RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 OR9G9P0C7N8 305 aa16.17■□□□□ 0.18
CHRNA4-209ENST00000627000 SAA2P0DJI9 122 aaPredicted RBP16.17■□□□□ 0.18
CHRNA4-209ENST00000627000 EFNB3Q15768 340 aa16.17■□□□□ 0.18
CHRNA4-209ENST00000627000 SSX9Q7RTT3 188 aa16.17■□□□□ 0.18
CHRNA4-209ENST00000627000 CD300LFQ8TDQ1 290 aa16.17■□□□□ 0.18
CHRNA4-209ENST00000627000 FAM216AQ8WUB2 273 aa16.17■□□□□ 0.18
CHRNA4-209ENST00000627000 ZDHHC16Q969W1 377 aa16.17■□□□□ 0.18
CHRNA4-209ENST00000627000 TSNAXQ99598 290 aaKnown RBP16.17■□□□□ 0.18
CHRNA4-209ENST00000627000 ZNRD1Q9P1U0 126 aa16.17■□□□□ 0.18
CHRNA4-209ENST00000627000 LAMP3Q9UQV4 416 aa16.17■□□□□ 0.18
CHRNA4-209ENST00000627000 H7C2Y5 167 aa16.17■□□□□ 0.18
CHRNA4-209ENST00000627000 ITGB1BP1O14713 200 aa16.17■□□□□ 0.18
CHRNA4-209ENST00000627000 RAB7AP51149 207 aa16.17■□□□□ 0.18
CHRNA4-209ENST00000627000 TAS2R30P59541 319 aa16.17■□□□□ 0.18
CHRNA4-209ENST00000627000 VKORC1L1Q8N0U8 176 aa16.17■□□□□ 0.18
CHRNA4-209ENST00000627000 FAM213BQ8TBF2 198 aa16.17■□□□□ 0.18
CHRNA4-209ENST00000627000 ZNF251Q9BRH9 671 aa16.17■□□□□ 0.18
CHRNA4-209ENST00000627000 PRORYQ9H606 182 aa16.17■□□□□ 0.18
CHRNA4-209ENST00000627000 LINC00574Q9H8X3 128 aa16.17■□□□□ 0.18
CHRNA4-209ENST00000627000 hADV38S2A0JD32 116 aa16.16■□□□□ 0.18
CHRNA4-209ENST00000627000 B9A039 149 aa16.16■□□□□ 0.18
CHRNA4-209ENST00000627000 TNFRSF13BO14836 293 aaPredicted RBP16.16■□□□□ 0.18
CHRNA4-209ENST00000627000 ZG16O60844 167 aa16.16■□□□□ 0.18
CHRNA4-209ENST00000627000 RBMXL2O75526 392 aaKnown RBP16.16■□□□□ 0.18
CHRNA4-209ENST00000627000 HPRT1P00492 218 aa16.16■□□□□ 0.18
CHRNA4-209ENST00000627000 LYG1Q8N1E2 194 aa16.16■□□□□ 0.18
CHRNA4-209ENST00000627000 CA5BP1Q8WTZ4 195 aa16.16■□□□□ 0.18
CHRNA4-209ENST00000627000 CTSZQ9UBR2 303 aa16.16■□□□□ 0.18
CHRNA4-209ENST00000627000 KLF2Q9Y5W3 355 aaPredicted RBP16.16■□□□□ 0.18
CHRNA4-209ENST00000627000 LINC00312Q9Y6C7 94 aa16.16■□□□□ 0.18
CHRNA4-209ENST00000627000 TSPAN15O95858 294 aa16.16■□□□□ 0.18
CHRNA4-209ENST00000627000 CCL3L1P16619 93 aa16.16■□□□□ 0.18
CHRNA4-209ENST00000627000 RAB5CP51148 216 aa16.16■□□□□ 0.18
CHRNA4-209ENST00000627000 OR2B8PP59922 312 aa16.16■□□□□ 0.18
CHRNA4-209ENST00000627000 RPL31P62899 125 aaKnown RBP16.16■□□□□ 0.18
CHRNA4-209ENST00000627000 CTAG1AP78358 180 aa16.16■□□□□ 0.18
CHRNA4-209ENST00000627000 ZNF525Q8N782 197 aa16.16■□□□□ 0.18
CHRNA4-209ENST00000627000 DDB2Q92466 427 aa16.16■□□□□ 0.18
CHRNA4-209ENST00000627000 UQCC1Q9NVA1 299 aa16.16■□□□□ 0.18
CHRNA4-209ENST00000627000 RPUSD1Q9UJJ7 312 aaKnown RBP16.16■□□□□ 0.18
CHRNA4-209ENST00000627000 STRAPQ9Y3F4 350 aaKnown RBP16.16■□□□□ 0.18
CHRNA4-209ENST00000627000 A0A1B0GV50 99 aa16.15■□□□□ 0.18
CHRNA4-209ENST00000627000 C9JQL5 133 aa16.15■□□□□ 0.18
CHRNA4-209ENST00000627000 DFFBO76075 338 aa16.15■□□□□ 0.18
CHRNA4-209ENST00000627000 SVBPQ8N300 66 aa16.15■□□□□ 0.18
CHRNA4-209ENST00000627000 OR4C12Q96R67 309 aa16.15■□□□□ 0.18
CHRNA4-209ENST00000627000 S1PR3Q99500 378 aa16.15■□□□□ 0.18
CHRNA4-209ENST00000627000 QTRT1Q9BXR0 403 aaKnown RBP16.15■□□□□ 0.18
CHRNA4-209ENST00000627000 GAB2Q9UQC2 676 aa16.15■□□□□ 0.18
CHRNA4-209ENST00000627000 RNASEK-C17orf49H0YIS7 233 aa16.14■□□□□ 0.17
CHRNA4-209ENST00000627000 MRPS11P82912 194 aaKnown RBP16.14■□□□□ 0.17
CHRNA4-209ENST00000627000 TMEM14EPQ6UXP3 125 aa16.14■□□□□ 0.17
CHRNA4-209ENST00000627000 IGHV1-69-2A0A0G2JMI3 117 aa16.14■□□□□ 0.17
CHRNA4-209ENST00000627000 LYNX1G3V0Z9 82 aa16.14■□□□□ 0.17
CHRNA4-209ENST00000627000 LYNX1P0DP58 116 aa16.14■□□□□ 0.17
CHRNA4-209ENST00000627000 RPS16P62249 146 aaKnown RBP16.14■□□□□ 0.17
CHRNA4-209ENST00000627000 TMEM200BQ69YZ2 307 aa16.14■□□□□ 0.17
CHRNA4-209ENST00000627000 OR8G2PQ6IF36 304 aa16.14■□□□□ 0.17
CHRNA4-209ENST00000627000 THNSL2Q86YJ6 484 aa16.14■□□□□ 0.17
CHRNA4-209ENST00000627000 MUC15Q8N387 334 aa16.14■□□□□ 0.17
CHRNA4-209ENST00000627000 DTD1Q8TEA8 209 aa16.14■□□□□ 0.17
CHRNA4-209ENST00000627000 H1FXQ92522 213 aaKnown RBP16.14■□□□□ 0.17
CHRNA4-209ENST00000627000 GNPNAT1Q96EK6 184 aaPredicted RBP16.14■□□□□ 0.17
CHRNA4-209ENST00000627000 FBXO7Q9Y3I1 522 aa16.14■□□□□ 0.17
CHRNA4-209ENST00000627000 ANKHD1Q8IWZ3 2542 aaKnown RBP16.14■□□□□ 0.17
CHRNA4-209ENST00000627000 F8W036 122 aa16.13■□□□□ 0.17
CHRNA4-209ENST00000627000 IFNA5P01569 189 aa16.13■□□□□ 0.17
CHRNA4-209ENST00000627000 CD5P06127 495 aa16.13■□□□□ 0.17
CHRNA4-209ENST00000627000 SNCAP37840 140 aa16.13■□□□□ 0.17
CHRNA4-209ENST00000627000 GUCA2BQ16661 112 aa16.13■□□□□ 0.17
CHRNA4-209ENST00000627000 SLC25A24Q6NUK1 477 aa16.13■□□□□ 0.17
CHRNA4-209ENST00000627000 RSG1Q9BU20 258 aa16.13■□□□□ 0.17
CHRNA4-209ENST00000627000 TRAV3A0A0B4J244 114 aa16.13■□□□□ 0.17
CHRNA4-209ENST00000627000 RBFOX2O43251 390 aaKnown RBP eCLIP16.13■□□□□ 0.17
CHRNA4-209ENST00000627000 H2AFB1P0C5Y9 115 aa16.13■□□□□ 0.17
CHRNA4-209ENST00000627000 LOXP28300 417 aaPredicted RBP16.13■□□□□ 0.17
CHRNA4-209ENST00000627000 LILRB2Q8N423 598 aa16.13■□□□□ 0.17
CHRNA4-209ENST00000627000 ZNF383Q8NA42 475 aa16.13■□□□□ 0.17
CHRNA4-209ENST00000627000 MLXQ9UH92 298 aa16.13■□□□□ 0.17
CHRNA4-209ENST00000627000 CEBPZOSA8MTT3 80 aa16.12■□□□□ 0.17
CHRNA4-209ENST00000627000 DVL1O14640 695 aa16.12■□□□□ 0.17
CHRNA4-209ENST00000627000 NDUFB3O43676 98 aa16.12■□□□□ 0.17
CHRNA4-209ENST00000627000 F12P00748 615 aaPredicted RBP16.12■□□□□ 0.17
CHRNA4-209ENST00000627000 HOXA1P49639 335 aaPredicted RBP16.12■□□□□ 0.17
CHRNA4-209ENST00000627000 HBG1P69891 147 aa16.12■□□□□ 0.17
CHRNA4-209ENST00000627000 HBG2P69892 147 aa16.12■□□□□ 0.17
CHRNA4-209ENST00000627000 MEF2CQ06413 473 aaPredicted RBP16.12■□□□□ 0.17
CHRNA4-209ENST00000627000 ZNF672Q499Z4 452 aaPredicted RBP16.12■□□□□ 0.17
CHRNA4-209ENST00000627000 SLC25A48Q6ZT89 311 aaKnown RBP16.12■□□□□ 0.17
CHRNA4-209ENST00000627000 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.12■□□□□ 0.17
CHRNA4-209ENST00000627000 TET2Q6N021 2002 aaPredicted RBP16.12■□□□□ 0.17
CHRNA4-209ENST00000627000 FAM74A7A6NL05 159 aa16.11■□□□□ 0.17
CHRNA4-209ENST00000627000 FAM74A3Q4VXF1 159 aa16.11■□□□□ 0.17
CHRNA4-209ENST00000627000 ZNF714Q96N38 554 aa16.11■□□□□ 0.17
CHRNA4-209ENST00000627000 SCRT1Q9BWW7 348 aa16.11■□□□□ 0.17
CHRNA4-209ENST00000627000 GAL3ST2Q9H3Q3 398 aa16.11■□□□□ 0.17
CHRNA4-209ENST00000627000 SAV1Q9H4B6 383 aaPredicted RBP16.11■□□□□ 0.17
CHRNA4-209ENST00000627000 UMAD1C9J7I0 102 aa16.11■□□□□ 0.17
CHRNA4-209ENST00000627000 GPR37O15354 613 aa16.11■□□□□ 0.17
CHRNA4-209ENST00000627000 SLC38A11Q08AI6 406 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms