
PNKP-220ENST00000627232 SLC38A11Q08AI6 406 aa18.12■□□□□ 0.49
PNKP-220ENST00000627232 PDLIM3Q53GG5 364 aaPredicted RBP18.12■□□□□ 0.49
PNKP-220ENST00000627232 AKR1C8PQ5T2L2 129 aa18.12■□□□□ 0.49
PNKP-220ENST00000627232 THNSL2Q86YJ6 484 aa18.12■□□□□ 0.49
PNKP-220ENST00000627232 OR4A16Q8NH70 328 aa18.12■□□□□ 0.49
PNKP-220ENST00000627232 OR4C12Q96R67 309 aa18.12■□□□□ 0.49
PNKP-220ENST00000627232 QTRT1Q9BXR0 403 aaKnown RBP18.12■□□□□ 0.49
PNKP-220ENST00000627232 HIPK2Q9H2X6 1198 aa18.12■□□□□ 0.49
PNKP-220ENST00000627232 TMEM231Q9H6L2 316 aa18.12■□□□□ 0.49
PNKP-220ENST00000627232 CTSZQ9UBR2 303 aa18.12■□□□□ 0.49
PNKP-220ENST00000627232 FAM96BQ9Y3D0 163 aa18.12■□□□□ 0.49
PNKP-220ENST00000627232 BTBD17A6NE02 478 aa18.11■□□□□ 0.49
PNKP-220ENST00000627232 F8W036 122 aa18.11■□□□□ 0.49
PNKP-220ENST00000627232 DVL1O14640 695 aa18.11■□□□□ 0.49
PNKP-220ENST00000627232 ADCYAP1P18509 176 aa18.11■□□□□ 0.49
PNKP-220ENST00000627232 SPCS3P61009 180 aa18.11■□□□□ 0.49
PNKP-220ENST00000627232 DEFA5Q01523 94 aa18.11■□□□□ 0.49
PNKP-220ENST00000627232 TFF3Q07654 80 aa18.11■□□□□ 0.49
PNKP-220ENST00000627232 C8orf31Q8N9H6 132 aa18.11■□□□□ 0.49
PNKP-220ENST00000627232 ZNF383Q8NA42 475 aa18.11■□□□□ 0.49
PNKP-220ENST00000627232 MS4A7Q9GZW8 240 aaPredicted RBP18.11■□□□□ 0.49
PNKP-220ENST00000627232 RFNGQ9Y644 331 aa18.11■□□□□ 0.49
PNKP-220ENST00000627232 YLPM1P49750 1951 aaKnown RBP18.11■□□□□ 0.49
PNKP-220ENST00000627232 A0A1B0GW64 132 aa18.1■□□□□ 0.49
PNKP-220ENST00000627232 PMS2P5A8MQ11 134 aa18.1■□□□□ 0.49
PNKP-220ENST00000627232 AGPAT2O15120 278 aa18.1■□□□□ 0.49
PNKP-220ENST00000627232 POU2AF1Q16633 256 aa18.1■□□□□ 0.49
PNKP-220ENST00000627232 SVBPQ8N300 66 aa18.1■□□□□ 0.49
PNKP-220ENST00000627232 H1FXQ92522 213 aaKnown RBP18.1■□□□□ 0.49
PNKP-220ENST00000627232 CCL3L1P16619 93 aa18.09■□□□□ 0.49
PNKP-220ENST00000627232 RELBQ01201 579 aa18.09■□□□□ 0.49
PNKP-220ENST00000627232 PEA15Q15121 130 aa18.09■□□□□ 0.49
PNKP-220ENST00000627232 DHRS7BQ6IAN0 325 aaPredicted RBP18.09■□□□□ 0.49
PNKP-220ENST00000627232 ZNF833PQ6ZTB9 187 aa18.09■□□□□ 0.49
PNKP-220ENST00000627232 ZNF429Q86V71 674 aa18.09■□□□□ 0.49
PNKP-220ENST00000627232 ZDHHC16Q969W1 377 aa18.09■□□□□ 0.49
PNKP-220ENST00000627232 PINX1Q96BK5 328 aaKnown RBP18.09■□□□□ 0.49
PNKP-220ENST00000627232 SCRT1Q9BWW7 348 aa18.09■□□□□ 0.49
PNKP-220ENST00000627232 WDR61Q9GZS3 305 aaKnown RBP18.09■□□□□ 0.49
PNKP-220ENST00000627232 TMEM140Q9NV12 185 aa18.09■□□□□ 0.49
PNKP-220ENST00000627232 TMEM8BA6NDV4 472 aa18.08■□□□□ 0.49
PNKP-220ENST00000627232 HRASP01112 189 aa18.08■□□□□ 0.49
PNKP-220ENST00000627232 SERF2P84101 59 aa18.08■□□□□ 0.49
PNKP-220ENST00000627232 GUK1Q16774 197 aa18.08■□□□□ 0.49
PNKP-220ENST00000627232 SSX9Q7RTT3 188 aa18.08■□□□□ 0.49
PNKP-220ENST00000627232 LINC00311Q8N616 119 aa18.08■□□□□ 0.49
PNKP-220ENST00000627232 ZNF596Q8TC21 504 aa18.08■□□□□ 0.49
PNKP-220ENST00000627232 CLCC1Q96S66 551 aa18.08■□□□□ 0.49
PNKP-220ENST00000627232 PBDC1Q9BVG4 233 aa18.08■□□□□ 0.49
PNKP-220ENST00000627232 TMEM147Q9BVK8 224 aa18.08■□□□□ 0.49
PNKP-220ENST00000627232 TIMM9Q9Y5J7 89 aa18.08■□□□□ 0.49
PNKP-220ENST00000627232 TRBV23-1A0A0A0MS06 115 aa18.08■□□□□ 0.48
PNKP-220ENST00000627232 IFNA17P01571 189 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms