RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 ZG16O60844 167 aa12.81□□□□□ -0.36
PMS1-221ENST00000624204 ZNF253O75346 499 aa12.81□□□□□ -0.36
PMS1-221ENST00000624204 SYNGR4O95473 234 aa12.81□□□□□ -0.36
PMS1-221ENST00000624204 TCTAP57738 103 aa12.81□□□□□ -0.36
PMS1-221ENST00000624204 SPATA46Q5T0L3 261 aa12.81□□□□□ -0.36
PMS1-221ENST00000624204 QTRT1Q9BXR0 403 aaKnown RBP12.81□□□□□ -0.36
PMS1-221ENST00000624204 DEFB126Q9BYW3 111 aa12.81□□□□□ -0.36
PMS1-221ENST00000624204 ZFAND5O76080 213 aa12.8□□□□□ -0.36
PMS1-221ENST00000624204 FXYD3Q14802 87 aa12.8□□□□□ -0.36
PMS1-221ENST00000624204 FBLN7Q53RD9 439 aa12.8□□□□□ -0.36
PMS1-221ENST00000624204 OR8I2Q8N0Y5 310 aa12.8□□□□□ -0.36
PMS1-221ENST00000624204 CRIM1Q9NZV1 1036 aa12.8□□□□□ -0.36
PMS1-221ENST00000624204 CTRLP40313 264 aa12.8□□□□□ -0.36
PMS1-221ENST00000624204 DPRXA6NFQ7 191 aa12.79□□□□□ -0.36
PMS1-221ENST00000624204 TRIM61Q5EBN2 209 aa12.79□□□□□ -0.36
PMS1-221ENST00000624204 MRPL54Q6P161 138 aaKnown RBP12.79□□□□□ -0.36
PMS1-221ENST00000624204 FOXL2NBQ6ZUU3 175 aa12.79□□□□□ -0.36
PMS1-221ENST00000624204 ZIC4Q8N9L1 334 aa12.79□□□□□ -0.36
PMS1-221ENST00000624204 OR5A2Q8NGI9 324 aa12.79□□□□□ -0.36
PMS1-221ENST00000624204 RCHY1Q96PM5 261 aa12.79□□□□□ -0.36
PMS1-221ENST00000624204 YLPM1P49750 1951 aaKnown RBP12.79□□□□□ -0.36
PMS1-221ENST00000624204 DUSP3P51452 185 aaPredicted RBP12.79□□□□□ -0.36
PMS1-221ENST00000624204 CEACAM16Q2WEN9 425 aa12.79□□□□□ -0.36
PMS1-221ENST00000624204 KLHDC1Q8N7A1 406 aa12.79□□□□□ -0.36
PMS1-221ENST00000624204 SPACA9Q96E40 222 aaPredicted RBP12.79□□□□□ -0.36
PMS1-221ENST00000624204 UHRF2Q96PU4 802 aa12.79□□□□□ -0.36
PMS1-221ENST00000624204 SLC35D1Q9NTN3 355 aa12.79□□□□□ -0.36
PMS1-221ENST00000624204 C17orf112F2Z3M2 114 aa12.79□□□□□ -0.36
PMS1-221ENST00000624204 HES3Q5TGS1 186 aa12.79□□□□□ -0.36
PMS1-221ENST00000624204 C7orf61Q8IZ16 206 aa12.79□□□□□ -0.36
PMS1-221ENST00000624204 TCTEX1D1Q8N7M0 179 aa12.79□□□□□ -0.36
PMS1-221ENST00000624204 Q8N976 141 aa12.79□□□□□ -0.36
PMS1-221ENST00000624204 TSTD1Q8NFU3 115 aa12.79□□□□□ -0.36
PMS1-221ENST00000624204 GCM1Q9NP62 436 aa12.79□□□□□ -0.36
PMS1-221ENST00000624204 KCNIP2Q9NS61 270 aa12.79□□□□□ -0.36
PMS1-221ENST00000624204 DEPPQ9NTK1 212 aa12.79□□□□□ -0.36
PMS1-221ENST00000624204 TMEM38BQ9NVV0 291 aa12.79□□□□□ -0.36
PMS1-221ENST00000624204 VAMP5O95183 116 aa12.78□□□□□ -0.36
PMS1-221ENST00000624204 C3orf79P0CE67 100 aa12.78□□□□□ -0.36
PMS1-221ENST00000624204 MGST1P10620 155 aaKnown RBP12.78□□□□□ -0.36
PMS1-221ENST00000624204 TSPOP30536 169 aa12.78□□□□□ -0.36
PMS1-221ENST00000624204 C1orf53Q5VUE5 145 aa12.78□□□□□ -0.36
PMS1-221ENST00000624204 IL36BQ9NZH7 164 aa12.78□□□□□ -0.36
PMS1-221ENST00000624204 RAMP3O60896 148 aa12.78□□□□□ -0.36
PMS1-221ENST00000624204 ARL14EPLP0DKL9 152 aa12.78□□□□□ -0.36
PMS1-221ENST00000624204 CA6P23280 308 aa12.78□□□□□ -0.36
PMS1-221ENST00000624204 CFHR1Q03591 330 aa12.78□□□□□ -0.36
PMS1-221ENST00000624204 SSMEM1Q8WWF3 244 aa12.78□□□□□ -0.36
PMS1-221ENST00000624204 OR2H1Q9GZK4 316 aa12.78□□□□□ -0.36
PMS1-221ENST00000624204 A0A1W2PPC4 97 aa12.78□□□□□ -0.36
PMS1-221ENST00000624204 ACTL6BO94805 426 aa12.78□□□□□ -0.36
PMS1-221ENST00000624204 TIAF1O95411 115 aa12.78□□□□□ -0.36
PMS1-221ENST00000624204 TFF1P04155 84 aa12.78□□□□□ -0.36
PMS1-221ENST00000624204 ESDP10768 282 aa12.78□□□□□ -0.36
PMS1-221ENST00000624204 EPHA8P29322 1005 aaPredicted RBP12.78□□□□□ -0.36
PMS1-221ENST00000624204 LDLRAD2Q5SZI1 272 aa12.78□□□□□ -0.36
PMS1-221ENST00000624204 MMD2Q8IY49 270 aa12.78□□□□□ -0.36
PMS1-221ENST00000624204 BORCS7Q96B45 105 aa12.78□□□□□ -0.36
PMS1-221ENST00000624204 FOXB1Q99853 325 aa12.78□□□□□ -0.36
PMS1-221ENST00000624204 EML6Q6ZMW3 1958 aa12.78□□□□□ -0.36
PMS1-221ENST00000624204 A0A0J9YW62 118 aa12.77□□□□□ -0.36
PMS1-221ENST00000624204 A8MXE2 369 aa12.77□□□□□ -0.36
PMS1-221ENST00000624204 NTF4P34130 210 aa12.77□□□□□ -0.36
PMS1-221ENST00000624204 TMEM240Q5SV17 173 aa12.77□□□□□ -0.36
PMS1-221ENST00000624204 PLXDC1Q8IUK5 500 aa12.77□□□□□ -0.36
PMS1-221ENST00000624204 LOXL4Q96JB6 756 aa12.77□□□□□ -0.36
PMS1-221ENST00000624204 HINT2Q9BX68 163 aa12.77□□□□□ -0.36
PMS1-221ENST00000624204 TRAPPC2LQ9UL33 140 aa12.77□□□□□ -0.36
PMS1-221ENST00000624204 DEFB108AA8MXU0 73 aa12.77□□□□□ -0.37
PMS1-221ENST00000624204 K7EP13 123 aa12.77□□□□□ -0.37
PMS1-221ENST00000624204 SPOCK3Q9BQ16 436 aa12.77□□□□□ -0.37
PMS1-221ENST00000624204 FGF23Q9GZV9 251 aaPredicted RBP12.77□□□□□ -0.37
PMS1-221ENST00000624204 IGHV2OR16-5A0A0B4J2B6 119 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 FAM90A10PA6NDY2 464 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 FAM90A18PA6NE21 464 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 FAM90A16PA6NEW6 464 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 FAM90A20PA6NIJ5 464 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 FAM90A8PA6NJQ4 464 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 FAM90A7PA6NKC0 464 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 FAM90A22PA8MWA6 464 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 FAM90A12PA8MX19 464 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 FAM90A5PA8MXJ8 464 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 FAM90A23PA8MXZ1 464 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 IGLV2-14P01704 120 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 FAM90A15PP0C7V4 464 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 FAM90A13PP0C7W8 464 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 FAM90A14PP0C7W9 464 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 FAM90A24PP0C7X0 464 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 GFRA1P56159 465 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 RELBQ01201 579 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 Q56UQ5 140 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 AAED1Q7RTV5 226 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 NHLRC2Q8NBF2 726 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 SRXN1Q9BYN0 137 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 ZNF391Q9UJN7 358 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 IGHV1OR21-1A0A087WYE8 117 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 DEGS1O15121 323 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 TNFSF4P23510 183 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 SRIP30626 198 aa12.76□□□□□ -0.37
PMS1-221ENST00000624204 Q0VG73 95 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms