RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 OR10A7Q8NGE5 316 aa10.14□□□□□ -0.79
PNKP-217ENST00000625216 NAA60Q9H7X0 242 aa10.14□□□□□ -0.79
PNKP-217ENST00000625216 PRR13Q9NZ81 148 aa10.14□□□□□ -0.79
PNKP-217ENST00000625216 RNF150Q9ULK6 438 aa10.14□□□□□ -0.79
PNKP-217ENST00000625216 PSG11Q9UQ72 335 aa10.14□□□□□ -0.79
PNKP-217ENST00000625216 RBM7Q9Y580 266 aaKnown RBP10.14□□□□□ -0.79
PNKP-217ENST00000625216 HILPDAQ9Y5L2 63 aa10.14□□□□□ -0.79
PNKP-217ENST00000625216 A0A087X0M5 115 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 A0A1B0GX30 115 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 A0A1W2PPE3 182 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 LEUTXA8MZ59 168 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 TOR1AO14656 332 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 ITGB1BP1O14713 200 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 CHST1O43916 411 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 RGS11O94810 467 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 IGLV1-47P01700 117 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 TRAPPC2P0DI81 140 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 TRAPPC2BP0DI82 140 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 BRS3P32247 399 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 CEACAM3P40198 252 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 GNG10P50151 68 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 PRRX1P54821 245 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 CD300CQ08708 224 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 EIF4EBP1Q13541 118 aaPredicted RBP10.13□□□□□ -0.79
PNKP-217ENST00000625216 C2orf68Q2NKX9 166 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 CT45A1Q5HYN5 189 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 LY6G6FQ5SQ64 297 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 LPCAT3Q6P1A2 487 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 DRAM1Q8N682 238 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 ZNF645Q8N7E2 425 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 CCDC71LQ8N9Z2 235 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 BVESQ8NE79 360 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 OR4P4Q8NGL7 312 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 CT45A3Q8NHU0 189 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 CASTOR1Q8WTX7 329 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 RTN4IP1Q8WWV3 396 aaPredicted RBP10.13□□□□□ -0.79
PNKP-217ENST00000625216 EDARADDQ8WWZ3 215 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 ABHD14BQ96IU4 210 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 NEURL2Q9BR09 285 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 AGMATQ9BSE5 352 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 ABHD14AQ9BUJ0 271 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 PRSS22Q9GZN4 317 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 SIGLEC9Q9Y336 463 aa10.13□□□□□ -0.79
PNKP-217ENST00000625216 OOSP1A8MZH6 123 aa10.12□□□□□ -0.79
PNKP-217ENST00000625216 TNFSF12O43508 249 aa10.12□□□□□ -0.79
PNKP-217ENST00000625216 PGLYRP1O75594 196 aaPredicted RBP10.12□□□□□ -0.79
PNKP-217ENST00000625216 SULT1A3P0DMM9 295 aa10.12□□□□□ -0.79
PNKP-217ENST00000625216 SULT1A4P0DMN0 295 aa10.12□□□□□ -0.79
PNKP-217ENST00000625216 MSMO1Q15800 293 aa10.12□□□□□ -0.79
PNKP-217ENST00000625216 ANKRD55Q3KP44 614 aa10.12□□□□□ -0.79
PNKP-217ENST00000625216 Q3ZCU0 254 aa10.12□□□□□ -0.79
PNKP-217ENST00000625216 LIN54Q6MZP7 749 aa10.12□□□□□ -0.79
PNKP-217ENST00000625216 C16orf82Q7Z2V1 217 aa10.12□□□□□ -0.79
PNKP-217ENST00000625216 TBC1D26Q86UD7 250 aa10.12□□□□□ -0.79
PNKP-217ENST00000625216 SGPP2Q8IWX5 399 aa10.12□□□□□ -0.79
PNKP-217ENST00000625216 C12orf45Q8N5I9 185 aaPredicted RBP10.12□□□□□ -0.79
PNKP-217ENST00000625216 OR2AK2Q8NG84 335 aa10.12□□□□□ -0.79
PNKP-217ENST00000625216 OR11H7Q8NGC8 314 aa10.12□□□□□ -0.79
PNKP-217ENST00000625216 CFHR4Q92496 578 aa10.12□□□□□ -0.79
PNKP-217ENST00000625216 AKR1E2Q96JD6 320 aa10.12□□□□□ -0.79
PNKP-217ENST00000625216 MED28Q9H204 178 aa10.12□□□□□ -0.79
PNKP-217ENST00000625216 CMYA5Q8N3K9 4069 aa10.12□□□□□ -0.79
PNKP-217ENST00000625216 TEX13DA0A0J9YY54 714 aaPredicted RBP10.11□□□□□ -0.79
PNKP-217ENST00000625216 BUB1B-PAK6H3BSN5 160 aa10.11□□□□□ -0.79
PNKP-217ENST00000625216 MPPED1O15442 326 aa10.11□□□□□ -0.79
PNKP-217ENST00000625216 SSNA1O43805 119 aa10.11□□□□□ -0.79
PNKP-217ENST00000625216 PROP1O75360 226 aa10.11□□□□□ -0.79
PNKP-217ENST00000625216 DUS4LO95620 317 aaKnown RBP10.11□□□□□ -0.79
PNKP-217ENST00000625216 OR5AC1P0C628 307 aa10.11□□□□□ -0.79
PNKP-217ENST00000625216 TMEM187Q14656 261 aa10.11□□□□□ -0.79
PNKP-217ENST00000625216 HLA-DRB5Q30154 266 aa10.11□□□□□ -0.79
PNKP-217ENST00000625216 CCDC144NLQ6NUI1 221 aa10.11□□□□□ -0.79
PNKP-217ENST00000625216 SLC25A48Q6ZT89 311 aaKnown RBP10.11□□□□□ -0.79
PNKP-217ENST00000625216 TMEM219Q86XT9 240 aa10.11□□□□□ -0.79
PNKP-217ENST00000625216 ODF3L1Q8IXM7 274 aa10.11□□□□□ -0.79
PNKP-217ENST00000625216 KLHDC1Q8N7A1 406 aa10.11□□□□□ -0.79
PNKP-217ENST00000625216 OR9G1Q8NH87 305 aa10.11□□□□□ -0.79
PNKP-217ENST00000625216 MITD1Q8WV92 249 aa10.11□□□□□ -0.79
PNKP-217ENST00000625216 GALNT14Q96FL9 552 aa10.11□□□□□ -0.79
PNKP-217ENST00000625216 TP53RKQ96S44 253 aa10.11□□□□□ -0.79
PNKP-217ENST00000625216 ZNF702PQ9H963 129 aa10.11□□□□□ -0.79
PNKP-217ENST00000625216 SERTAD4Q9NUC0 356 aa10.11□□□□□ -0.79
PNKP-217ENST00000625216 SDHAF2Q9NX18 166 aa10.11□□□□□ -0.79
PNKP-217ENST00000625216 WNK1Q9H4A3 2382 aa10.1□□□□□ -0.79
PNKP-217ENST00000625216 VWFP04275 2813 aa10.1□□□□□ -0.79
PNKP-217ENST00000625216 CXCL3P19876 107 aa10.1□□□□□ -0.79
PNKP-217ENST00000625216 GPR12P47775 334 aa10.1□□□□□ -0.79
PNKP-217ENST00000625216 RAB7AP51149 207 aa10.1□□□□□ -0.79
PNKP-217ENST00000625216 RPL30P62888 115 aaKnown RBP10.1□□□□□ -0.79
PNKP-217ENST00000625216 SP6Q3SY56 376 aa10.1□□□□□ -0.79
PNKP-217ENST00000625216 RPL39P5Q59GN2 51 aa10.1□□□□□ -0.79
PNKP-217ENST00000625216 AKAP14Q86UN6 197 aa10.1□□□□□ -0.79
PNKP-217ENST00000625216 CMTM1Q8IZ96 169 aa10.1□□□□□ -0.79
PNKP-217ENST00000625216 OR51H1Q8NH63 302 aa10.1□□□□□ -0.79
PNKP-217ENST00000625216 LHFPL5Q8TAF8 219 aa10.1□□□□□ -0.79
PNKP-217ENST00000625216 MGAT4CQ9UBM8 478 aa10.1□□□□□ -0.79
PNKP-217ENST00000625216 AMMECR1Q9Y4X0 333 aaPredicted RBP10.1□□□□□ -0.79
PNKP-217ENST00000625216 SAA2-SAA4A0A096LPE2 208 aa10.09□□□□□ -0.79
PNKP-217ENST00000625216 A0A0B4J2A0 478 aa10.09□□□□□ -0.79
PNKP-217ENST00000625216 C3orf85A0A1B0GTC6 90 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms